FFCP PHASE1:Hg19::chr10:17496222..17496244,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:17496222..17496244,-
|short_description=p4@ST8SIA6
|description=CAGE_peak_4_at_ST8SIA6_5end
|association_with_transcript=9bp_to_uc010qce.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=338596 | |EntrezGene=338596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23317 | |HGNC=23317 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_uc010qce.1_5end | |||
|cluster_id=chr10:17496222..17496244,- | |||
|description=CAGE_peak_4_at_ST8SIA6_5end | |||
|id=chr10:17496222..17496244,- | |||
|ontology_enrichment_celltype=CL:0000148!3.69e-08!10;CL:0000541!3.69e-08!10;CL:0000988!2.02e-07!182;CL:0000037!2.36e-07!172;CL:0000566!2.36e-07!172;CL:0002274!6.81e-07!5;CL:0000457!6.81e-07!5;CL:0002191!6.81e-07!5;CL:0000097!6.81e-07!5;CL:0000831!6.81e-07!5;CL:0002028!6.81e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.11e-19;5!CL:0000623;1.34e-12;3!CL:0000163;1.46e-10;9!CL:0000148;2.09e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.60e-19,5;CL:0002028,3.60e-19,5;CL:0000763,7.27e-15,108;CL:0000049,7.27e-15,108;CL:0000037,1.29e-13,168;CL:0002032,2.43e-13,161;CL:0000837,2.43e-13,161;CL:0000623,9.32e-13,3;CL:0000825,9.32e-13,3;CL:0000988,1.44e-12,177;CL:0000163,1.58e-10,9;CL:0000148,2.81e-09,10;CL:0000541,2.81e-09,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.94e-11!31;DOID:1240!2.35e-10!39;DOID:1036!5.08e-07!8;DOID:2531!5.10e-07!51;DOID:0060083!5.10e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.57e-32;31!DOID:1240;4.50e-19;39!DOID:1036;1.17e-16;8!DOID:2531;1.77e-12;51!DOID:0060083;1.77e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.01e-33,31;DOID:1240,1.91e-25,39;DOID:2531,1.85e-18,51;DOID:0060083,1.85e-18,51;DOID:1036,5.84e-17,8;DOID:0050686,1.86e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.46e-13!115;UBERON:0000178!1.98e-12!15;UBERON:0000179!1.98e-12!15;UBERON:0000463!1.98e-12!15;UBERON:0003076!8.20e-08!15;UBERON:0003057!8.20e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@ST8SIA6 | |||
}} | }} |
Latest revision as of 11:16, 17 September 2015
Short description: | p4@ST8SIA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ST8SIA6_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_uc010qce.1_5end |
EntrezGene: | ST8SIA6 |
HGNC: | 23317 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.60e-19 | 5 |
basophil mast progenitor cell | 3.60e-19 | 5 |
myeloid cell | 7.27e-15 | 108 |
common myeloid progenitor | 7.27e-15 | 108 |
hematopoietic stem cell | 1.29e-13 | 168 |
hematopoietic oligopotent progenitor cell | 2.43e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.43e-13 | 161 |
natural killer cell | 9.32e-13 | 3 |
pro-NK cell | 9.32e-13 | 3 |
hematopoietic cell | 1.44e-12 | 177 |
endocrine cell | 1.58e-10 | 9 |
melanocyte | 2.81e-09 | 10 |
melanoblast | 2.81e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.01e-33 | 31 |
leukemia | 1.91e-25 | 39 |
hematologic cancer | 1.85e-18 | 51 |
immune system cancer | 1.85e-18 | 51 |
chronic leukemia | 5.84e-17 | 8 |
organ system cancer | 1.86e-07 | 137 |