FFCP PHASE1:Hg19::chr17:76851179..76851237,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7077 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11821 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-309bp_to_AL110197_5end | |||
|cluster_id=chr17:76851179..76851237,- | |||
|coexpression_cluster_id=C1793 | |||
|description=CAGE_peak_2_at_TIMP2_5end | |||
|id=chr17:76851179..76851237,- | |||
|ontology_enrichment_celltype=CL:0000055!1.37e-20!180;CL:0000057!8.06e-14!75;CL:0000222!7.35e-11!119;CL:0000183!4.31e-08!59;CL:0000192!4.96e-07!42;CL:0000514!4.96e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002334;7.90e-07;12!CL:0000134;9.09e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.09e-13,76;CL:0000222,3.25e-08,121;CL:0000192,3.97e-07,43;CL:0000514,3.97e-07,43;CL:0002334,5.66e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.62e-14!659;UBERON:0000467!1.71e-12!625;UBERON:0000480!3.19e-12!626;UBERON:0004872!2.50e-09!84;UBERON:0005256!7.68e-09!143;UBERON:0000475!1.87e-08!365;UBERON:0002049!2.48e-08!79;UBERON:0007798!2.48e-08!79;UBERON:0003914!4.08e-08!118;UBERON:0000923!6.02e-08!604;UBERON:0005291!6.02e-08!604;UBERON:0006598!6.02e-08!604;UBERON:0002532!6.02e-08!604;UBERON:0002050!6.11e-08!605;UBERON:0005423!6.11e-08!605;UBERON:0000477!6.66e-08!286;UBERON:0000055!7.82e-08!69;UBERON:0000926!1.21e-07!448;UBERON:0004120!1.21e-07!448;UBERON:0006603!1.21e-07!448;UBERON:0001981!1.76e-07!60;UBERON:0007500!1.76e-07!60;UBERON:0004537!1.76e-07!60;UBERON:0006965!1.76e-07!60;UBERON:0000922!1.88e-07!612;UBERON:0004111!3.04e-07!241;UBERON:0000062!3.27e-07!511;UBERON:0004290!4.15e-07!70;UBERON:0000914!4.21e-07!83;UBERON:0002329!4.21e-07!83;UBERON:0003077!4.21e-07!83;UBERON:0003059!4.21e-07!83;UBERON:0007282!4.21e-07!83;UBERON:0009618!4.21e-07!83;UBERON:0007285!4.21e-07!83;UBERON:0002100!4.93e-07!216;UBERON:0000119!7.30e-07!312;UBERON:0000483!8.17e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.55e-07;9!UBERON:0000042;6.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.45e-09,315;UBERON:0004120,1.45e-09,315;UBERON:0006603,1.45e-09,315;UBERON:0005256,1.35e-07,122;UBERON:0004872,3.16e-07,83;UBERON:0004923,5.27e-07,66;UBERON:0002199,7.23e-07,46;UBERON:0002416,7.23e-07,46;UBERON:0007503,8.21e-07,78 | |||
|phase1_expression=12.5358081696684,15.6293382440418,17.7602549160924,14.0102617694383,17.4314826826642,13.0850778615055,20.2639902534648,27.7956744307806,24.5514490507848,0.737201809504527,0.697801167972428,1.31064823278103,1.58260186937072,3.34169152992126,0.994192127183747,2.01697543935533,3.61616716814386,2.19093027116212,1.46379839637152,1.96993692922861,3.26401105990805,1.56727360739044,0.572471974262113,0.821246550437305,1.00434111675842,0,0,0,0,0.767658796194425,0.309632246632152,0,0,0.369754010166788,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,4.70222495903841,2.91504299417082,4.12120908214698,2.90796477559129,1.88937971844405,1.21292030593908,0.232429036905685,0.411167888021826,0.929119112685311,0.863077176966451,1.0246428261164,0,2.41321976515633,0.645484683583826,1.35426486594342,2.25890807451126,3.0019676506363,1.57306439111559,2.14258724659632,2.24650318953266,2.55734850319616,0.659702600373432,1.19678194572979,1.27867425159808,0,0,1.24564449799115,1.25624332628372,0,0.217188844705117,1.21079900526674,0.368277635987565,0.949387162322653,0.845021145247767,0.212604299965044,0.419317291016752,0.898629049171961,1.05123824989054,1.28580469357664,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,1.34140171940727,0.767175371061182,2.53007406669196,3.00802746381534,4.77993512570718,1.5905718941022,2.91980922181582,0.661743720148475,1.33037638477538,0.527008714158756,2.0956652079634,0,0,0,0.696518949197069,2.12732736830184,0,0,0,0.596287222100115,1.72046919021225,0,1.13061588384802,2.93649605346934,0.275118041940067,0.835979866147242,1.03366703667732,1.42306505074684,1.67360306382335,2.81980521976403,2.28081631715554,6.83373761134875,0.735326160691737,0.81014194788176,0.982297011124877,0.673588117878509,0.450445921933289,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