FFCP PHASE1:Hg19::chr2:51255231..51255244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-312bp_to_ENST00000496792_5end | |association_with_transcript=-312bp_to_ENST00000496792_5end | ||
|cluster_id=chr2:51255231..51255244,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_38_at_NRXN1_5end | |description=CAGE_peak_38_at_NRXN1_5end | ||
|id=chr2:51255231..51255244,- | |id=chr2:51255231..51255244,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.32e-26;2!CL:0000242;4.32e-26;2!CL:0000312;2.66e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000362;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.32e-26,2;CL:0000312,2.66e-11,5;CL:0000240,1.22e-09,6;CL:0000311,1.22e-09,6;CL:0000079,1.22e-09,6;CL:0000237,1.22e-09,6;CL:0000036,1.22e-09,6;CL:0000357,1.22e-09,6;CL:0000114,1.22e-09,6;CL:0000362,7.48e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.42e-11;5!CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.00e-13;4!DOID:1325;2.03e-08;7!DOID:3904;2.03e-08;7!DOID:3905;7.91e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.00e-13,4;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.10e-17!8;UBERON:0003135!1.67e-12!11;UBERON:0000998!5.79e-10!1;UBERON:0006868!5.79e-10!1;UBERON:0001950!1.11e-09!20;UBERON:0001282!1.91e-09!1;UBERON:0009842!1.91e-09!1;UBERON:0003704!1.91e-09!1;UBERON:0001171!1.91e-09!1;UBERON:0001172!1.91e-09!1;UBERON:0002022!2.67e-09!1;UBERON:0002619!7.95e-09!22;UBERON:0000956!8.69e-08!25;UBERON:0000203!8.69e-08!25;UBERON:0001872!1.83e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;3.42e-11;5!UBERON:0000473;1.75e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,3.26e-11,5;UBERON:0004117,3.26e-11,5;UBERON:0007689,3.26e-11,5;UBERON:0007123,3.26e-11,5;UBERON:0003091,3.26e-11,5;UBERON:0000473,1.80e-07,8 | |||
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|short_description=p38@NRXN1 | |short_description=p38@NRXN1 | ||
}} | }} |
Latest revision as of 13:53, 17 September 2015
Short description: | p38@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_NRXN1_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | -312bp_to_ENST00000496792_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.32e-26 | 2 |
keratinocyte | 2.66e-11 | 5 |
stratified squamous epithelial cell | 1.22e-09 | 6 |
keratin accumulating cell | 1.22e-09 | 6 |
stratified epithelial cell | 1.22e-09 | 6 |
keratinizing barrier epithelial cell | 1.22e-09 | 6 |
epithelial fate stem cell | 1.22e-09 | 6 |
stratified epithelial stem cell | 1.22e-09 | 6 |
surface ectodermal cell | 1.22e-09 | 6 |
epidermal cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.26e-11 | 5 |
pharyngeal pouch | 3.26e-11 | 5 |
thyroid diverticulum | 3.26e-11 | 5 |
pharyngeal pouch 2 | 3.26e-11 | 5 |
thyroid primordium | 3.26e-11 | 5 |
testis | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.00e-13 | 4 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |