FFCP PHASE1:Hg19::chr12:15114725..15114730,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=397 | |EntrezGene=397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=679 | |HGNC=679 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2R5 | |UniProt=F5H2R5 | ||
|association_with_transcript=-63bp_to_ENST00000542276_5end | |association_with_transcript=-63bp_to_ENST00000542276_5end | ||
|cluster_id=chr12:15114725..15114730,- | |||
|description=CAGE_peak_14_at_ARHGDIB_5end | |description=CAGE_peak_14_at_ARHGDIB_5end | ||
|id=chr12:15114725..15114730,- | |id=chr12:15114725..15114730,- | ||
|ontology_enrichment_celltype=CL:0000988!5.44e-15!182;CL:0000037!5.98e-15!172;CL:0000566!5.98e-15!172;CL:0002032!1.23e-13!165;CL:0000837!1.23e-13!165;CL:0000071!9.57e-11!18;CL:0002546!9.57e-11!18;CL:0002139!5.46e-10!24;CL:0000738!4.36e-09!140;CL:0002031!1.24e-08!124;CL:0000115!1.49e-08!35;CL:1000413!5.80e-08!9;CL:0000763!7.98e-08!112;CL:0000049!7.98e-08!112;CL:0002087!2.29e-07!119;CL:0000451!5.47e-07!10 | |ontology_enrichment_celltype=CL:0000988!5.44e-15!182;CL:0000037!5.98e-15!172;CL:0000566!5.98e-15!172;CL:0002032!1.23e-13!165;CL:0000837!1.23e-13!165;CL:0000071!9.57e-11!18;CL:0002546!9.57e-11!18;CL:0002139!5.46e-10!24;CL:0000738!4.36e-09!140;CL:0002031!1.24e-08!124;CL:0000115!1.49e-08!35;CL:1000413!5.80e-08!9;CL:0000763!7.98e-08!112;CL:0000049!7.98e-08!112;CL:0002087!2.29e-07!119;CL:0000451!5.47e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:1000413;3.17e-17;9!CL:0000071;4.97e-11;18!CL:0000575;2.72e-09;2!CL:0002139;5.06e-08;24!CL:0000115;1.69e-07;36!CL:0002544;2.12e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,3.81e-17,9;CL:0000071,4.82e-11,18;CL:0002546,4.82e-11,18;CL:0000575,2.41e-09,2;CL:0000076,1.29e-08,63;CL:0000115,3.77e-08,36;CL:0002139,4.95e-08,24;CL:0002544,2.18e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;4.97e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!4.84e-14!51;DOID:0060083!4.84e-14!51;DOID:1240!6.94e-10!39;DOID:8692!1.00e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.36e-12!216;UBERON:0001986!9.57e-11!18;UBERON:0004638!9.57e-11!18;UBERON:0004852!9.57e-11!18;UBERON:0004872!7.60e-10!84;UBERON:0004535!2.10e-08!110;UBERON:0001009!2.92e-08!113;UBERON:0003915!5.80e-08!9;UBERON:0004700!5.80e-08!9;UBERON:0001917!5.80e-08!9;UBERON:0000487!7.83e-08!22;UBERON:0002193!7.72e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;3.17e-17;9!UBERON:0004700;3.17e-17;9!UBERON:0001917;3.17e-17;9!UBERON:0004638;4.97e-11;18!UBERON:0001986;4.97e-11;18!UBERON:0004852;4.97e-11;18!UBERON:0000487;7.66e-09;22!UBERON:0001637;6.29e-08;42!UBERON:0003509;6.29e-08;42!UBERON:0004572;6.29e-08;42!UBERON:0006914;1.16e-07;25!UBERON:0000490;2.73e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,3.81e-17,9;UBERON:0004700,3.81e-17,9;UBERON:0001917,3.81e-17,9;UBERON:0004638,4.82e-11,18;UBERON:0001986,4.82e-11,18;UBERON:0004852,4.82e-11,18;UBERON:0000487,7.48e-09,22;UBERON:0001637,2.08e-08,42;UBERON:0003509,2.08e-08,42;UBERON:0004572,2.08e-08,42;UBERON:0004872,3.24e-08,83;UBERON:0006914,1.14e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.18441372130172,0.791300934685361,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.840547463227464,1.55991119954897,1.41679406364623,0,0.383829398097213,0,0,0.30120591877825,0,0.154934401160603,0.568676929949686,0.587200878669695,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0.344745680736619,1.29096936716765,1.35426486594342,0,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0,0.426224750532694,0.290209238628584,0.56738522469114,0,0,0,0.434377689410233,0,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,1.68152568894461,0,0,0,0.616804496998528,0.167186495390678,0.32592226663359,0,0,0.668462741311041,0.883817722424512,0.443067789167242,0,0,0.130059347559878,0.328875809207352,0,0.869409257205157,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0,0,0,0,0,0,0,0,0.0654895377488563,1.09288586487763,1.85392221392215,0.97364218096405,0.348259474598534,0.664789802594326,0.238490624305342,0.571994910780128,0.371457501329565,0.79504962946682,0.860234595106124,2.08284300964557,2.26123176769604,2.09749718104953,1.6507082516404,1.04497483268405,0.516833518338658,0.35576626268671,0.33472061276467,0,0.760272105718513,0,0,2.43042584364528,0.803697554556718,0.673588117878509,0.337834441449967,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0,0.379891534993739,0,0,0.354668382198357,0,2.1349799145941,0,0.622422070799533,1.21239604