FFCP PHASE1:Hg19::chr4:40192626..40192646,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399 | |EntrezGene=399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |HGNC=686 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000505618_5end | |association_with_transcript=-26bp_to_ENST00000505618_5end | ||
|cluster_id=chr4:40192626..40192646,+ | |||
|description=CAGE_peak_9_at_RHOH_5end | |description=CAGE_peak_9_at_RHOH_5end | ||
|id=chr4:40192626..40192646,+ | |id=chr4:40192626..40192646,+ | ||
|ontology_enrichment_celltype=CL:0000542!8.71e-33!53;CL:0000051!8.71e-33!53;CL:0000838!4.13e-31!52;CL:0000791!1.92e-26!18;CL:0000789!1.92e-26!18;CL:0002420!1.92e-26!18;CL:0002419!1.92e-26!18;CL:0000790!1.92e-26!18;CL:0000084!2.16e-26!25;CL:0000827!2.16e-26!25;CL:0002087!1.21e-17!119;CL:0000625!2.01e-16!11;CL:0000738!1.61e-14!140;CL:0000624!1.03e-13!6;CL:0002031!2.69e-12!124;CL:0000037!1.18e-10!172;CL:0000566!1.18e-10!172;CL:0000988!1.60e-09!182;CL:0002032!1.91e-08!165;CL:0000837!1.91e-08!165;CL:0000898!5.72e-08!3;CL:0000842!2.18e-07!3 | |ontology_enrichment_celltype=CL:0000542!8.71e-33!53;CL:0000051!8.71e-33!53;CL:0000838!4.13e-31!52;CL:0000791!1.92e-26!18;CL:0000789!1.92e-26!18;CL:0002420!1.92e-26!18;CL:0002419!1.92e-26!18;CL:0000790!1.92e-26!18;CL:0000084!2.16e-26!25;CL:0000827!2.16e-26!25;CL:0002087!1.21e-17!119;CL:0000625!2.01e-16!11;CL:0000738!1.61e-14!140;CL:0000624!1.03e-13!6;CL:0002031!2.69e-12!124;CL:0000037!1.18e-10!172;CL:0000566!1.18e-10!172;CL:0000988!1.60e-09!182;CL:0002032!1.91e-08!165;CL:0000837!1.91e-08!165;CL:0000898!5.72e-08!3;CL:0000842!2.18e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000084;6.66e-29;25!CL:0000791;1.52e-28;18!CL:0000789;1.52e-28;18!CL:0002419;1.52e-28;18!CL:0000625;1.21e-23;11!CL:0000542;3.88e-09;53!CL:0000624;1.06e-08;6!CL:0000898;2.55e-08;3!CL:0000226;6.50e-08;3!CL:0000842;6.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.85e-29,25;CL:0000827,6.85e-29,25;CL:0000791,1.42e-28,18;CL:0000789,1.42e-28,18;CL:0002420,1.42e-28,18;CL:0002419,1.42e-28,18;CL:0000790,1.42e-28,18;CL:0000625,1.01e-23,11;CL:0000542,1.39e-14,53;CL:0000051,1.39e-14,53;CL:0000838,1.19e-12,52;CL:0000624,1.15e-08,6;CL:0000898,2.37e-08,3;CL:0000226,5.85e-08,3;CL:0000842,5.85e-08,3;CL:0002087,2.62e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;1.52e-28;18!CL:0000051;3.88e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.47e-13!15;UBERON:0000179!1.47e-13!15;UBERON:0000463!1.47e-13!15;UBERON:0004177!2.11e-11!7;UBERON:0002106!9.70e-07!3;UBERON:0004854!9.70e-07!3;UBERON:0009034!9.70e-07!3;UBERON:0002095!9.70e-07!3;UBERON:0004782!9.70e-07!3;UBERON:0003281!9.70e-07!3;UBERON:0009664!9.70e-07!3;UBERON:0002296!9.70e-07!3;UBERON:0005602!9.70e-07!3;UBERON:0001179!9.70e-07!3;UBERON:0006293!9.70e-07!3 | |ontology_enrichment_uberon=UBERON:0000178!1.47e-13!15;UBERON:0000179!1.47e-13!15;UBERON:0000463!1.47e-13!15;UBERON:0004177!2.11e-11!7;UBERON:0002106!9.70e-07!3;UBERON:0004854!9.70e-07!3;UBERON:0009034!9.70e-07!3;UBERON:0002095!9.70e-07!3;UBERON:0004782!9.70e-07!3;UBERON:0003281!9.70e-07!3;UBERON:0009664!9.70e-07!3;UBERON:0002296!9.70e-07!3;UBERON:0005602!9.70e-07!3;UBERON:0001179!9.70e-07!3;UBERON:0006293!9.70e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.32e-12;2!UBERON:0005058;1.32e-12;2!UBERON:0009113;1.32e-12;2!UBERON:0000178;4.07e-12;15!UBERON:0000179;4.07e-12;15!UBERON:0000463;4.07e-12;15!UBERON:0002390;2.04e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.08e-13,4;UBERON:0005058,3.08e-13,4;UBERON:0009113,3.08e-13,4;UBERON:0003295,3.08e-13,4;UBERON:0005562,3.08e-13,4;UBERON:0000178,3.49e-12,15;UBERON:0000179,3.49e-12,15;UBERON:0000463,3.49e-12,15;UBERON:0003351,5.58e-09,6;UBERON:0001042,6.12e-09,10;UBERON:0009145,6.12e-09,10;UBERON:0006562,3.91e-08,11;UBERON:0004177,9.32e-08,7;UBERON:0005057,9.32e-08,7 | |||
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| ||
|short_description=p9@RHOH | |short_description=p9@RHOH | ||
}} | }} |
Latest revision as of 17:58, 17 September 2015
Short description: | p9@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RHOH_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_ENST00000505618_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.85e-29 | 25 |
pro-T cell | 6.85e-29 | 25 |
mature alpha-beta T cell | 1.42e-28 | 18 |
alpha-beta T cell | 1.42e-28 | 18 |
immature T cell | 1.42e-28 | 18 |
mature T cell | 1.42e-28 | 18 |
immature alpha-beta T cell | 1.42e-28 | 18 |
CD8-positive, alpha-beta T cell | 1.01e-23 | 11 |
lymphocyte | 1.39e-14 | 53 |
common lymphoid progenitor | 1.39e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.19e-12 | 52 |
CD4-positive, alpha-beta T cell | 1.15e-08 | 6 |
naive T cell | 2.37e-08 | 3 |
single nucleate cell | 5.85e-08 | 3 |
mononuclear cell | 5.85e-08 | 3 |
nongranular leukocyte | 2.62e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.08e-13 | 4 |
hemolymphoid system gland | 3.08e-13 | 4 |
thymic region | 3.08e-13 | 4 |
pharyngeal gland | 3.08e-13 | 4 |
thymus primordium | 3.08e-13 | 4 |
blood | 3.49e-12 | 15 |
haemolymphatic fluid | 3.49e-12 | 15 |
organism substance | 3.49e-12 | 15 |
pharyngeal epithelium | 5.58e-09 | 6 |
chordate pharynx | 6.12e-09 | 10 |
pharyngeal region of foregut | 6.12e-09 | 10 |
pharynx | 3.91e-08 | 11 |
hemopoietic organ | 9.32e-08 | 7 |
immune organ | 9.32e-08 | 7 |