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FFCP PHASE1:Hg19::chr1:35658736..35658754,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=6421
|EntrezGene=6421
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=10774
|HGNC=10774
|TSSclassifier=strong
|UniProt=P23246,Q86VG2
|UniProt=P23246,Q86VG2
|association_with_transcript=0bp_to_ENST00000357214,NM_005066,uc001bys.2_5end
|association_with_transcript=0bp_to_ENST00000357214,NM_005066,uc001bys.2_5end
|cluster_id=chr1:35658736..35658754,-
|description=CAGE_peak_1_at_SFPQ_5end
|description=CAGE_peak_1_at_SFPQ_5end
|id=chr1:35658736..35658754,-
|id=chr1:35658736..35658754,-
|ontology_enrichment_celltype=CL:0000988!2.19e-13!182;CL:0000037!2.96e-13!172;CL:0000566!2.96e-13!172;CL:0000860!5.98e-12!45;CL:0002032!9.33e-12!165;CL:0000837!9.33e-12!165;CL:0002057!1.69e-11!42;CL:0000763!2.52e-10!112;CL:0000049!2.52e-10!112;CL:0002087!2.89e-08!119;CL:0000738!3.96e-08!140;CL:0002031!7.08e-08!124;CL:0000557!8.12e-08!71;CL:0000766!8.23e-07!76;CL:0000839!9.79e-07!70
|ontology_enrichment_celltype=CL:0000988!2.19e-13!182;CL:0000037!2.96e-13!172;CL:0000566!2.96e-13!172;CL:0000860!5.98e-12!45;CL:0002032!9.33e-12!165;CL:0000837!9.33e-12!165;CL:0002057!1.69e-11!42;CL:0000763!2.52e-10!112;CL:0000049!2.52e-10!112;CL:0002087!2.89e-08!119;CL:0000738!3.96e-08!140;CL:0002031!7.08e-08!124;CL:0000557!8.12e-08!71;CL:0000766!8.23e-07!76;CL:0000839!9.79e-07!70
|ontology_enrichment_celltype_v019=CL:0000860;3.41e-14;33!CL:0002057;3.41e-14;33!CL:0000473;2.24e-07;39!CL:0000234;2.24e-07;39
|ontology_enrichment_celltype_v019_2=CL:0000037,8.45e-13,168;CL:0000988,9.61e-13,177;CL:0000860,1.69e-11,42;CL:0002057,1.69e-11,42;CL:0002032,2.56e-11,161;CL:0000837,2.56e-11,161;CL:0000763,6.59e-10,108;CL:0000049,6.59e-10,108;CL:0002087,7.16e-08,115;CL:0000738,9.67e-08,136;CL:0002031,1.73e-07,120;CL:0000557,2.01e-07,67;CL:0000473,3.11e-07,48;CL:0000234,3.11e-07,48
|ontology_enrichment_development_v019=CL:0002057;4.31e-09;42
|ontology_enrichment_disease=DOID:162!2.18e-15!235;DOID:14566!4.21e-14!239;DOID:0050687!5.69e-10!143;DOID:2531!5.85e-10!51;DOID:0060083!5.85e-10!51;DOID:1240!6.36e-09!39;DOID:0050686!8.79e-08!137;DOID:8692!9.89e-08!31
|ontology_enrichment_disease=DOID:162!2.18e-15!235;DOID:14566!4.21e-14!239;DOID:0050687!5.69e-10!143;DOID:2531!5.85e-10!51;DOID:0060083!5.85e-10!51;DOID:1240!6.36e-09!39;DOID:0050686!8.79e-08!137;DOID:8692!9.89e-08!31
|ontology_enrichment_disease_v019=DOID:8692;1.30e-07;31!DOID:1240;1.42e-07;39
|ontology_enrichment_disease_v019_2=DOID:162,2.18e-15,235;DOID:14566,4.21e-14,239;DOID:0050687,5.69e-10,143;DOID:2531,5.85e-10,51;DOID:0060083,5.85e-10,51;DOID:1240,6.36e-09,39;DOID:0050686,8.79e-08,137;DOID:8692,9.89e-08,31
|ontology_enrichment_uberon=UBERON:0001474!1.54e-07!86
|ontology_enrichment_uberon=UBERON:0001474!1.54e-07!86
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.80e-07,82
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|short_description=p1@SFPQ
|short_description=p1@SFPQ
}}
}}

Latest revision as of 18:29, 17 September 2015

Short description:p1@SFPQ
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_SFPQ_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENST00000357214, NM_005066, uc001bys.2_5end
EntrezGene:SFPQ
HGNC: 10774
UniProt: P23246Q86VG2
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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