862719,0.980771418680752,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7223723958405,0,0,0,0.300091096084402,0.412210116953756,0,0,0,0.0974370051611986,0,0,0,0,0.302256294682921,0,1.15956511897978,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.201057944823262,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0.246217006087397,1.40402559083543,0.148631162288728,0.93733833986777,0.503946384596579,0.708875486211932,0.358234090811393,0.290633938513962,0,0.492663237895943,0.352193736052904,0,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,1.21251028578504,0,0,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0.116210378459959,0,0.40101294060657,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,1.13733384070897,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,1.3940745403212,0.308033580176089,1.59691809095107,0,0.18532421910392,0.429374660225974,0,0,0.190630193923825,0,0,0,0,0,0,0,1.01091240786658,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.845086807596724,0,0,0,0,0,0,0.379473173765715,0,0.288666338176536,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,1.22520107990516,0.371606350251437,0,0.0711418433484141,0.478278818186467,0.399158742865633,0.383010740264733,0,1.62310970137278,0,0,1.09675927041116,0,0.846458889008016,0.1605880751037,0.605399121573143,0.851692475380653,0.343505344755765,0.307240764308458,0.447352215784832,0.500547425135725,0.390776190804081,0.556812347790485,2.46174797895425,0,0.66614393599564,0,0.18714054040822,0.439524537815682,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.19924798825107,0,0,0,1.72318727645497,0,0.359473404589307,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.957003479195758,0.274792780205587,0,2.04386596391473,0.156980256395025,0,0.451191321234361,0,0.167821586975843,0,0.794682894901893,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0.626531697032732,0,0,0,0.547364367646998,0.586993856796269,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0.195984794828755,1.21882889212564,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,1.52411997718412,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0.383830394638891,0,0.662091970365432,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,1.40963004463334,0.106787412567695,0,0.414239055347196,0,0,0.852548188666271,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,1.27437413730962,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0,1.94358060540469,0.192914038270915,0,0,0,0,0.138258436151731,1.36402216187572,0.531459361253452,0.490696182767533,0,0,0.633936370075881,2.19986135440423,0.106691729694141,4.13315951185958,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0.527613733078862,0.255524855279191,0,0,0,0,0.443511850813194,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55731135809876,0,0,0.207216164163037,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.845855261818682,0.386747327841463,1.39917618294901,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0.31037357147929,0,0.25458863311266,0,0,0,0.471464371102113,0.0717222053926763,0,0.162806537221949,0,0,0,0,0.244482888365733,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.18441372130172,0.791300934685361,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.840547463227464,1.55991119954897,1.41679406364623,0,0.383829398097213,0,0,0.30120591877825,0,0.154934401160603,0.568676929949686,0.587200878669695,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0.344745680736619,1.29096936716765,1.35426486594342,0,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0,0.426224750532694,0.290209238628584,0.56738522469114,0,0,0,0.434377689410233,0,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,1.68152568894461,0,0,0,0.616804496998528,0.167186495390678,0.32592226663359,0,0,0.668462741311041,0.883817722424512,0.443067789167242,0,0,0.130059347559878,0.328875809207352,0,0.869409257205157,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0,0,0,0,0,0,0,0,0.0654895377488563,1.09288586487763,1.85392221392215,0.97364218096405,0.348259474598534,0.664789802594326,0.238490624305342,0.571994910780128,0.371457501329565,0.79504962946682,0.860234595106124,2.08284300964557,2.26123176769604,2.09749718104953,1.6507082516404,1.04497483268405,0.516833518338658,0.35576626268671,0.33472061276467,0,0.760272105718513,0,0,2.43042584364528,0.803697554556718,0.673588117878509,0.337834441449967,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0,0.379891534993739,0,0,0.354