FFCP PHASE1:Hg19::chr10:23384529..23384540,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22921 | |EntrezGene=22921 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17061 | |HGNC=17061 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y3D2 | |UniProt=Q9Y3D2 | ||
|association_with_transcript=94bp_to_ENST00000376510_5end | |association_with_transcript=94bp_to_ENST00000376510_5end | ||
|cluster_id=chr10:23384529..23384540,+ | |||
|description=CAGE_peak_2_at_MSRB2_5end | |description=CAGE_peak_2_at_MSRB2_5end | ||
|id=chr10:23384529..23384540,+ | |id=chr10:23384529..23384540,+ | ||
|ontology_enrichment_celltype=CL:0000192!3.14e-08!42;CL:0000514!3.14e-08!42;CL:0000222!2.40e-07!119;CL:0000183!4.62e-07!59;CL:0000680!6.21e-07!57;CL:0000056!6.21e-07!57;CL:0000355!6.21e-07!57;CL:0000187!6.95e-07!54 | |ontology_enrichment_celltype=CL:0000192!3.14e-08!42;CL:0000514!3.14e-08!42;CL:0000222!2.40e-07!119;CL:0000183!4.62e-07!59;CL:0000680!6.21e-07!57;CL:0000056!6.21e-07!57;CL:0000355!6.21e-07!57;CL:0000187!6.95e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.36e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.58e-09,43;CL:0000514,2.58e-09,43;CL:0000359,5.90e-08,32;CL:0000187,1.54e-07,55;CL:0000136,2.24e-07,15;CL:0000680,4.11e-07,58;CL:0000056,4.11e-07,58;CL:0000355,4.11e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.16e-11!143;UBERON:0000468!7.14e-10!659;UBERON:0000914!1.14e-09!83;UBERON:0002329!1.14e-09!83;UBERON:0003077!1.14e-09!83;UBERON:0003059!1.14e-09!83;UBERON:0007282!1.14e-09!83;UBERON:0009618!1.14e-09!83;UBERON:0007285!1.14e-09!83;UBERON:0002385!4.91e-09!63;UBERON:0001015!4.91e-09!63;UBERON:0000383!4.91e-09!63;UBERON:0002100!8.38e-09!216;UBERON:0001134!1.70e-08!61;UBERON:0002036!1.70e-08!61;UBERON:0003082!1.70e-08!61;UBERON:0000467!2.09e-08!625;UBERON:0000480!2.43e-08!626;UBERON:0000481!2.60e-08!347;UBERON:0004290!4.74e-08!70;UBERON:0000486!1.86e-07!82;UBERON:0001981!2.62e-07!60;UBERON:0007500!2.62e-07!60;UBERON:0004537!2.62e-07!60;UBERON:0006965!2.62e-07!60;UBERON:0003914!3.43e-07!118;UBERON:0002049!3.59e-07!79;UBERON:0007798!3.59e-07!79;UBERON:0003104!5.62e-07!238;UBERON:0009142!5.62e-07!238;UBERON:0000055!5.98e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,7.54e-13,160;UBERON:0009142,7.54e-13,160;UBERON:0005256,2.79e-11,122;UBERON:0002385,7.61e-10,64;UBERON:0001015,7.61e-10,64;UBERON:0000383,7.61e-10,64;UBERON:0001134,3.99e-09,62;UBERON:0002036,3.99e-09,62;UBERON:0003082,3.99e-09,62;UBERON:0007524,9.20e-09,73;UBERON:0002100,1.43e-08,199;UBERON:0003077,1.45e-08,72;UBERON:0007285,1.45e-08,72;UBERON:0002329,2.77e-08,71;UBERON:0003059,2.77e-08,71;UBERON:0007282,2.77e-08,71;UBERON:0004290,2.77e-08,71;UBERON:0009618,2.77e-08,71;UBERON:0007503,9.86e-08,78;UBERON:0003914,1.34e-07,117;UBERON:0000486,3.54e-07,83;UBERON:0000490,4.18e-07,148 | |||
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| ||
|short_description=p2@MSRB2 | |short_description=p2@MSRB2 | ||
}} | }} |
Latest revision as of 15:33, 17 September 2015
Short description: | p2@MSRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MSRB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 94bp_to_ENST00000376510_5end |
EntrezGene: | MSRB2 |
HGNC: | 17061 |
UniProt: | Q9Y3D2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.58e-09 | 43 |
smooth muscle myoblast | 2.58e-09 | 43 |
vascular associated smooth muscle cell | 5.90e-08 | 32 |
muscle cell | 1.54e-07 | 55 |
fat cell | 2.24e-07 | 15 |
muscle precursor cell | 4.11e-07 | 58 |
myoblast | 4.11e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.11e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 7.54e-13 | 160 |
entire embryonic mesenchyme | 7.54e-13 | 160 |
trunk mesenchyme | 2.79e-11 | 122 |
muscle tissue | 7.61e-10 | 64 |
musculature | 7.61e-10 | 64 |
musculature of body | 7.61e-10 | 64 |
skeletal muscle tissue | 3.99e-09 | 62 |
striated muscle tissue | 3.99e-09 | 62 |
myotome | 3.99e-09 | 62 |
dense mesenchyme tissue | 9.20e-09 | 73 |
trunk | 1.43e-08 | 199 |
paraxial mesoderm | 1.45e-08 | 72 |
presumptive paraxial mesoderm | 1.45e-08 | 72 |
somite | 2.77e-08 | 71 |
presomitic mesoderm | 2.77e-08 | 71 |
presumptive segmental plate | 2.77e-08 | 71 |
dermomyotome | 2.77e-08 | 71 |
trunk paraxial mesoderm | 2.77e-08 | 71 |
epithelial vesicle | 9.86e-08 | 78 |
epithelial tube | 1.34e-07 | 117 |
multilaminar epithelium | 3.54e-07 | 83 |
unilaminar epithelium | 4.18e-07 | 148 |