FFCP PHASE1:Hg19::chr12:25055107..25055119,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=976 | |||
|TSSclassifier=strong | |||
|UniProt=Q68DQ7 | |||
|association_with_transcript=110bp_to_ENST00000538118_5end | |||
|cluster_id=chr12:25055107..25055119,- | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_9_at_BCAT1_5end | |||
|id=chr12:25055107..25055119,- | |||
|ontology_enrichment_celltype=CL:0002139!1.90e-25!24;CL:0000115!6.08e-20!35;CL:0000071!6.93e-19!18;CL:0002546!6.93e-19!18;CL:0002078!4.77e-14!44;CL:1000413!3.61e-10!9;CL:0002544!1.54e-09!6;CL:0000213!5.32e-09!57;CL:0000215!5.32e-09!57;CL:0005020!3.95e-08!6;CL:0002138!3.95e-08!6;CL:0005022!3.95e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.73e-52;24!CL:0000071;2.80e-49;18!CL:0000115;1.12e-28;36!CL:0002544;2.76e-25;6!CL:1000413;3.00e-22;9!CL:0002078;2.65e-18;45!CL:0002543;1.02e-16;6!CL:0002144;3.38e-14;3!CL:0000213;6.61e-13;58!CL:0000215;6.61e-13;58!CL:0002618;6.66e-13;3!CL:0000039;1.16e-10;7!CL:0000586;1.16e-10;7!CL:0002545;8.18e-10;2!CL:0000076;4.77e-08;63!CL:0000235;7.67e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.29e-53,24;CL:0000071,7.75e-50,18;CL:0002546,7.75e-50,18;CL:0000115,1.17e-37,36;CL:0002078,3.49e-29,45;CL:0002544,1.18e-25,6;CL:1000413,1.59e-22,9;CL:0000213,1.35e-21,58;CL:0000215,1.35e-21,58;CL:0002543,5.89e-17,6;CL:0002144,3.26e-14,3;CL:0002618,6.84e-13,3;CL:0000076,1.02e-11,63;CL:0000039,1.17e-10,7;CL:0000586,1.17e-10,7;CL:0000222,3.05e-10,121;CL:0002545,6.47e-10,2;CL:0000235,7.31e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.80e-49;18!UBERON:0009117;1.87e-07;10!UBERON:0005564;1.87e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.93e-19!18;UBERON:0004638!6.93e-19!18;UBERON:0004852!6.93e-19!18;UBERON:0003075!1.05e-15!86;UBERON:0007284!1.05e-15!86;UBERON:0001049!1.07e-15!57;UBERON:0005068!1.07e-15!57;UBERON:0006241!1.07e-15!57;UBERON:0007135!1.07e-15!57;UBERON:0000073!1.07e-14!94;UBERON:0001016!1.07e-14!94;UBERON:0002346!1.99e-14!90;UBERON:0000487!2.13e-14!22;UBERON:0003056!2.40e-13!61;UBERON:0002020!2.49e-13!34;UBERON:0003528!2.49e-13!34;UBERON:0002780!3.49e-13!41;UBERON:0001890!3.49e-13!41;UBERON:0006240!3.49e-13!41;UBERON:0001893!5.93e-13!34;UBERON:0003080!1.08e-12!42;UBERON:0002616!1.27e-12!59;UBERON:0002791!3.12e-12!33;UBERON:0005743!3.78e-12!86;UBERON:0006914!5.27e-12!25;UBERON:0001869!1.39e-11!32;UBERON:0000025!2.05e-11!194;UBERON:0000955!7.61e-11!69;UBERON:0006238!7.61e-11!69;UBERON:0001017!1.41e-10!82;UBERON:0003915!3.61e-10!9;UBERON:0004700!3.61e-10!9;UBERON:0001917!3.61e-10!9;UBERON:0004111!1.66e-09!241;UBERON:0000468!2.53e-09!659;UBERON:0000119!9.10e-09!312;UBERON:0000483!1.28e-08!309;UBERON:0000055!2.51e-08!69;UBERON:0000467!2.58e-08!625;UBERON:0000480!3.05e-08!626;UBERON:0002308!3.34e-08!9;UBERON:0000125!3.34e-08!9;UBERON:0002049!4.22e-08!79;UBERON:0007798!4.22e-08!79;UBERON:0000922!9.02e-08!612;UBERON:0007023!1.06e-07!115;UBERON:0000477!1.20e-07!286;UBERON:0000956!1.44e-07!25;UBERON:0000203!1.44e-07!25;UBERON:0000033!1.45e-07!123;UBERON:0002298!2.30e-07!8;UBERON:0000153!3.14e-07!129;UBERON:0007811!3.14e-07!129;UBERON:0004121!5.96e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.80e-49;18!UBERON:0001986;2.80e-49;18!UBERON:0004852;2.80e-49;18!UBERON:0000487;1.14e-39;22!UBERON:0006914;1.77e-34;25!UBERON:0000490;1.00e-22;33!UBERON:0003915;3.00e-22;9!UBERON:0004