FFCP PHASE1:Hg19::chr10:23216941..23216943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=219681 | |EntrezGene=219681 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30964 | |HGNC=30964 | ||
|TSSclassifier=strong | |||
|UniProt=Q5W041 | |UniProt=Q5W041 | ||
|association_with_transcript=-9bp_to_ENST00000298032_5end | |association_with_transcript=-9bp_to_ENST00000298032_5end | ||
|cluster_id=chr10:23216941..23216943,+ | |||
|description=CAGE_peak_3_at_ARMC3_5end | |description=CAGE_peak_3_at_ARMC3_5end | ||
|id=chr10:23216941..23216943,+ | |id=chr10:23216941..23216943,+ | ||
|ontology_enrichment_celltype=CL:1000415!7.01e-07!2 | |ontology_enrichment_celltype=CL:1000415!7.01e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002178;3.27e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,3.27e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.13e-08;10!UBERON:0005564;6.13e-08;10 | |||
|ontology_enrichment_disease=DOID:305!1.82e-09!106;DOID:299!8.30e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002308!4.32e-26!9;UBERON:0000125!4.32e-26!9;UBERON:0001049!6.00e-26!57;UBERON:0005068!6.00e-26!57;UBERON:0006241!6.00e-26!57;UBERON:0007135!6.00e-26!57;UBERON:0002616!7.38e-25!59;UBERON:0002780!1.19e-23!41;UBERON:0001890!1.19e-23!41;UBERON:0006240!1.19e-23!41;UBERON:0003080!5.60e-23!42;UBERON:0000955!8.21e-22!69;UBERON:0006238!8.21e-22!69;UBERON:0002420!1.08e-20!9;UBERON:0007245!1.08e-20!9;UBERON:0010009!1.08e-20!9;UBERON:0010011!1.08e-20!9;UBERON:0000454!1.08e-20!9;UBERON:0009663!1.09e-20!7;UBERON:0002020!1.29e-20!34;UBERON:0003528!1.29e-20!34;UBERON:0001893!1.50e-20!34;UBERON:0005743!1.73e-19!86;UBERON:0001017!5.77e-19!82;UBERON:0002791!9.51e-19!33;UBERON:0003075!3.86e-18!86;UBERON:0007284!3.86e-18!86;UBERON:0003056!7.99e-18!61;UBERON:0007023!4.18e-17!115;UBERON:0002346!4.93e-17!90;UBERON:0000073!5.31e-17!94;UBERON:0001016!5.31e-17!94;UBERON:0001869!7.39e-17!32;UBERON:0000033!1.08e-12!123;UBERON:0000369!1.15e-12!4;UBERON:0002435!1.15e-12!4;UBERON:0000204!1.15e-12!4;UBERON:0010082!1.15e-12!4;UBERON:0000153!8.77e-12!129;UBERON:0007811!8.77e-12!129;UBERON:0005383!3.41e-10!3;UBERON:0005382!3.41e-10!3;UBERON:0000025!5.09e-10!194;UBERON:0006331!1.12e-09!3;UBERON:0002298!2.15e-09!8;UBERON:0004111!8.97e-08!241;UBERON:0000483!2.00e-07!309;UBERON:0000007!2.40e-07!2;UBERON:0004121!2.61e-07!169;UBERON:0000119!2.91e-07!312;UBERON:0001873!3.38e-07!2;UBERON:0010122!3.38e-07!2;UBERON:0001875!3.70e-07!2;UBERON:0006514!3.70e-07!2;UBERON:0002148!4.32e-07!2;UBERON:0009662!4.32e-07!2;UBERON:0000924!5.37e-07!173;UBERON:0006601!5.37e-07!173;UBERON:0002619!5.49e-07!22;UBERON:0000475!8.01e-07!365;UBERON:0002294!8.92e-07!7;UBERON:0001173!8.92e-07!7;UBERON:0004912!8.92e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;3.27e-23;3!UBERON:0005290;3.27e-23;3!UBERON:0000945;1.60e-14;5!UBERON:0010039;1.60e-14;5!UBERON:0002298;2.45e-12;6!UBERON:0000473;1.35e-09;8!UBERON:0003135;2.47e-07;11!UBERON:0004733;7.92e-07;12!UBERON:0002028;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.62e-23,3;UBERON:0005290,2.62e-23,3;UBERON:0010096,2.62e-23,3;UBERON:0002298,2.19e-12,6;UBERON:0000945,1.35e-09,8;UBERON:0010039,1.35e-09,8;UBERON:0000473,1.47e-09,8;UBERON:0003135,2.63e-07,11;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
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| ||
|short_description=p3@ARMC3 | |short_description=p3@ARMC3 | ||
}} | }} |
Latest revision as of 15:28, 17 September 2015
Short description: | p3@ARMC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARMC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000298032_5end |
EntrezGene: | ARMC3 |
HGNC: | 30964 |
UniProt: | Q5W041 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 3.27e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.62e-23 | 3 |
myelencephalon | 2.62e-23 | 3 |
future myelencephalon | 2.62e-23 | 3 |
brainstem | 2.19e-12 | 6 |
stomach | 1.35e-09 | 8 |
food storage organ | 1.35e-09 | 8 |
testis | 1.47e-09 | 8 |
male reproductive organ | 2.63e-07 | 11 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |