FFCP PHASE1:Hg19::chr11:2920913..2920942,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5002 | |EntrezGene=5002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10964 | |HGNC=10964 | ||
|TSSclassifier=strong | |||
|UniProt=Q96BI1 | |UniProt=Q96BI1 | ||
|association_with_transcript=-8bp_to_ENST00000347936,NM_183233,uc001lwx.2_5end | |association_with_transcript=-8bp_to_ENST00000347936,NM_183233,uc001lwx.2_5end | ||
|cluster_id=chr11:2920913..2920942,+ | |||
|coexpression_cluster_id=C1631 | |||
|description=CAGE_peak_4_at_SLC22A18_5end | |description=CAGE_peak_4_at_SLC22A18_5end | ||
|id=chr11:2920913..2920942,+ | |id=chr11:2920913..2920942,+ | ||
|ontology_enrichment_celltype=CL:0000839!5.11e-26!70;CL:0000557!2.18e-25!71;CL:0002194!1.01e-24!63;CL:0000576!1.01e-24!63;CL:0000040!1.01e-24!63;CL:0000559!1.01e-24!63;CL:0000763!4.12e-24!112;CL:0000049!4.12e-24!112;CL:0000766!1.07e-23!76;CL:0002009!1.96e-23!65;CL:0002057!1.45e-14!42;CL:0000860!9.67e-14!45;CL:0000037!6.39e-11!172;CL:0000566!6.39e-11!172;CL:0002032!1.16e-10!165;CL:0000837!1.16e-10!165;CL:0000988!3.65e-10!182;CL:0002031!1.16e-08!124;CL:0002087!1.18e-08!119;CL:0000738!7.40e-08!140 | |ontology_enrichment_celltype=CL:0000839!5.11e-26!70;CL:0000557!2.18e-25!71;CL:0002194!1.01e-24!63;CL:0000576!1.01e-24!63;CL:0000040!1.01e-24!63;CL:0000559!1.01e-24!63;CL:0000763!4.12e-24!112;CL:0000049!4.12e-24!112;CL:0000766!1.07e-23!76;CL:0002009!1.96e-23!65;CL:0002057!1.45e-14!42;CL:0000860!9.67e-14!45;CL:0000037!6.39e-11!172;CL:0000566!6.39e-11!172;CL:0002032!1.16e-10!165;CL:0000837!1.16e-10!165;CL:0000988!3.65e-10!182;CL:0002031!1.16e-08!124;CL:0002087!1.18e-08!119;CL:0000738!7.40e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.47e-28;39!CL:0000234;2.47e-28;39!CL:0000860;1.69e-20;33!CL:0002057;1.69e-20;33!CL:0000235;2.25e-18;6!CL:0000763;1.83e-16;100!CL:0000766;3.55e-16;69!CL:0000148;7.24e-15;10!CL:0000576;9.68e-15;48!CL:0002567;1.72e-10;3!CL:0000147;2.89e-10;14!CL:0000710;7.93e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,9.70e-41,66;CL:0000763,3.21e-40,108;CL:0000049,3.21e-40,108;CL:0000557,5.31e-40,67;CL:0002194,6.31e-38,59;CL:0000576,6.31e-38,59;CL:0000040,6.31e-38,59;CL:0000559,6.31e-38,59;CL:0000766,1.29e-36,72;CL:0002009,2.01e-36,61;CL:0000473,8.94e-31,48;CL:0000234,8.94e-31,48;CL:0002032,2.79e-23,161;CL:0000837,2.79e-23,161;CL:0000037,7.60e-22,168;CL:0000988,3.60e-20,177;CL:0000860,3.40e-19,42;CL:0002057,3.40e-19,42;CL:0002031,1.91e-18,120;CL:0000235,2.27e-18,6;CL:0002087,1.44e-15,115;CL:0000738,2.93e-15,136;CL:0000148,6.78e-15,10;CL:0000541,6.78e-15,10;CL:0002567,1.73e-10,3;CL:0000147,2.76e-10,14;CL:0000219,3.34e-07,386;CL:0000710,7.70e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000049;2.05e-16;108!CL:0002057;2.91e-14;42 | |||
|ontology_enrichment_disease=DOID:8692!2.47e-07!31 | |ontology_enrichment_disease=DOID:8692!2.47e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;7.41e-13;31!DOID:1240;2.20e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.43e-13,31;DOID:1240,7.46e-10,39;DOID:2531,7.50e-07,51;DOID:0060083,7.50e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.79e-20!80;UBERON:0002390!2.48e-20!102;UBERON:0003061!2.48e-20!102;UBERON:0002193!6.06e-20!112;UBERON:0001474!8.16e-18!86;UBERON:0002405!1.12e-15!115;UBERON:0004765!2.59e-13!101;UBERON:0001434!2.59e-13!101;UBERON:0007023!2.20e-08!115;UBERON:0000062!9.49e-07!511 | |ontology_enrichment_uberon=UBERON:0002371!1.79e-20!80;UBERON:0002390!2.48e-20!102;UBERON:0003061!2.48e-20!102;UBERON:0002193!6.06e-20!112;UBERON:0001474!8.16e-18!86;UBERON:0002405!1.12e-15!115;UBERON:0004765!2.59e-13!101;UBERON:0001434!2.59e-13!101;UBERON:0007023!2.20e-08!115;UBERON:0000062!9.49e-07!511 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.18e-34,76;UBERON:0001474,4.50e-31,82;UBERON:0002405,2.71e-28,93;UBERON:0004765,1.59e-27,90;UBERON:0002390,3.50e-26,98;UBERON:0003061,3.50e-26,98;UBERON:0002193,1.31e-24,108;UBERON:0001434,6.90e-24,100;UBERON:0002204,7.14e-11,167;UBERON:0003081,6.83e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,1.204823675113,0.369754010166788,0,0,0,0,1.40381113229099,0.868043482863407,0.447830948479849,1.94336199611388,0.515151135268373,2.90796477559129,2.26725566213286,1.94067248950253,3.95129362739664,2.46700732813095,0.619412741790207,0.863077176966451,0.256160706529101,0,1.72372840368309,0,1.35426486594342,2.44715041405386,0.818718450173537,0,3.36692281607993,0,0.639337125799041,1.31940520074686,1.59570926097305,0.852449501065388,1.45104619314292,2.26954089876456,1.24564449799115,3.01498398308092,2.08593167368081,0,1.81619850790011,0,0,0.211255286311942,0.212604299965044,0,0.673971786878971,1.95229960693958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0.364295288292542,0,1.29818957461873,0.870648686496336,1.72845348674525,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.272746120590835,1.14721838155602,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0,0,0.435758888184812,0.474541238222193,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,4.67812311566055,1.40402559083543,4.31030370637312,0,0,0,0,0,0,0,0.528290604079356,1.24396869324463,3.747118788841,3.02981840223312,3.74637576323797,13.3695948945397,22.2713149699089,11.9750712215894,7.71206195274926,20.7236709912303,4.85904935471983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1897073538857,32.6467109430882,10.5416969741516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0.473107245101804,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.0920809889358963,0,0,0,1.35359883872224,0,0,0,0.105551628892876,0,0.510281115829547,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576570202095319,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0.670302275535787,0,0.282431402330337,0,1.68471475667626,0,0,1.01489521846434,0,0,0.952927101831156,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,1.69338866179106,2.27235358192189,7.86232098717685,0.228234679033192,0,15.038068625404,1.52362600021443,0.1605880751037,0,1.27753871307098,3.09154810280188,4.60861146462687,4.47352215784832,5.17232339306916,0.781552381608161,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0.449341755736634,0,6.65044081294933,0.295930216910801,0,0,0,0.371072392647405,0,0,1.13697999995054,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,2.82564461511045,2.16075186470203,0.225595660617181,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0,0.234264445725339,0,0.19566461893209,0,0.789168805698781,0,0,1.13735843331278,0,0,0.664653872707185,0.992975867626496,0.313932918407225,1.19472429772959,0,0,0,0,0.0870592065804026,2.09672001890436,