700;3.00e-22;9!UBERON:0001917;3.00e-22;9!UBERON:0010523;3.38e-14;3!UBERON:0001915;3.38e-14;3!UBERON:0001982;3.38e-14;3!UBERON:0000055;2.85e-12;65!UBERON:0001638;4.58e-11;9!UBERON:0003920;4.58e-11;9!UBERON:0004582;4.58e-11;9!UBERON:0007500;2.25e-10;56!UBERON:0001981;2.25e-10;56!UBERON:0004537;2.25e-10;56!UBERON:0005800;8.18e-10;2!UBERON:0001515;8.18e-10;2!UBERON:0000473;2.51e-09;8!UBERON:0003914;1.81e-08;74!UBERON:0002049;4.80e-08;75!UBERON:0007798;4.80e-08;75!UBERON:0002066;6.38e-08;5!UBERON:0003135;9.00e-07;11!UBERON:0000947;9.38e-07;21!UBERON:0010191;9.38e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.75e-50,18;UBERON:0001986,7.75e-50,18;UBERON:0004852,7.75e-50,18;UBERON:0000487,4.04e-40,22;UBERON:0006914,7.14e-35,25;UBERON:0003915,1.59e-22,9;UBERON:0004700,1.59e-22,9;UBERON:0001917,1.59e-22,9;UBERON:0000055,7.61e-20,68;UBERON:0002049,1.11e-16,78;UBERON:0007798,1.11e-16,78;UBERON:0007500,1.24e-16,59;UBERON:0001981,1.24e-16,59;UBERON:0004537,1.24e-16,59;UBERON:0006965,1.24e-16,59;UBERON:0010523,3.26e-14,3;UBERON:0001915,3.26e-14,3;UBERON:0001982,3.26e-14,3;UBERON:0001638,3.20e-11,9;UBERON:0003920,3.20e-11,9;UBERON:0004582,3.20e-11,9;UBERON:0004872,1.11e-10,83;UBERON:0004535,1.34e-10,109;UBERON:0001009,3.41e-10,112;UBERON:0005800,6.47e-10,2;UBERON:0001515,6.47e-10,2;UBERON:0000473,2.52e-09,8;UBERON:0002066,6.47e-08,5;UBERON:0003914,1.76e-07,117;UBERON:0003081,6.10e-07,203;UBERON:0000947,7.53e-07,21;UBERON:0010191,7.53e-07,21;UBERON:0003135,9.02e-07,11;UBERON:0000025,9.87e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,1.43117993565528,0,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,3.28934310417461,2.47765096716083,0,0.512321413058201,0.236482229888585,0,0,0,0,0.818718450173537,1.34834090667051,0.306083892370903,1.28371610830437,0.639337125799041,0,0,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0,0,1.47311054395026,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.43917392846563,0.130979075497713,0,0,0,0,0.398873881556595,0,1.14398982156026,0,2.38514888840046,1.72046919021225,2.42998351125316,2.82653970962005,0,1.37559020970034,0.626984899610432,0.775250277507987,0.35576626268671,1.33888245105868,5.63961043952806,3.80136052859256,4.88124115096339,2.94130464276695,3.24056779152704,1.51809538082936,1.34717623575702,2.36484109014977,1.53316637465883,0,1.64881569537367,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0,0.404132016209064,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0.265059536642971,0.232387885739037,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,2.16549671641611,0.462985512576611,1.71228737011138,0,0,1.47730203652438,2.10603838625314,2.82399208348584,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.579125226670317,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0.343143423810856,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0.680374821106063,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0,1.62689197332152,0,0,0,0,0,0,0,0,0.460511024178389,0.413509717453592,0.107420244868274,0.145016693914229,0.170453254832202,1.95870478422822,0,0,0,0,0,0,0,0,0,0,1.48259375283136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,2.14245036494787,0,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,1.1713222286267,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.273810757783986,