FFCP PHASE1:Hg19::chr10:17659325..17659355,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:17659325..17659355,- to FFCP PHASE1:Hg19::chr10:17659325..17659355,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9200 | |EntrezGene=9200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9639 | |HGNC=9639 | ||
|TSSclassifier=strong | |||
|UniProt=A6NP58 | |UniProt=A6NP58 | ||
|association_with_transcript=11bp_to_ENST00000326961_5end | |||
|cluster_id=chr10:17659325..17659355,- | |||
|coexpression_cluster_id=C3003 | |||
|description=CAGE_peak_1_at_PTPLA_5end | |||
|id=chr10:17659325..17659355,- | |||
|ontology_enrichment_celltype=CL:0000055!1.95e-19!180;CL:0002321!3.76e-14!248;CL:0000220!4.11e-14!246;CL:0000066!2.08e-10!254;CL:0000057!1.04e-09!75;CL:0000012!1.16e-08!682;CL:0000077!2.02e-08!19;CL:0000222!5.11e-08!119;CL:0000548!6.18e-08!679;CL:0000004!6.18e-08!679;CL:0000255!6.18e-08!679 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.68e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.36e-14,250;CL:0000066,2.26e-10,253;CL:0000057,5.81e-10,76;CL:0000077,1.94e-08,19;CL:0000222,4.59e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!5.42e-10!238;UBERON:0009142!5.42e-10!238;UBERON:0002100!7.26e-10!216;UBERON:0005256!1.09e-09!143;UBERON:0000475!1.58e-08!365;UBERON:0000481!2.31e-08!347;UBERON:0000914!6.74e-08!83;UBERON:0002329!6.74e-08!83;UBERON:0003077!6.74e-08!83;UBERON:0003059!6.74e-08!83;UBERON:0007282!6.74e-08!83;UBERON:0009618!6.74e-08!83;UBERON:0007285!6.74e-08!83;UBERON:0004290!3.81e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.82e-09,199;UBERON:0003104,3.28e-09,160;UBERON:0009142,3.28e-09,160;UBERON:0007503,1.06e-08,78;UBERON:0005256,1.72e-08,122;UBERON:0002329,3.45e-07,71;UBERON:0003059,3.45e-07,71;UBERON:0007282,3.45e-07,71;UBERON:0004290,3.45e-07,71;UBERON:0009618,3.45e-07,71;UBERON:0000490,3.60e-07,148;UBERON:0007524,4.33e-07,73;UBERON:0003102,4.36e-07,99;UBERON:0003077,7.73e-07,72;UBERON:0007285,7.73e-07,72 | |||
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| ||
|short_description=p1@PTPLA | |||
}} | }} |
Latest revision as of 11:27, 17 September 2015
Short description: | p1@PTPLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTPLA_5end |
Coexpression cluster: | C3003_mesothelioma_heart_basal_Fibroblast_Melanocyte_Mesenchymal_Retinal |
Association with transcript: | 11bp_to_ENST00000326961_5end |
EntrezGene: | PTPLA |
HGNC: | 9639 |
UniProt: | A6NP58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.36e-14 | 250 |
epithelial cell | 2.26e-10 | 253 |
fibroblast | 5.81e-10 | 76 |
mesothelial cell | 1.94e-08 | 19 |
mesodermal cell | 4.59e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.82e-09 | 199 |
mesenchyme | 3.28e-09 | 160 |
entire embryonic mesenchyme | 3.28e-09 | 160 |
epithelial vesicle | 1.06e-08 | 78 |
trunk mesenchyme | 1.72e-08 | 122 |
somite | 3.45e-07 | 71 |
presomitic mesoderm | 3.45e-07 | 71 |
presumptive segmental plate | 3.45e-07 | 71 |
dermomyotome | 3.45e-07 | 71 |
trunk paraxial mesoderm | 3.45e-07 | 71 |
unilaminar epithelium | 3.60e-07 | 148 |
dense mesenchyme tissue | 4.33e-07 | 73 |
surface structure | 4.36e-07 | 99 |
paraxial mesoderm | 7.73e-07 | 72 |
presumptive paraxial mesoderm | 7.73e-07 | 72 |