FFCP PHASE1:Hg19::chr1:33896662..33896679,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1912 | |EntrezGene=1912 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3183 | |HGNC=3183 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000484692_5end | |association_with_transcript=-9bp_to_ENST00000484692_5end | ||
|cluster_id=chr1:33896662..33896679,- | |||
|description=CAGE_peak_7_at_PHC2_5end | |description=CAGE_peak_7_at_PHC2_5end | ||
|id=chr1:33896662..33896679,- | |id=chr1:33896662..33896679,- | ||
|ontology_enrichment_celltype=CL:0002057!1.03e-17!42;CL:0000860!3.06e-15!45;CL:0002194!7.90e-15!63;CL:0000576!7.90e-15!63;CL:0000040!7.90e-15!63;CL:0000559!7.90e-15!63;CL:0002009!1.06e-13!65;CL:0000839!1.35e-11!70;CL:0000557!3.79e-11!71;CL:0000766!9.26e-10!76 | |ontology_enrichment_celltype=CL:0002057!1.03e-17!42;CL:0000860!3.06e-15!45;CL:0002194!7.90e-15!63;CL:0000576!7.90e-15!63;CL:0000040!7.90e-15!63;CL:0000559!7.90e-15!63;CL:0002009!1.06e-13!65;CL:0000839!1.35e-11!70;CL:0000557!3.79e-11!71;CL:0000766!9.26e-10!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.08e-24;33!CL:0002057;9.08e-24;33!CL:0000473;7.08e-18;39!CL:0000234;7.08e-18;39!CL:0000576;2.25e-11;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.27e-19,48;CL:0000234,8.27e-19,48;CL:0000860,1.19e-18,42;CL:0002057,1.19e-18,42;CL:0002194,2.02e-16,59;CL:0000576,2.02e-16,59;CL:0000040,2.02e-16,59;CL:0000559,2.02e-16,59;CL:0002009,1.20e-15,61;CL:0000839,6.38e-14,66;CL:0000557,1.31e-13,67;CL:0000766,3.54e-12,72;CL:0000763,5.67e-08,108;CL:0000049,5.67e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.38e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.25e-12!94;UBERON:0001016!1.25e-12!94;UBERON:0000468!3.31e-12!659;UBERON:0000467!9.83e-12!625;UBERON:0000480!1.47e-11!626;UBERON:0002346!1.47e-11!90;UBERON:0003075!1.81e-11!86;UBERON:0007284!1.81e-11!86;UBERON:0005743!2.29e-11!86;UBERON:0002371!3.95e-11!80;UBERON:0002616!1.59e-10!59;UBERON:0001049!2.18e-10!57;UBERON:0005068!2.18e-10!57;UBERON:0006241!2.18e-10!57;UBERON:0007135!2.18e-10!57;UBERON:0001017!2.81e-10!82;UBERON:0001474!3.24e-10!86;UBERON:0000955!3.58e-10!69;UBERON:0006238!3.58e-10!69;UBERON:0002204!4.51e-10!167;UBERON:0000923!5.55e-10!604;UBERON:0005291!5.55e-10!604;UBERON:0006598!5.55e-10!604;UBERON:0002532!5.55e-10!604;UBERON:0002050!8.04e-10!605;UBERON:0005423!8.04e-10!605;UBERON:0000922!1.21e-09!612;UBERON:0004765!2.52e-09!101;UBERON:0001434!2.52e-09!101;UBERON:0003056!5.96e-08!61;UBERON:0000033!1.30e-07!123;UBERON:0002193!1.97e-07!112;UBERON:0002390!2.26e-07!102;UBERON:0003061!2.26e-07!102;UBERON:0000062!2.62e-07!511;UBERON:0003080!2.73e-07!42;UBERON:0002405!2.99e-07!115;UBERON:0007023!3.19e-07!115;UBERON:0002780!5.36e-07!41;UBERON:0001890!5.36e-07!41;UBERON:0006240!5.36e-07!41;UBERON:0000479!7.77e-07!787;UBERON:0000153!8.01e-07!129;UBERON:0007811!8.01e-07!129;UBERON:0000924!9.86e-07!173;UBERON:0006601!9.86e-07!173 | |ontology_enrichment_uberon=UBERON:0000073!1.25e-12!94;UBERON:0001016!1.25e-12!94;UBERON:0000468!3.31e-12!659;UBERON:0000467!9.83e-12!625;UBERON:0000480!1.47e-11!626;UBERON:0002346!1.47e-11!90;UBERON:0003075!1.81e-11!86;UBERON:0007284!1.81e-11!86;UBERON:0005743!2.29e-11!86;UBERON:0002371!3.95e-11!80;UBERON:0002616!1.59e-10!59;UBERON:0001049!2.18e-10!57;UBERON:0005068!2.18e-10!57;UBERON:0006241!2.18e-10!57;UBERON:0007135!2.18e-10!57;UBERON:0001017!2.81e-10!82;UBERON:0001474!3.24e-10!86;UBERON:0000955!3.58e-10!69;UBERON:0006238!3.58e-10!69;UBERON:0002204!4.51e-10!167;UBERON:0000923!5.55e-10!604;UBERON:0005291!5.55e-10!604;UBERON:0006598!5.55e-10!604;UBERON:0002532!5.55e-10!604;UBERON:0002050!8.04e-10!605;UBERON:0005423!8.04e-10!605;UBERON:0000922!1.21e-09!612;UBERON:0004765!2.52e-09!101;UBERON:0001434!2.52e-09!101;UBERON:0003056!5.96e-08!61;UBERON:0000033!1.30e-07!123;UBERON:0002193!1.97e-07!112;UBERON:0002390!2.26e-07!102;UBERON:0003061!2.26e-07!102;UBERON:0000062!2.62e-07!511;UBERON:0003080!2.73e-07!42;UBERON:0002405!2.99e-07!115;UBERON:0007023!3.19e-07!115;UBERON:0002780!5.36e-07!41;UBERON:0001890!5.36e-07!41;UBERON:0006240!5.36e-07!41;UBERON:0000479!7.77e-07!787;UBERON:0000153!8.01e-07!129;UBERON:0007811!8.01e-07!129;UBERON:0000924!9.86e-07!173;UBERON:0006601!9.86e-07!173 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.81e-14,76;UBERON:0002405,2.71e-13,93;UBERON:0001474,7.74e-13,82;UBERON:0001434,8.46e-13,100;UBERON:0004765,4.72e-12,90;UBERON:0002204,1.35e-11,167;UBERON:0002390,3.74e-11,98;UBERON:0003061,3.74e-11,98;UBERON:0002193,2.75e-10,108;UBERON:0003081,1.23e-07,203;UBERON:0000923,9.31e-07,560;UBERON:0010316,9.31e-07,560;UBERON:0005291,9.31e-07,560;UBERON:0006598,9.31e-07,560;UBERON:0010317,9.31e-07,560;UBERON:0002532,9.31e-07,560 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,1.47440361900905,0,0,0,0.123766352960047,0,0,0,0,0,0.861847406537515,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0.293600439334847,0,0.802177789880567,0.434021741431704,0.895661896959697,0.32389366601898,1.54545340580512,2.76256653681173,4.91238726795452,3.39617685662943,1.39457422143411,2.46700732813095,0.929119112685311,0.28769239232215,3.07392847834921,1.18241114944293,1.03423704220986,0.645484683583826,1.35426486594342,2.82363509313907,2.18324920046277,1.57306439111559,1.22433556948361,1.92557416245656,1.91801137739712,0.989553900560148,2.19410023383795,0.852449501065388,0.290209238628584,2.8369261234557,1.24564449799115,1.50749199154046,2.60741459210101,1.52032191293582,0,1.10483290796269,0.949387162322653,0.845021145247767,0.425208599930087,0.628975936525128,0.44931452458598,0.750884464207532,0.803627933485401,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0.283604451492204,0.221729397462564,0.43917392846563,1.0478326039817,0,0,0,0.522389211897802,0.398873881556595,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0.419499436209906,0,0.626984899610432,0.775250277507987,0.35576626268671,0.33472061276467,0.402829317109147,1.52054421143703,0.24406205754817,1.10298924103761,0.81014194788176,0.446498641420399,0.673588117878509,0.337834441449967,1.53316637465883,0.949265659568129,0.549605231791222,0,0,0,0.993943903390637,0.379891534993739,0.264818361626438,1.14734648299525,0,0,0,0,0.311211035399766,0,0.163461903113459,0.605429710579726,0.576175924479999,1.17160715916898,0.936480230490962,2.2818872861778,0.149448680551801,1.40921398372518,0.971237666208789,1.82586048712923,1.22492502752936,1.22834317311768,1.65321249881225,0,0,1.82032272387605,0.718618141816238,1.0100166837244,0.625592599359821,1.38532057742091,0,0,0.300476117813194,0,0.717558542755448,0.427114777637135,0.423863802319124,0,0.721367704669072,0.515281080091258,0.558350568994769,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0.323292113637624,0.710019185033229,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0.977424915930974,2.07986957055916,0,0.811512834825538,0.117408694235822,0,0,0,0,0,1.23108503043699,1.40402559083543,0.445893486866185,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0.507983154337352,0,2.34434894420094,0,0.616964956219941,0.600686115687835,0.285826432630578,2.46688385559794,0,1.10007428