,3.97577561356255,6.20489507156441,0.926864265692532,20.6522366939146,2.83734705758686,1.68203280042692,3.20246987189115,5.42668606517752,2.17847724779836,2.2900814251847,1.9615428373615,4.69208025699287,0.576175924479999,0.937285727335186,6.86752169026705,1.71141546463335,7.02408798593465,0.939475989150119,1.13311061057692,0.561803226808994,1.02077085627447,1.96534907698829,3.71972812232756,19.0080457165129,15.083282685992,5.46096817162816,7.18618141816238,1.0100166837244,1.25118519871964,2.49357703935765,1.31693286264251,3.67785354958824,9.6152357700222,0.794025282120147,2.33206526395521,5.76604949810132,3.17897851739343,3.60109315301283,4.32820622801443,2.31876486041066,5.21127197728451,3.20675031258406,6.52827934580031,0.757301322732344,4.23429533754577,9.5371173523099,6.03516307278244,5.03760491138201,2.88253006927829,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.518305275076852,0,0,4.69348596989448,6.43240938192885,1.38134921352481,6.96551892047969,5.0531563716871,0.709840800239063,0.505754070234305,0.482022059766964,0.55146986366197,0.217879444092406,0.474541238222193,0.269662616320329,0.588664395376038,0,11.8104872739944,5.60967095213783,1.6462960453256,2.94017422771084,0,0,5.31710916013264,0,1.22988438543114,0.686271241194102,0.109750285408626,0,0.100528972411631,0,2.6064664424826,1.03993478527958,0,0.463721619900307,0,2.45422961193825,0.925971025153221,2.47330397904978,0,0,1.96973604869918,0.936017060556951,1.0404181360211,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0.829312462163088,1.58531948758658,0.6312121671319,3.93686944611448,20.2453865545887,24.6156639141099,15.3965201420435,7.19792448923265,7.20823338825402,10.2897515747008,2.46688385559794,0.43596006883328,1.1734125731352,2.97324946242889,0,1.690605505112,19.1475443941107,10.4007436911366,0.514414748524284,0,1.3321108950805,2.57360388584666,1.62786481617433,2.46972101034231,0.65147236858747,2.13235169245527,0,5.12446941001296,1.74306691720059,10.3971910829339,3.64871341923571,2.00902836572851,4.21667878966063,1.91699884393266,6.89171615004683,0,1.73737568001095,1.64381058040307,0.179060963239896,0,0,0,0,8.38512259934129,2.60279707715243,0,0.670065061337395,2.55175500661265,2.99602809578873,14.9580729602012,3.72973962092432,3.55805325985506,2.00068208423871,1.35632511849868,5.61521326133179,6.78030157429215,5.20417969611984,1.63997980989798,8.12554469264841,45.481500811197,30.0071906748264,0.664225598535437,0.737476674166813,11.9899387965954,14.4892856522428,5.49029478097369,0.206768026122887,0.215714200818617,0.640365346820666,1.81876542867756,0,1.5119514666484,21.8334870880524,1.99500565274481,8.70046292742528,24.2182992093275,19.9565827136014,14.4768529029247,10.3892646511494,2.31314540703983,4.08391968220192,3.12083192852475,8.82732529612156,2.90525946149898,2.53804844142407,1.80455823272956,0.276242966807689,2.06666006696292,4.00600569614778,11.6700729313887,0.451199612907412,1.00119938235739,1.56869953835371,0,0.844413031143006,2.27466768141793,2.72149928442425,0.647747748306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| |||
|short_description=p2@TIMP2 | |||
}} |
Latest revision as of 23:14, 17 September 2015
Short description: | p2@TIMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TIMP2_5end |
Coexpression cluster: | C1793_Osteoblast_Melanocyte_Preadipocyte_Adipocyte_Mesenchymal_Fibroblast_chorionic |
Association with transcript: | -309bp_to_AL110197_5end |
EntrezGene: | TIMP2 |
HGNC: | 11821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.09e-13 | 76 |
mesodermal cell | 3.25e-08 | 121 |
smooth muscle cell | 3.97e-07 | 43 |
smooth muscle myoblast | 3.97e-07 | 43 |
preadipocyte | 5.66e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.45e-09 | 315 |
mesoderm-derived structure | 1.45e-09 | 315 |
presumptive mesoderm | 1.45e-09 | 315 |
trunk mesenchyme | 1.35e-07 | 122 |
splanchnic layer of lateral plate mesoderm | 3.16e-07 | 83 |
organ component layer | 5.27e-07 | 66 |
integument | 7.23e-07 | 46 |
integumental system | 7.23e-07 | 46 |
epithelial vesicle | 8.21e-07 | 78 |