FFCP PHASE1:Hg19::chr11:31825588..31825613,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4N4,E9PS79 | |UniProt=G3V4N4,E9PS79 | ||
|association_with_transcript=0bp_to_ENST00000470027,ENST00000471303_5end | |association_with_transcript=0bp_to_ENST00000470027,ENST00000471303_5end | ||
|cluster_id=chr11:31825588..31825613,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_8_at_PAX6_5end | |description=CAGE_peak_8_at_PAX6_5end | ||
|id=chr11:31825588..31825613,- | |id=chr11:31825588..31825613,- | ||
|ontology_enrichment_celltype=CL:0000064!5.30e-10!3;CL:0005012!5.30e-10!3;CL:0000067!5.30e-10!3;CL:0002304!5.30e-10!3;CL:0000075!1.98e-07!27;CL:0000306!2.13e-07!4;CL:0002222!2.13e-07!4;CL:0002224!2.13e-07!4 | |ontology_enrichment_celltype=CL:0000064!5.30e-10!3;CL:0005012!5.30e-10!3;CL:0000067!5.30e-10!3;CL:0002304!5.30e-10!3;CL:0000075!1.98e-07!27;CL:0000306!2.13e-07!4;CL:0002222!2.13e-07!4;CL:0002224!2.13e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000064;5.56e-24;3!CL:0000067;5.56e-24;3!CL:0005012;5.56e-24;3!CL:0002304;5.56e-24;3!CL:0000075;8.61e-22;27!CL:0000306;7.42e-18;4!CL:0002222;7.42e-18;4!CL:0002224;7.42e-18;4!CL:0000047;3.49e-16;2!CL:0000710;1.61e-13;20!CL:0002322;3.11e-07;5!CL:0002077;3.54e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.62e-24,3;CL:0000067,3.62e-24,3;CL:0005012,3.62e-24,3;CL:0002304,3.62e-24,3;CL:0000075,8.30e-22,27;CL:0000306,8.34e-18,4;CL:0002222,8.34e-18,4;CL:0002224,8.34e-18,4;CL:0000710,1.49e-13,20;CL:0002077,9.14e-08,34;CL:0002322,2.88e-07,5;CL:0000133,5.00e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.97e-24;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p8@PAX6 | |short_description=p8@PAX6 | ||
}} | }} |
Latest revision as of 14:48, 17 September 2015
Short description: | p8@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PAX6_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000470027, ENST00000471303_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | G3V4N4E9PS79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.62e-24 | 3 |
ciliated epithelial cell | 3.62e-24 | 3 |
multi-ciliated epithelial cell | 3.62e-24 | 3 |
non-pigmented ciliary epithelial cell | 3.62e-24 | 3 |
columnar/cuboidal epithelial cell | 8.30e-22 | 27 |
crystallin accumulating cell | 8.34e-18 | 4 |
vertebrate lens cell | 8.34e-18 | 4 |
lens epithelial cell | 8.34e-18 | 4 |
neurecto-epithelial cell | 1.49e-13 | 20 |
ecto-epithelial cell | 9.14e-08 | 34 |
embryonic stem cell | 2.88e-07 | 5 |
neurectodermal cell | 5.00e-07 | 59 |