FFCP PHASE1:Hg19::chr15:41136586..41136725,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6692 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11246 | |||
|TSSclassifier=strong | |||
|UniProt=O43278 | |||
|association_with_transcript=0bp_to_ENST00000431806,NM_001032367,uc001znc.2,uc010ucs.1_5end | |||
|cluster_id=chr15:41136586..41136725,+ | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_1_at_SPINT1_5end | |||
|id=chr15:41136586..41136725,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.35e-14!254;CL:0002076!1.04e-12!43;CL:0000223!2.73e-07!59;CL:0002368!4.41e-07!13;CL:0000738!5.84e-07!140;CL:0000766!7.84e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.31e-12;42!CL:0002368;5.13e-08;13!CL:0002251;7.94e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.40e-16,253;CL:0002076,6.17e-15,42;CL:0000223,9.35e-10,58;CL:0000766,9.42e-09,72;CL:0000763,4.43e-08,108;CL:0000049,4.43e-08,108;CL:0002368,5.23e-08,13;CL:0000557,6.51e-08,67;CL:0002251,7.58e-08,20;CL:0002009,1.64e-07,61;CL:0000738,2.23e-07,136;CL:0002194,7.67e-07,59;CL:0000576,7.67e-07,59;CL:0000040,7.67e-07,59;CL:0000559,7.67e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.05e-07!14;DOID:305!8.22e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.83e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.70e-08,14;DOID:305,4.73e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.74e-08!169;UBERON:0000925!2.74e-08!169;UBERON:0006595!2.74e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.03e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.32e-11,160;UBERON:0000925,8.32e-11,160;UBERON:0006595,8.32e-11,160;UBERON:0001008,2.77e-09,48;UBERON:0006554,5.62e-09,47;UBERON:0004921,1.21e-07,118;UBERON:0001007,1.52e-07,145;UBERON:0001555,1.52e-07,145;UBERON:0007026,1.52e-07,145;UBERON:0002390,3.97e-07,98;UBERON:0003061,3.97e-07,98 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,69.542704029927,320.290736099344,55.9209912653241,68.8431813176264,0,0,0.672325146451775,0,0,0,0.123121058076788,0.612002073732759,0,0,0.273748850145768,0.125542639594803,15.4355079610862,13.1360943119913,12.6724357915024,12.194292582316,2.30297638858328,15.1719800849754,62.520643264567,67.1689198875498,112.035465080537,0,0,3.81680571135301,6.64794490238253,11.6315779532682,6.94434786290726,1.34349284543955,3.2389366601898,2.06060454107349,2.32637182047304,4.91238726795452,2.42584061187816,2.09186133215116,3.70051099219643,3.09706370895104,1.1507695692886,2.56160706529101,3.07426898855161,4.13694816883942,12.2642089880927,4.06279459783025,2.25890807451126,3.547779950752,2.24723484445085,2.75475503133812,2.88836124368484,1.27867425159808,2.63881040149373,4.78712778291916,2.55734850319616,0.580418477257168,1.13477044938228,1.86846674698672,2.76373531782418,3.12889751052121,3.04064382587163,3.63239701580021,2.20966581592539,0.949387162322653,7.39393502091796,10.4176106982871,6.0801007197429,21.3424399178341,25.3798948902146,15.1082051495255,8.55038231223746,11.5371672775472,5.47992461293902,3.51992488922645,7.64594055766984,6.22656477704488,10.6682555641627,6.80673177961221,4.02326707968138,5.2883589822789,2.86216126360609,4.55370375287559,2.93618594685469,4.58727873750275,5.28685314316103,2.24203425192614,2.10707267820062,1.57367816091066,1.57204305099666,0.616804496998528,7.69057878797119,1.62961133316795,1.4203434172042,0,4.90206010294764,0.589211814949674,1.99380505125259,0.541607727530031,5.12365278902701,3.64166173167659,5.91976456573234,6.07970039128866,5.506258628966,0.889719378972363,1.60524496853828,1.04535523804977,4.53237370790265,0.383220493601921,1.03088233644789,0,2.22995790026868,1.30216690771284,0,1.6563263098555,1.02389288923535,1.24930726552346,1.65744076430812,0.821127996921047,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0.383587685530591,0,0,0.144846518960824,0,0,3.02511414925017,6.20842312895179,5.09441757020131,16.7653216637072,134.060666091656,73.7861041141014,48.0330142608931,42.8359153756197,44.5409167738198,1.43094374583205,1.71598473234038,1.48583000531826,0,0,0,0.56530794192401,0,0,0.208994966536811,0.516833518338658,0,0,0.805658