FFCP PHASE1:Hg19::chr5:35195338..35195352,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5618 | |EntrezGene=5618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9446 | |HGNC=9446 | ||
|TSSclassifier=strong | |||
|UniProt=D6RD41 | |UniProt=D6RD41 | ||
|association_with_transcript=0bp_to_ENST00000509839_5end | |association_with_transcript=0bp_to_ENST00000509839_5end | ||
|cluster_id=chr5:35195338..35195352,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_6_at_PRLR_5end | |description=CAGE_peak_6_at_PRLR_5end | ||
|id=chr5:35195338..35195352,- | |id=chr5:35195338..35195352,- | ||
|ontology_enrichment_celltype=CL:0002619!4.08e-09!3;CL:0002194!1.35e-08!63;CL:0000576!1.35e-08!63;CL:0000040!1.35e-08!63;CL:0000559!1.35e-08!63;CL:0002009!3.39e-08!65;CL:0000839!2.65e-07!70;CL:0000766!3.30e-07!76;CL:0000557!3.86e-07!71 | |ontology_enrichment_celltype=CL:0002619!4.08e-09!3;CL:0002194!1.35e-08!63;CL:0000576!1.35e-08!63;CL:0000040!1.35e-08!63;CL:0000559!1.35e-08!63;CL:0002009!3.39e-08!65;CL:0000839!2.65e-07!70;CL:0000766!3.30e-07!76;CL:0000557!3.86e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002619;6.13e-29;3!CL:0000235;3.14e-14;6!CL:0000182;1.54e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,6.14e-29,3;CL:0000235,2.62e-14,6;CL:0000182,1.77e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.17e-13;11!UBERON:0009497;1.37e-11;13!UBERON:0003104;2.99e-10;31!UBERON:0006222;3.45e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.60e-18!115;UBERON:0000369!5.61e-11!4;UBERON:0002435!5.61e-11!4;UBERON:0000204!5.61e-11!4;UBERON:0010082!5.61e-11!4;UBERON:0009663!3.12e-09!7;UBERON:0000062!4.88e-09!511;UBERON:0005383!1.13e-08!3;UBERON:0005382!1.13e-08!3;UBERON:0002405!1.61e-08!115;UBERON:0006947!4.34e-08!3;UBERON:0004054!4.34e-08!3;UBERON:0002780!8.04e-08!41;UBERON:0001890!8.04e-08!41;UBERON:0006240!8.04e-08!41;UBERON:0003080!1.45e-07!42;UBERON:0002308!4.59e-07!9;UBERON:0002420!4.59e-07!9;UBERON:0000125!4.59e-07!9;UBERON:0007245!4.59e-07!9;UBERON:0010009!4.59e-07!9;UBERON:0010011!4.59e-07!9;UBERON:0000454!4.59e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;6.50e-21;4!UBERON:0002435;6.50e-21;4!UBERON:0000204;6.50e-21;4!UBERON:0002108;1.02e-16;4!UBERON:0005383;3.68e-13;3!UBERON:0005382;3.68e-13;3!UBERON:0009663;3.28e-12;7!UBERON:0001874;1.98e-10;1!UBERON:0001882;3.45e-10;1!UBERON:0001301;3.45e-10;1!UBERON:0005403;3.45e-10;1!UBERON:0002420;1.29e-09;9!UBERON:0000125;1.29e-09;9!UBERON:0007245;1.29e-09;9!UBERON:0002308;1.29e-09;9!UBERON:0010009;1.29e-09;9!UBERON:0010011;1.29e-09;9!UBERON:0000454;1.29e-09;9!UBERON:0002107;5.60e-08;19!UBERON:0006925;5.60e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.45e-21,4;UBERON:0002435,7.45e-21,4;UBERON:0000204,7.45e-21,4;UBERON:0010082,7.45e-21,4;UBERON:0002108,1.02e-16,4;UBERON:0005383,4.03e-13,3;UBERON:0005382,4.03e-13,3;UBERON:0009663,3.54e-12,7;UBERON:0001874,2.08e-10,1;UBERON:0001301,3.01e-10,1;UBERON:0001882,3.61e-10,1;UBERON:0005403,3.61e-10,1;UBERON:0002420,1.37e-09,9;UBERON:0000125,1.37e-09,9;UBERON:0007245,1.37e-09,9;UBERON:0002308,1.37e-09,9;UBERON:0010009,1.37e-09,9;UBERON:0010011,1.37e-09,9;UBERON:0000454,1.37e-09,9;UBERON:0002107,6.09e-08,19;UBERON:0006925,6.09e-08,19;UBERON:0008836,6.09e-08,19;UBERON:0005172,1.55e-07,54;UBERON:0005173,1.55e-07,54;UBERON:0008835,7.09e-07,22;UBERON:0003894,7.09e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,13.2110129801555,4.85840499028469,12.1060516788068,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