FFCP PHASE1:Hg19::chr15:39885701..39885737,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:39885701..39885737,+ to FFCP PHASE1:Hg19::chr15:39885701..39885737,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7057 | |EntrezGene=7057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=11785 | |HGNC=11785 | ||
|TSSclassifier=strong | |||
|UniProt=P07996 | |UniProt=P07996 | ||
|association_with_transcript=19bp_to_M99425_5end | |||
|cluster_id=chr15:39885701..39885737,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_27_at_THBS1_5end | |||
|id=chr15:39885701..39885737,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.32e-13!180;CL:0002371!7.38e-13!591;CL:0000057!1.88e-12!75;CL:0000144!7.29e-10!625;CL:0002139!2.70e-09!24;CL:0000548!3.12e-09!679;CL:0000004!3.12e-09!679;CL:0000255!3.12e-09!679;CL:0000222!3.46e-09!119;CL:0000012!7.61e-09!682;CL:0000220!1.39e-07!246;CL:0002321!2.68e-07!248;CL:0000680!4.59e-07!57;CL:0000056!4.59e-07!57;CL:0000355!4.59e-07!57;CL:0000071!7.72e-07!18;CL:0002546!7.72e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.42e-11;24!CL:0000115;2.46e-07;36!CL:0002138;6.49e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.75e-14,76;CL:0002139,3.14e-11,24;CL:0000115,1.56e-08,36;CL:0000222,5.46e-08,121;CL:0005020,5.18e-07,6;CL:0002138,5.18e-07,6;CL:0005022,5.18e-07,6;CL:0002078,7.41e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;6.49e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.33e-08;5!DOID:450;1.33e-08;5!DOID:66;1.33e-08;5!DOID:423;1.33e-08;5!DOID:0080000;1.33e-08;5!DOID:11722;1.33e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.21e-08,5;DOID:450,2.21e-08,5;DOID:66,2.21e-08,5;DOID:423,2.21e-08,5;DOID:0080000,2.21e-08,5;DOID:11722,2.21e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!9.99e-15!84;UBERON:0000055!9.91e-14!69;UBERON:0001981!7.70e-13!60;UBERON:0007500!7.70e-13!60;UBERON:0004537!7.70e-13!60;UBERON:0006965!7.70e-13!60;UBERON:0002049!2.71e-12!79;UBERON:0007798!2.71e-12!79;UBERON:0001637!5.47e-11!42;UBERON:0003509!5.47e-11!42;UBERON:0004572!5.47e-11!42;UBERON:0001009!3.68e-10!113;UBERON:0004535!1.50e-09!110;UBERON:0000467!1.53e-09!625;UBERON:0000468!1.58e-09!659;UBERON:0003914!1.59e-09!118;UBERON:0000480!2.06e-09!626;UBERON:0000914!2.08e-08!83;UBERON:0002329!2.08e-08!83;UBERON:0003077!2.08e-08!83;UBERON:0003059!2.08e-08!83;UBERON:0007282!2.08e-08!83;UBERON:0009618!2.08e-08!83;UBERON:0007285!2.08e-08!83;UBERON:0000490!3.29e-08!138;UBERON:0004573!3.77e-08!33;UBERON:0004571!3.77e-08!33;UBERON:0000486!1.10e-07!82;UBERON:0003102!7.37e-07!95;UBERON:0001986!7.72e-07!18;UBERON:0004638!7.72e-07!18;UBERON:0004852!7.72e-07!18;UBERON:0005256!9.58e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.33e-10;6!UBERON:0002358;1.33e-10;6!UBERON:0003684;1.33e-10;6!UBERON:0001178;1.33e-10;6!UBERON:0004573;1.53e-10;33!UBERON:0004571;1.53e-10;33!UBERON:0001637;3.03e-10;42!UBERON:0003509;3.03e-10;42!UBERON:0004572;3.03e-10;42!UBERON:0000947;1.38e-08;21!UBERON:0010191;1.38e-08;21!UBERON:0000055;3.35e-08;65!UBERON:0007500;7.48e-08;56!UBERON:0001981;7.48e-08;56!UBERON:0004537;7.48e-08;56!UBERON:0000305;2.40e-07;7!UBERON:0002097;4.96e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.18e-15,68;UBERON:0007500,1.12e-12,59;UBERON:0001981,1.12e-12,59;UBERON:0004537,1.12e-12,59;UBERON:0006965,1.12e-12,59;UBERON:0002049,1.87e-12,78;UBERON:0007798,1.87e-12,78;UBERON:0001637,6.18e-12,42;UBERON:0003509,6.18e-12,42;UBERON:0004572,6.18e-12,42;UBERON:0004872,9.04e-12,83;UBERON:0004573,5.23e-11,33;UBERON:0004571,5.23e-11,33;UBERON:0003688,1.64e-10,6;UBERON:0002358,1.64e-10,6;UBERON:0003684,1.64e-10,6;UBERON:0001178,1.64e-10,6;UBERON:0004535,7.06e-10,109;UBERON:0001009,2.35e-09,112;UBERON:0004923,5.57e-09,66;UBERON:0000947,9.52e-09,21;UBERON:0010191,9.52e-09,21;UBERON:0004871,1.18e-08,8;UBERON:0002097,5.21e-08,41;UBERON:0003914,6.62e-08,117;UBERON:0000305,1.62e-07,7;UBERON:0003081,3.88e-07,203 | |||