634218294,0,1.95249646038536,0,0.81014194788176,0.357198913136319,0.22452937262617,0.337834441449967,0,0,0.183201743930407,3.9534125230819,7.75560528296651,120.361958391339,0,0,0,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,1.05950199351452,0.576175924479999,0.234321431833797,0,0.570471821544449,0,0,0,0,0,0.245668634623536,0,0,0.247266929278557,0,0.718618141816238,0,0.250237039743928,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,57.3984733894992,42.5483948121702,43.0206893083506,29.6396105894917,21.9999415413666,31.604752460509,28.2994680191961,35.0725982717124,15.3290490811849,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,2.4694440679884,2.94017422771084,0,0,0,0,76.7447856509029,16.8136454092555,49.6071290046988,69.6890870197241,29.8571048062544,52.7754137403619,0.325808305310325,1.03993478527958,10.1031939417691,1.15930404975077,1.6437217193015,0.144366447761074,0,0.570762456703795,44.2514462857194,38.6318772942693,9.84868024349589,21.7623966579491,23.1864613170416,40.3055486143141,32.0845864859822,37.7121758664748,28.1213761286944,51.1515731784573,79.3602145871987,0,3.25779205848936,10.7810620081201,8.93543711185161,14.5178798440337,0.317489471460845,4.96584953225761,2.34434894420094,8.55362230113526,0.719792448923265,11.1126931402249,1.71495859578347,0.336393253036082,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.299918973546171,14.5948536769429,7.5338563714819,16.8667151586425,0,0,0,0,0,0,0,1.97030760201927,0.431255149719035,0.385029108839245,0,0,0,0.335032530668698,0,29.2112739339401,20.9413021442817,17.4054515643135,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.553107505625109,0,0.783204629850962,0,9.9248652538986,7.33428282783297,7.4709290462411,38.8003291451212,59.9167582237789,39.3107381328584,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0.116210378459959,45.3222935968583,73.3853681310023,90.3314501461143,0,0,0.131124414959424,63.6191454199451,50.2910151291828,41.5705377663733,32.1506294237174,28.1822849143978,0,0,1.94324324491925,7.71136263451447,14.6311076273681,29.5996966574364,55.8179037968634,67.3171567232267,26.6410958119392,0.219259876645935,0.522870902049801,2.3080511260475,4.59220503979588,1.30151357865721,34.9309029485779,0.27470839445503,0.247528499761764,36.1787288937589,52.0048196829217,0,0,0,0,0,0.107420244868274,0,0.340906509664404,0,69.2543795362498,51.5069380538485,29.7337620112381,99.2357830192945,0,0,0,0,0,0,0,0,0.372158369359667,1.2655176988749,0,0.255897791311334,0,0,0,0,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0.1964980820262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| |||
|short_description=p1@SPINT1 | |||
}} |
Latest revision as of 14:02, 17 September 2015
Short description: | p1@SPINT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPINT1_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 0bp_to_ENST00000431806, NM_001032367, uc001znc.2, uc010ucs.1_5end |
EntrezGene: | SPINT1 |
HGNC: | 11246 |
UniProt: | O43278 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.40e-16 | 253 |
endo-epithelial cell | 6.17e-15 | 42 |
endodermal cell | 9.35e-10 | 58 |
myeloid leukocyte | 9.42e-09 | 72 |
myeloid cell | 4.43e-08 | 108 |
common myeloid progenitor | 4.43e-08 | 108 |
respiratory epithelial cell | 5.23e-08 | 13 |
granulocyte monocyte progenitor cell | 6.51e-08 | 67 |
epithelial cell of alimentary canal | 7.58e-08 | 20 |
macrophage dendritic cell progenitor | 1.64e-07 | 61 |
leukocyte | 2.23e-07 | 136 |
monopoietic cell | 7.67e-07 | 59 |
monocyte | 7.67e-07 | 59 |
monoblast | 7.67e-07 | 59 |
promonocyte | 7.67e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.32e-11 | 160 |
endoderm | 8.32e-11 | 160 |
presumptive endoderm | 8.32e-11 | 160 |
renal system | 2.77e-09 | 48 |
urinary system structure | 5.62e-09 | 47 |
subdivision of digestive tract | 1.21e-07 | 118 |
digestive system | 1.52e-07 | 145 |
digestive tract | 1.52e-07 | 145 |
primitive gut | 1.52e-07 | 145 |
hematopoietic system | 3.97e-07 | 98 |
blood island | 3.97e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.70e-08 | 14 |
carcinoma | 4.73e-08 | 106 |