FFCP PHASE1:Hg19::chr15:50411412..50411437,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79895 | |EntrezGene=79895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13536 | |HGNC=13536 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TF62 | |UniProt=Q8TF62 | ||
|association_with_transcript=0bp_to_ENST00000284509,ENST00000557955,ENST00000558906,NM_024837,uc001zxu.2,uc010ufd.1,uc010ufe.1_5end | |association_with_transcript=0bp_to_ENST00000284509,ENST00000557955,ENST00000558906,NM_024837,uc001zxu.2,uc010ufd.1,uc010ufe.1_5end | ||
|cluster_id=chr15:50411412..50411437,- | |||
|coexpression_cluster_id=C3495 | |||
|description=CAGE_peak_1_at_ATP8B4_5end | |description=CAGE_peak_1_at_ATP8B4_5end | ||
|id=chr15:50411412..50411437,- | |id=chr15:50411412..50411437,- | ||
|ontology_enrichment_celltype=CL:0000037!4.45e-38!172;CL:0000566!4.45e-38!172;CL:0000988!4.95e-38!182;CL:0000763!5.87e-38!112;CL:0000049!5.87e-38!112;CL:0002032!9.08e-34!165;CL:0000837!9.08e-34!165;CL:0000738!1.99e-20!140;CL:0000766!1.96e-16!76;CL:0000557!4.06e-13!71;CL:0002031!8.43e-13!124;CL:0000839!3.11e-12!70;CL:0000094!1.33e-09!8;CL:0002087!3.59e-09!119;CL:0002009!5.38e-09!65;CL:0000081!2.36e-08!11;CL:0000080!7.88e-08!6;CL:0002194!8.32e-08!63;CL:0000576!8.32e-08!63;CL:0000040!8.32e-08!63;CL:0000559!8.32e-08!63;CL:0000134!1.21e-07!358;CL:0002274!2.67e-07!5;CL:0000457!2.67e-07!5;CL:0002191!2.67e-07!5;CL:0000097!2.67e-07!5;CL:0000831!2.67e-07!5;CL:0002028!2.67e-07!5;CL:0002320!4.97e-07!365 | |ontology_enrichment_celltype=CL:0000037!4.45e-38!172;CL:0000566!4.45e-38!172;CL:0000988!4.95e-38!182;CL:0000763!5.87e-38!112;CL:0000049!5.87e-38!112;CL:0002032!9.08e-34!165;CL:0000837!9.08e-34!165;CL:0000738!1.99e-20!140;CL:0000766!1.96e-16!76;CL:0000557!4.06e-13!71;CL:0002031!8.43e-13!124;CL:0000839!3.11e-12!70;CL:0000094!1.33e-09!8;CL:0002087!3.59e-09!119;CL:0002009!5.38e-09!65;CL:0000081!2.36e-08!11;CL:0000080!7.88e-08!6;CL:0002194!8.32e-08!63;CL:0000576!8.32e-08!63;CL:0000040!8.32e-08!63;CL:0000559!8.32e-08!63;CL:0000134!1.21e-07!358;CL:0002274!2.67e-07!5;CL:0000457!2.67e-07!5;CL:0002191!2.67e-07!5;CL:0000097!2.67e-07!5;CL:0000831!2.67e-07!5;CL:0002028!2.67e-07!5;CL:0002320!4.97e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.96e-17;8!CL:0000081;1.08e-15;11!CL:0000097;8.69e-13;5!CL:0000767;6.77e-08;3!CL:0000763;6.96e-08;100!CL:0000623;1.62e-07;3!CL:0000775;2.75e-07;3!CL:0000163;7.04e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.91e-31,177;CL:0000037,3.79e-29,168;CL:0000763,4.55e-27,108;CL:0000049,4.55e-27,108;CL:0002032,2.05e-24,161;CL:0000837,2.05e-24,161;CL:0000094,2.90e-17,8;CL:0000081,1.06e-15,11;CL:0000097,8.92e-13,5;CL:0002028,8.92e-13,5;CL:0000738,6.92e-11,136;CL:0000767,6.85e-08,3;CL:0000623,1.58e-07,3;CL:0000825,1.58e-07,3;CL:0000775,2.73e-07,3;CL:0000163,7.14e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000049;6.05e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!1.28e-19!31;DOID:1240!2.41e-18!39;DOID:2531!6.18e-13!51;DOID:0060083!6.18e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.15e-24;31!DOID:1240;4.79e-22;39!DOID:2531;4.88e-14;51!DOID:0060083;4.88e-14;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,6.28e-27,39;DOID:8692,1.73e-26,31;DOID:2531,5.06e-21,51;DOID:0060083,5.06e-21,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.44e-23!102;UBERON:0003061!9.44e-23!102;UBERON:0002193!6.64e-20!112;UBERON:0000178!2.90e-14!15;UBERON:0000179!2.90e-14!15;UBERON:0000463!2.90e-14!15;UBERON:0002371!2.71e-11!80;UBERON:0001474!1.05e-09!86;UBERON:0002405!4.00e-08!115;UBERON:0007023!2.20e-07!115;UBERON:0004765!3.16e-07!101;UBERON:0001434!3.16e-07!101;UBERON:0002384!3.17e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.76e-23;15!UBERON:0000179;1.76e-23;15!UBERON:0000463;1.76e-23;15!UBERON:0002390;1.15e-14;32!UBERON:0002193;6.55e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.71e-23,15;UBERON:0000179,1.71e-23,15;UBERON:0000463,1.71e-23,15;UBERON:0002390,3.84e-13,98;UBERON:0003061,3.84e-13,98;UBERON:0002193,3.21e-11,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.4169846681707,8.82807615623589,3.71558695958582,0,0,0,0,0,68.1153019256846,0,0.200544447470142,0.434021741431704,0,0.647787332037959,0,0.145398238779565,0,0,0.697287110717054,0,1.54853185447552,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.674170453335254,0.918251677112708,