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,1.05786081394152,0,0,0.106787412567695,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,1.14681839138014,0.221858103073705,1.05563885000352,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40016658797892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0.127894371303652,0.323474434190045,0,0.54604819096007,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.319267718114302,0.41023272848151,0.252071696221718,0.207471757392654,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.337687923091973,0,0,0.507326481551255,0.546974809018219,0,0,0,0,0,0,0,0,0,0,2.57232014156128,0.815636795721981,0.591954962065642,0.118193840883968,0,0.078493092850514,0.628462359664008,0,0,0,0,1.35805433935647,0,0,0.173858272302579,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.981542335574726,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0.218531143927391,0,47.1188393407956,81.2340912007304,15.3464482223191,8.022641257356,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,2.44137706989443,0,0,0 | |||
|short_description=p9@BCAT1 | |||
}} |
Latest revision as of 21:57, 17 September 2015
Short description: | p9@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_BCAT1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 110bp_to_ENST00000538118_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | Q68DQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.29e-53 | 24 |
blood vessel endothelial cell | 7.75e-50 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.75e-50 | 18 |
endothelial cell | 1.17e-37 | 36 |
meso-epithelial cell | 3.49e-29 | 45 |
aortic endothelial cell | 1.18e-25 | 6 |
endothelial cell of artery | 1.59e-22 | 9 |
lining cell | 1.35e-21 | 58 |
barrier cell | 1.35e-21 | 58 |
vein endothelial cell | 5.89e-17 | 6 |
capillary endothelial cell | 3.26e-14 | 3 |
endothelial cell of umbilical vein | 6.84e-13 | 3 |
squamous epithelial cell | 1.02e-11 | 63 |
germ line cell | 1.17e-10 | 7 |
germ cell | 1.17e-10 | 7 |
mesodermal cell | 3.05e-10 | 121 |
thoracic aorta endothelial cell | 6.47e-10 | 2 |
macrophage | 7.31e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 7.75e-50 | 18 |
endothelium | 7.75e-50 | 18 |
cardiovascular system endothelium | 7.75e-50 | 18 |
simple squamous epithelium | 4.04e-40 | 22 |
squamous epithelium | 7.14e-35 | 25 |
endothelial tube | 1.59e-22 | 9 |
arterial system endothelium | 1.59e-22 | 9 |
endothelium of artery | 1.59e-22 | 9 |
vessel | 7.61e-20 | 68 |
vasculature | 1.11e-16 | 78 |
vascular system | 1.11e-16 | 78 |
epithelial tube open at both ends | 1.24e-16 | 59 |
blood vessel | 1.24e-16 | 59 |
blood vasculature | 1.24e-16 | 59 |
vascular cord | 1.24e-16 | 59 |
microcirculatory vessel | 3.26e-14 | 3 |
endothelium of capillary | 3.26e-14 | 3 |
capillary | 3.26e-14 | 3 |
vein | 3.20e-11 | 9 |
venous blood vessel | 3.20e-11 | 9 |
venous system | 3.20e-11 | 9 |
splanchnic layer of lateral plate mesoderm | 1.11e-10 | 83 |
cardiovascular system | 1.34e-10 | 109 |
circulatory system | 3.41e-10 | 112 |
segment of aorta | 6.47e-10 | 2 |
thoracic aorta | 6.47e-10 | 2 |
testis | 2.52e-09 | 8 |
umbilical vein | 6.47e-08 | 5 |
epithelial tube | 1.76e-07 | 117 |
lateral plate mesoderm | 6.10e-07 | 203 |
aorta | 7.53e-07 | 21 |
aortic system | 7.53e-07 | 21 |
male reproductive organ | 9.02e-07 | 11 |
tube | 9.87e-07 | 192 |