731425,0.387815147273333,7.15312891703765,2.535908257668,0.531876233169741,0,1.28603687131071,0,1.0656887160644,0.142977993658148,1.62786481617433,0,0.65147236858747,1.06617584622764,0,0.904318131178758,0.871533458600294,0.299918973546171,0,0.502257091432126,0,0.479249710983165,0,1.42636905040718,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0.256686072559497,0.254094624222463,1.30139853857622,0,0.670065061337395,0,0,0,0,0.613457458595699,1.50051156317903,0.542530047399471,0,0.178428988797162,0,0.468565659970853,0,0,0,0,0.368738337083406,0.0868836144680828,1.17480694477644,2.74514739048685,0,0.647142602455851,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0,0,0.925258162815933,0.710246901252508,0.98552587216571,0,0.464841513839837,0,0,0.0920809889358963,0.114814448164607,0.910455840033585,0.524497659837696,0,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0.512900250232778,1.31205858279882,0.325378394664303,0.412164046590889,0.457847324091717,0.082509499920588,0.574265537996172,0,0,1.35339005608971,0,0.307007349452259,1.24052915236078,0.429680979473094,0.435050081742686,0.767039646744908,0.801288320820636,0,0,0,0,0,0,1.3940745403212,1.23213432070436,1.06461206063404,0.869932992075073,0.18532421910392,0.143124886741991,0.744316738719335,0.316379424718726,0.38126038784765,0.511795582622668,0.855877976067841,1.27281299170375,0,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0.487426979262569,0,0.409499734223957,0.141405431953713,1.13008116620243,0,0,0,1.15755106853338,0,1.01455188481352,0,0.563391205064483,0.143411352204052,0.0982490410131212,1.426684205925,1.06428319221179,0.211107635297664,0,1.13841952129715,0.699869440489966,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,1.2700414963433,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,1.4098700508785,0,0.586032717087576,0.606802608747567,0,0.284136146806413,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0,0.276283915531148,0.2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| ||
|short_description=p7@PHC2 | |short_description=p7@PHC2 | ||
}} | }} |
Latest revision as of 17:24, 17 September 2015
Short description: | p7@PHC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PHC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000484692_5end |
EntrezGene: | PHC2 |
HGNC: | 3183 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.27e-19 | 48 |
phagocyte | 8.27e-19 | 48 |
classical monocyte | 1.19e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-18 | 42 |
monopoietic cell | 2.02e-16 | 59 |
monocyte | 2.02e-16 | 59 |
monoblast | 2.02e-16 | 59 |
promonocyte | 2.02e-16 | 59 |
macrophage dendritic cell progenitor | 1.20e-15 | 61 |
myeloid lineage restricted progenitor cell | 6.38e-14 | 66 |
granulocyte monocyte progenitor cell | 1.31e-13 | 67 |
myeloid leukocyte | 3.54e-12 | 72 |
myeloid cell | 5.67e-08 | 108 |
common myeloid progenitor | 5.67e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.81e-14 | 76 |
immune system | 2.71e-13 | 93 |
bone element | 7.74e-13 | 82 |
skeletal system | 8.46e-13 | 100 |
skeletal element | 4.72e-12 | 90 |
musculoskeletal system | 1.35e-11 | 167 |
hematopoietic system | 3.74e-11 | 98 |
blood island | 3.74e-11 | 98 |
hemolymphoid system | 2.75e-10 | 108 |
lateral plate mesoderm | 1.23e-07 | 203 |
germ layer | 9.31e-07 | 560 |
germ layer / neural crest | 9.31e-07 | 560 |
embryonic tissue | 9.31e-07 | 560 |
presumptive structure | 9.31e-07 | 560 |
germ layer / neural crest derived structure | 9.31e-07 | 560 |
epiblast (generic) | 9.31e-07 | 560 |