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0.56738522469114,0,1.7587406567972,0,1.3031330682307,0,0.368277635987565,0.316462387440884,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,84.5896502905765,79.0317073803966,36.0836196141856,0,0,0,0.167186495390678,0,0,0,29.9694129021117,0,0,0,6.02029202710673,16.5175371401045,20.8836138846669,17.9627511560801,13.9105481152825,0,0,0,22.6618685395132,0,0,0,0.318565414324097,0,0.950452044448374,0.903450714466637,0.255973222308837,1.24930726552346,0,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0.132957960518865,0.238490624305342,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600952235626387,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,0.891786973732369,0,0,0,0,0,0,332.055022341866,45.4329919508246,16.378921127721,16.7179145963675,8.07951573928832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,19.8390704868543,6.30498432646167,3.88129634747131,8.34229735818364,0,0,0,0,0,2.24702107184155,2.99161459204025,8.70272578215674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,5.60856922128404,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16593765627276,1.8300481571743,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,10.6563997938756,9.1756464857085,6.83576624608995,3.81170840732462,3.29089818468955,5.18778648954174,4.32025149790492,1.58625035258854,0,0,0,0,0,0,0,37.7205012008023,91.1565561830066,25.4008299268659,0.324621940274555,101.648578477072,1.82587743226554,13.631150932253,117.798204232332,42.661528006004,38.5411380248879,28.4537587139377,40.0295463428907,27.8239329252169,7.68101910771145,5.5919026973104,6.50711652676443,18.3664809677918,0.556812347790485,0,1.08182271390393,6.99451132795422,0,0,0.293016358543788,0,6.6866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,7.8489263673873,0,0,0,0,0.31900115973192,0,0.533034776018635,0,44.582392816187,0.498635045700469,0,0,0,0,1.43042921082341,0.421996129056054,0,0,0,0.995261931078505,0.176915129006678,0,67.9033384678624,45.3479655933665,36.6521042764148,0.337005664903385,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,1.22429104652196,1.0741718536843,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0.19351266257817,0.0730893170861856,0,0.193978032976839,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,140.52124687367,0,4.99485973130698,0.837847203816763,0.229160424011684,0,0,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,83.0153659825037,3.86900977278975,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0.653174720218818,0,0.903017728242729,0.340776043570843,0,0,0,0,0,0,0,0.320362237703084,1.57204305099666,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55888247071511,0.398594520940089,0.981392365535065,0,0,0,34.5978194829029,42.4633084182681,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.354809480650555,0.115233987555779,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0.357382720883282,0,12.5540739397575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.308696632431779,0.874238242015829,0,0,0,0,0.297046400327086,0,0,0.563903507879121,1.35361564744512,0,0,0,0,0,0,0.286679166302903,0,0,0,1.5870805215462,0,0,0,0,0,0.760191006068622,0,0,0,0,0.151557396436479,0,0,0.103432995861895,1.27940389140589,0,0.129177819672012,0.496597714366863,0,0,0,0.217716747896961,0,0.606168477131288,0.78894425931944,0,0,0,0,0,0,5.86758932077759,0.813792356631477,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.4169846681707,8.82807615623589,3.71558695958582,0,0,0,0,0,68.1153019256846,0,0.200544447470142,0.434021741431704,0,0.647787332037959,0,0.145398238779565,0,0,0.697287110717054,0,1.54853185447552,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.674170453335254,0.918251677112708,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0.56738522469114,0,1.7587406567972,0,1.3031330682307,0,0.368277635987565,0.316462387440884,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,84.5896502905765,79.0317073803966,36.0836196141856,0,0,0,0.167186495390678,0,0,0,29.9694129021117,0,0,0,6.02029202710673,16.5175371401045,20.8836138846669,17.9627511560801,13.9105481152825,0,0,0,22.6618685395132,0,0,0,0.318565414324097,0,0.950452044448374,0.903450714466637,0.255973222308837,1.24930726552346,0,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0.132957960518865,0.238490624305342,