|phase1_expression=3.81524596468169,4.06790995392868,2.53717927372748,5.00366491765652,3.12872766099101,7.85104671690332,0,0,0,0,0,1.96597234917155,1.31883489114227,0.123766352960047,0.662794751455832,4.70627602516243,3.61616716814386,2.19093027116212,2.92759679274304,0,0,0.313454721478088,0,0.410623275218653,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0.6024118375565,0,0,0,0,0.553995408531877,1.40381113229099,0.217010870715852,0,0,0,0.145398238779565,0,0,1.39457422143411,0.411167888021826,0,1.1507695692886,0.256160706529101,0.236482229888585,1.37898272294647,0,0,1.50593871634084,0,0,2.14258724659632,0.320929027076094,0,1.9791078011203,0,0,3.48251086354301,0,0.622822248995575,2.00998932205395,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.53435074212236,0.361439152384566,0,0.579386075843295,0,3.40644409211845,0.0945348171640679,0,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,1.39133685156694,0,2.08284300964557,1.69592382577203,0.838998872419812,0.825354125820202,1.04497483268405,1.55050055501597,0,1.33888245105868,0.402829317109147,3.04108842287405,1.46437234528902,0.735326160691737,3.24056779152704,2.58969212023831,1.57170560838319,0.450445921933289,0,0,1.46561395144326,0,0,0,7.45457927542978,1.77282716330412,1.98613771219828,3.15520282823695,0,1.12135520028461,3.20246987189115,1.48000529050296,0.311211035399766,0.134710672069688,0.653847612453835,0.151357427644931,0,0,0,0,0,0,0,0,1.02077085627447,0.245668634623536,0.516628905878827,3.56400857184616,4.94533858557114,0,0,0.168336113954066,0,0.277064115484183,2.19488810440419,3.98434134538726,3.60571341375832,0.907457465280168,3.7671823494661,3.41691822109708,3.60284231971255,2.10063767259082,1.03052529238439,1.8034837803194,2.41951913231067,1.5189869901714,0.876933046450788,1.51460264546469,2.39329736469978,0.323292113637624,2.4850671476163,0.705264687593482,0.67824236924195,1.15956511897978,1.09098448236334,0.573609190778008,0,0,0,0,0,0.36497735907583,4.69348596989448,1.28648187638577,2.76269842704961,3.25057549622385,0.721879481669586,0.118306800039844,0.337169380156203,0,0.330881918197182,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.878002283269004,1.1240175325762,1.20634766893957,0.555530670951178,0,0,0,0,0.117408694235822,2.7429625074604,5.55582615091933,6.27838702374174,0,0,0,0,0,0.93733833986777,2.51973192298289,0.850650583454319,0.53735113621709,0.581267877027924,1.91691339582606,1.47798971368783,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.646358578788889,0,0,0.531876233169741,1.04007436911366,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,1.4377491329495,0,0,0.723906533337896,0.410952645100767,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,6.03115498439341,9.45673640624957,4.1002627908823,4.09994952474496,0.601892199455438,0,0,1.32845119707087,1.84369168541703,1.04260337361699,0,0.343143423810856,0,0,0.213455115606889,0.606255142892519,0,0.30239029332968,3.47350930946288,13.1977297027734,6.73584226639377,2.05022638809122,2.55853624533352,7.07757253031873,0,0.308419387605311,0.887808626565635,0,0.519254429183621,0,0,1.00253235151642,0,0.34444334449382,0,0.786746489756545,0,0,0,0,0.105551628892876,0,0.850468526382578,2.37507507712353,4.62681758070868,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.170453254832202,0.0890320356467374,0.661139661443912,0.576570202095319,2.67986696238627,0.6069466851333,0.464845549297286,2.20368642781448,0.6970372701606,0,0,0,1.48259375283136,0.429374660225974,0,0,0.190630193923825,0,0.42793898803392,0,0,0.359744915166629,0,0.117812402345686,0.606547444719948,0,2.52755073743389,0,0.243713489631284,2.11300293513511,0.272999822815972,0.707027159768564,0,1.10273068709225,1.32687795048244,1.75380354101505,1.15755106853338,0,1.21746226177622,1.8589409885985,0.563391205064483,0.143411352204052,0.196498082026242,1.426684205925,0,0.422215270595328,0,0.379473173765715,0,0.0962221127255121,1.34060455107157,0,0,0.86101074534246,3.36942951335251,1.7737206141467,2.52695740227655,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,2.62618933211459,1.78178808499583,3.99308912729002,0,0,0,0,0.211125408127993,0,0,0,0.306806047506464,0,3.73247505194169,1.43789361835723,0,0,0.591860433821602,0,1.11136990144637,0,0,0,0.520855522170466,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.230850775511391,0.341826167541004,0,0,0,0.31900115973192,1.28236630762607,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0.277349346026277,0,0.195984794828755,0.261177619741208,0.17472666824203,0,0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| ||
|short_description=p27@THBS1 | |||
}} | }} |
Latest revision as of 11:23, 17 September 2015
Short description: | p27@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | 19bp_to_M99425_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | P07996 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.75e-14 | 76 |
endothelial cell of vascular tree | 3.14e-11 | 24 |
endothelial cell | 1.56e-08 | 36 |
mesodermal cell | 5.46e-08 | 121 |
lymphangioblast | 5.18e-07 | 6 |
endothelial cell of lymphatic vessel | 5.18e-07 | 6 |
vascular lymphangioblast | 5.18e-07 | 6 |
meso-epithelial cell | 7.41e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.18e-15 | 68 |
epithelial tube open at both ends | 1.12e-12 | 59 |
blood vessel | 1.12e-12 | 59 |
blood vasculature | 1.12e-12 | 59 |
vascular cord | 1.12e-12 | 59 |
vasculature | 1.87e-12 | 78 |
vascular system | 1.87e-12 | 78 |
artery | 6.18e-12 | 42 |
arterial blood vessel | 6.18e-12 | 42 |
arterial system | 6.18e-12 | 42 |
splanchnic layer of lateral plate mesoderm | 9.04e-12 | 83 |
systemic artery | 5.23e-11 | 33 |
systemic arterial system | 5.23e-11 | 33 |
omentum | 1.64e-10 | 6 |
peritoneum | 1.64e-10 | 6 |
abdominal cavity | 1.64e-10 | 6 |
visceral peritoneum | 1.64e-10 | 6 |
cardiovascular system | 7.06e-10 | 109 |
circulatory system | 2.35e-09 | 112 |
organ component layer | 5.57e-09 | 66 |
aorta | 9.52e-09 | 21 |
aortic system | 9.52e-09 | 21 |
somatic layer of lateral plate mesoderm | 1.18e-08 | 8 |
skin of body | 5.21e-08 | 41 |
epithelial tube | 6.62e-08 | 117 |
amnion | 1.62e-07 | 7 |
lateral plate mesoderm | 3.88e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.21e-08 | 5 |
myotonic disease | 2.21e-08 | 5 |
muscle tissue disease | 2.21e-08 | 5 |
myopathy | 2.21e-08 | 5 |
muscular disease | 2.21e-08 | 5 |
myotonic dystrophy | 2.21e-08 | 5 |