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0.397429223405979,0,0,0,3.20179492109029,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.315222829196793,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,1.81299346432201,0,0,0,0,0,0,0.320362237703084,0.471612915298998,2.48543433208317,3.47316215268366,0,0,1.27668251554036,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0.124980407962107,0.606596470166591,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,1.51929978088691,0.138258436151731,0,0,0,0.655219697692825,0,6.33936370075881,0,2.8806767017418,0,0,0,0.559518030877778,0.622077260032973,0,0,0,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,1.10057159113007,0.462102664601353,0,0,0,0.150420656698515,0,0,0,2.45657876265145,0.295712172434091,0.0675375846183947,0,0.206686796501184,0,0,0.548257766857182,0.496211178389294,0,0.383287282918786,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0.31020638566432,0,0,2.65005630761156,0,0,0.102662806856247,0,0,0,0,0,0,0,0.452888530700021,0.463044948647668,0,0,0,1.41405928260976,0.196308467114945,0,0,0,0.281951753939561,0.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| ||
|short_description=p4@SLC22A18 | |short_description=p4@SLC22A18 | ||
}} | }} |
Latest revision as of 13:11, 17 September 2015
Short description: | p4@SLC22A18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC22A18_5end |
Coexpression cluster: | C1631_Monocytederived_Melanocyte_CD14_Macrophage_Mast_Mesenchymal_Fibroblast |
Association with transcript: | -8bp_to_ENST00000347936, NM_183233, uc001lwx.2_5end |
EntrezGene: | SLC22A18 |
HGNC: | 10964 |
UniProt: | Q96BI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 9.70e-41 | 66 |
myeloid cell | 3.21e-40 | 108 |
common myeloid progenitor | 3.21e-40 | 108 |
granulocyte monocyte progenitor cell | 5.31e-40 | 67 |
monopoietic cell | 6.31e-38 | 59 |
monocyte | 6.31e-38 | 59 |
monoblast | 6.31e-38 | 59 |
promonocyte | 6.31e-38 | 59 |
myeloid leukocyte | 1.29e-36 | 72 |
macrophage dendritic cell progenitor | 2.01e-36 | 61 |
defensive cell | 8.94e-31 | 48 |
phagocyte | 8.94e-31 | 48 |
hematopoietic oligopotent progenitor cell | 2.79e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.79e-23 | 161 |
hematopoietic stem cell | 7.60e-22 | 168 |
hematopoietic cell | 3.60e-20 | 177 |
classical monocyte | 3.40e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.40e-19 | 42 |
hematopoietic lineage restricted progenitor cell | 1.91e-18 | 120 |
macrophage | 2.27e-18 | 6 |
nongranular leukocyte | 1.44e-15 | 115 |
leukocyte | 2.93e-15 | 136 |
melanocyte | 6.78e-15 | 10 |
melanoblast | 6.78e-15 | 10 |
light melanocyte | 1.73e-10 | 3 |
pigment cell | 2.76e-10 | 14 |
motile cell | 3.34e-07 | 386 |
neurecto-epithelial cell | 7.70e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.18e-34 | 76 |
bone element | 4.50e-31 | 82 |
immune system | 2.71e-28 | 93 |
skeletal element | 1.59e-27 | 90 |
hematopoietic system | 3.50e-26 | 98 |
blood island | 3.50e-26 | 98 |
hemolymphoid system | 1.31e-24 | 108 |
skeletal system | 6.90e-24 | 100 |
musculoskeletal system | 7.14e-11 | 167 |
lateral plate mesoderm | 6.83e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.43e-13 | 31 |
leukemia | 7.46e-10 | 39 |
hematologic cancer | 7.50e-07 | 51 |
immune system cancer | 7.50e-07 | 51 |