668382198357,0,2.1349799145941,0,0.622422070799533,1.21239604862719,0.980771418680752,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7223723958405,0,0,0,0.300091096084402,0.412210116953756,0,0,0,0.0974370051611986,0,0,0,0,0.302256294682921,0,1.15956511897978,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.201057944823262,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0.246217006087397,1.40402559083543,0.148631162288728,0.93733833986777,0.503946384596579,0.708875486211932,0.358234090811393,0.290633938513962,0,0.492663237895943,0.352193736052904,0,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,1.21251028578504,0,0,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0.116210378459959,0,0.40101294060657,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,1.13733384070897,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,1.3940745403212,0.308033580176089,1.59691809095107,0,0.18532421910392,0.429374660225974,0,0,0.190630193923825,0,0,0,0,0,0,0,1.01091240786658,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.845086807596724,0,0,0,0,0,0,0.379473173765715,0,0.288666338176536,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,1.22520107990516,0.371606350251437,0,0.0711418433484141,0.478278818186467,0.399158742865633,0.383010740264733,0,1.62310970137278,0,0,1.09675927041116,0,0.846458889008016,0.1605880751037,0.605399121573143,0.851692475380653,0.343505344755765,0.307240764308458,0.447352215784832,0.500547425135725,0.390776190804081,0.556812347790485,2.46174797895425,0,0.66614393599564,0,0.18714054040822,0.439524537815682,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.19924798825107,0,0,0,1.72318727645497,0,0.359473404589307,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.957003479195758,0.274792780205587,0,2.04386596391473,0.156980256395025,0,0.451191321234361,0,0.167821586975843,0,0.794682894901893,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0.626531697032732,0,0,0,0.547364367646998,0.586993856796269,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0.195984794828755,1.21882889212564,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,1.52411997718412,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0.383830394638891,0,0.662091970365432,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,1.40963004463334,0.106787412567695,0,0.414239055347196,0,0,0.852548188666271,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,1.27437413730962,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0,1.94358060540469,0.192914038270915,0,0,0,0,0.138258436151731,1.36402216187572,0.531459361253452,0.490696182767533,0,0,0.633936370075881,2.19986135440423,0.106691729694141,4.13315951185958,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0.527613733078862,0.255524855279191,0,0,0,0,0.443511850813194,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55731135809876,0,0,0.207216164163037,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.845855261818682,0.386747327841463,1.39917618294901,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0.31037357147929,0,0.25458863311266,0,0,0,0.471464371102113,0.0717222053926763,0,0.162806537221949,0,0,0,0,0.244482888365733,0,0,0,0.320568492303233 | ||
|short_description=p14@ARHGDIB | |short_description=p14@ARHGDIB | ||
}} | }} |
Latest revision as of 14:32, 17 September 2015
Short description: | p14@ARHGDIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ARHGDIB_5end |
Coexpression cluster: | NA |
Association with transcript: | -63bp_to_ENST00000542276_5end |
EntrezGene: | ARHGDIB |
HGNC: | 679 |
UniProt: | F5H2R5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 3.81e-17 | 9 |
blood vessel endothelial cell | 4.82e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.82e-11 | 18 |
corneal epithelial cell | 2.41e-09 | 2 |
squamous epithelial cell | 1.29e-08 | 63 |
endothelial cell | 3.77e-08 | 36 |
endothelial cell of vascular tree | 4.95e-08 | 24 |
aortic endothelial cell | 2.18e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 3.81e-17 | 9 |
arterial system endothelium | 3.81e-17 | 9 |
endothelium of artery | 3.81e-17 | 9 |
blood vessel endothelium | 4.82e-11 | 18 |
endothelium | 4.82e-11 | 18 |
cardiovascular system endothelium | 4.82e-11 | 18 |
simple squamous epithelium | 7.48e-09 | 22 |
artery | 2.08e-08 | 42 |
arterial blood vessel | 2.08e-08 | 42 |
arterial system | 2.08e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 3.24e-08 | 83 |
squamous epithelium | 1.14e-07 | 25 |