0.174129737299267,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,3.25610384288601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,1.1713222286267,0,0,0,0.394584402849391,2.41981432097328,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,1.16495949527454,4.01794229766841,4.86253564448882,4.31382680666783,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,3.30983970656632,1.94081976099493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41304295212211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.270150338473579,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0.682986574053893,0.443511850813194,0,0,0.135939465953663,0,0,0,0.235479278551542,2.35673384874003,0.840816489941367,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00326405540328,3.71551252856727,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.985123076837112,0.535928260312357,0,0.310298987585686,0,0.23806443146374,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,13.2110129801555,4.85840499028469,12.1060516788068,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0.174129737299267,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,3.25610384288601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,1.1713222286267,0,0,0,0.394584402849391,2.41981432097328,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,1.16495949527454,4.01794229766841,4.86253564448882,4.31382680666783,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,3.30983970656632,1.94081976099493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41304295212211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.270150338473579,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0.682986574053893,0.443511850813194,0,0,0.135939465953663,0,0,0,0.235479278551542,2.35673384874003,0.840816489941367,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00326405540328,3.71551252856727,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.985123076837112,0.535928260312357,0,0.310298987585686,0,0.23806443146374,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@PRLR | |short_description=p6@PRLR | ||
}} | }} |
Latest revision as of 18:12, 17 September 2015
Short description: | p6@PRLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRLR_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000509839_5end |
EntrezGene: | PRLR |
HGNC: | 9446 |
UniProt: | D6RD41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 6.14e-29 | 3 |
macrophage | 2.62e-14 | 6 |
hepatocyte | 1.77e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 7.45e-21 | 4 |
striatum | 7.45e-21 | 4 |
ventral part of telencephalon | 7.45e-21 | 4 |
future corpus striatum | 7.45e-21 | 4 |
small intestine | 1.02e-16 | 4 |
caudate-putamen | 4.03e-13 | 3 |
dorsal striatum | 4.03e-13 | 3 |
telencephalic nucleus | 3.54e-12 | 7 |
putamen | 2.08e-10 | 1 |
epididymis | 3.01e-10 | 1 |
nucleus accumbens | 3.61e-10 | 1 |
ventral striatum | 3.61e-10 | 1 |
basal ganglion | 1.37e-09 | 9 |
neural nucleus | 1.37e-09 | 9 |
nuclear complex of neuraxis | 1.37e-09 | 9 |
nucleus of brain | 1.37e-09 | 9 |
aggregate regional part of brain | 1.37e-09 | 9 |
collection of basal ganglia | 1.37e-09 | 9 |
cerebral subcortex | 1.37e-09 | 9 |
liver | 6.09e-08 | 19 |
digestive gland | 6.09e-08 | 19 |
liver bud | 6.09e-08 | 19 |
abdomen element | 1.55e-07 | 54 |
abdominal segment element | 1.55e-07 | 54 |
hepatic diverticulum | 7.09e-07 | 22 |
liver primordium | 7.09e-07 | 22 |