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600952235626387,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,0.891786973732369,0,0,0,0,0,0,332.055022341866,45.4329919508246,16.378921127721,16.7179145963675,8.07951573928832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,19.8390704868543,6.30498432646167,3.88129634747131,8.34229735818364,0,0,0,0,0,2.24702107184155,2.99161459204025,8.70272578215674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,5.60856922128404,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16593765627276,1.8300481571743,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,10.6563997938756,9.1756464857085,6.83576624608995,3.81170840732462,3.29089818468955,5.18778648954174,4.32025149790492,1.58625035258854,0,0,0,0,0,0,0,37.7205012008023,91.1565561830066,25.4008299268659,0.324621940274555,101.648578477072,1.82587743226554,13.631150932253,117.798204232332,42.661528006004,38.5411380248879,28.4537587139377,40.0295463428907,27.8239329252169,7.68101910771145,5.5919026973104,6.50711652676443,18.3664809677918,0.556812347790485,0,1.08182271390393,6.99451132795422,0,0,0.293016358543788,0,6.6866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,7.8489263673873,0,0,0,0,0.31900115973192,0,0.533034776018635,0,44.582392816187,0.498635045700469,0,0,0,0,1.43042921082341,0.421996129056054,0,0,0,0.995261931078505,0.176915129006678,0,67.9033384678624,45.3479655933665,36.6521042764148,0.337005664903385,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,1.22429104652196,1.0741718536843,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0.19351266257817,0.0730893170861856,0,0.193978032976839,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,140.52124687367,0,4.99485973130698,0.837847203816763,0.229160424011684,0,0,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,83.0153659825037,3.86900977278975,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0.653174720218818,0,0.903017728242729,0.340776043570843,0,0,0,0,0,0,0,0.320362237703084,1.57204305099666,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55888247071511,0.398594520940089,0.981392365535065,0,0,0,34.5978194829029,42.4633084182681,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.354809480650555,0.115233987555779,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0.357382720883282,0,12.5540739397575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.308696632431779,0.874238242015829,0,0,0,0,0.297046400327086,0,0,0.563903507879121,1.35361564744512,0,0,0,0,0,0,0.286679166302903,0,0,0,1.5870805215462,0,0,0,0,0,0.760191006068622,0,0,0,0,0.151557396436479,0,0,0.103432995861895,1.27940389140589,0,0.129177819672012,0.496597714366863,0,0,0,0.217716747896961,0,0.606168477131288,0.78894425931944,0,0,0,0,0,0,5.86758932077759,0.813792356631477,0,0.201273793591026,0 | ||
|short_description=p1@ATP8B4 | |short_description=p1@ATP8B4 | ||
}} | }} |
Latest revision as of 23:07, 17 September 2015
Short description: | p1@ATP8B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP8B4_5end |
Coexpression cluster: | C3495_Mast_granulocyte_acute_CD34_immature_CD133_cord |
Association with transcript: | 0bp_to_ENST00000284509, ENST00000557955, ENST00000558906, NM_024837, uc001zxu.2, uc010ufd.1, uc010ufe.1_5end |
EntrezGene: | ATP8B4 |
HGNC: | 13536 |
UniProt: | Q8TF62 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.91e-31 | 177 |
hematopoietic stem cell | 3.79e-29 | 168 |
myeloid cell | 4.55e-27 | 108 |
common myeloid progenitor | 4.55e-27 | 108 |
hematopoietic oligopotent progenitor cell | 2.05e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-24 | 161 |
granulocyte | 2.90e-17 | 8 |
blood cell | 1.06e-15 | 11 |
mast cell | 8.92e-13 | 5 |
basophil mast progenitor cell | 8.92e-13 | 5 |
leukocyte | 6.92e-11 | 136 |
basophil | 6.85e-08 | 3 |
natural killer cell | 1.58e-07 | 3 |
pro-NK cell | 1.58e-07 | 3 |
neutrophil | 2.73e-07 | 3 |
endocrine cell | 7.14e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood | 1.71e-23 | 15 |
haemolymphatic fluid | 1.71e-23 | 15 |
organism substance | 1.71e-23 | 15 |
hematopoietic system | 3.84e-13 | 98 |
blood island | 3.84e-13 | 98 |
hemolymphoid system | 3.21e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
leukemia | 6.28e-27 | 39 |
myeloid leukemia | 1.73e-26 | 31 |
hematologic cancer | 5.06e-21 | 51 |
immune system cancer | 5.06e-21 | 51 |