FFCP PHASE1:Hg19::chr11:44117206..44117218,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:44117206..44117218,+ to FFCP PHASE1:Hg19::chr11:44117206..44117218,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2132 | |EntrezGene=2132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3513 | |HGNC=3513 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJA5 | |UniProt=E9PJA5 | ||
|association_with_transcript=-4bp_to_ENST00000532479_5end | |||
|cluster_id=chr11:44117206..44117218,+ | |||
|coexpression_cluster_id=C2131 | |||
|description=CAGE_peak_2_at_EXT2_5end | |||
|id=chr11:44117206..44117218,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.90e-29!180;CL:0000680!2.58e-15!57;CL:0000056!2.58e-15!57;CL:0000355!2.58e-15!57;CL:0000057!3.87e-15!75;CL:0000220!9.37e-15!246;CL:0000222!1.27e-14!119;CL:0000183!2.18e-14!59;CL:0002321!2.22e-14!248;CL:0000187!2.74e-14!54;CL:0000192!1.45e-13!42;CL:0000514!1.45e-13!42;CL:0000393!3.41e-12!60;CL:0000211!3.41e-12!60;CL:0000359!3.71e-12!32;CL:0002371!1.39e-08!591;CL:0000144!2.74e-08!625;CL:0000548!4.10e-07!679;CL:0000004!4.10e-07!679;CL:0000255!4.10e-07!679;CL:0000012!7.62e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.84e-11;32!CL:0000192;6.82e-10;43!CL:0000134;4.89e-08;55!CL:0000187;8.18e-08;55!CL:0000723;2.45e-07;61!CL:0000048;3.97e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.25e-15,76;CL:0000680,2.07e-15,58;CL:0000056,2.07e-15,58;CL:0000355,2.07e-15,58;CL:0000222,5.88e-15,121;CL:0002321,1.05e-14,250;CL:0000187,2.20e-14,55;CL:0000192,1.22e-13,43;CL:0000514,1.22e-13,43;CL:0000393,2.65e-12,61;CL:0000211,2.65e-12,61;CL:0000359,3.70e-12,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.82e-10;43!CL:0000355;8.61e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.59e-16!82;UBERON:0000914!9.42e-16!83;UBERON:0002329!9.42e-16!83;UBERON:0003077!9.42e-16!83;UBERON:0003059!9.42e-16!83;UBERON:0007282!9.42e-16!83;UBERON:0009618!9.42e-16!83;UBERON:0007285!9.42e-16!83;UBERON:0000475!1.58e-14!365;UBERON:0005256!2.28e-14!143;UBERON:0004290!3.36e-14!70;UBERON:0001134!9.04e-14!61;UBERON:0002036!9.04e-14!61;UBERON:0003082!9.04e-14!61;UBERON:0002049!1.25e-13!79;UBERON:0007798!1.25e-13!79;UBERON:0002385!2.69e-13!63;UBERON:0001015!2.69e-13!63;UBERON:0000383!2.69e-13!63;UBERON:0000119!4.06e-12!312;UBERON:0000055!4.45e-12!69;UBERON:0000483!4.79e-12!309;UBERON:0001981!7.06e-12!60;UBERON:0007500!7.06e-12!60;UBERON:0004537!7.06e-12!60;UBERON:0006965!7.06e-12!60;UBERON:0004872!1.36e-10!84;UBERON:0001637!1.53e-10!42;UBERON:0003509!1.53e-10!42;UBERON:0004572!1.53e-10!42;UBERON:0002100!3.61e-10!216;UBERON:0000490!4.75e-10!138;UBERON:0003914!1.40e-09!118;UBERON:0003102!1.93e-09!95;UBERON:0004573!2.66e-09!33;UBERON:0004571!2.66e-09!33;UBERON:0000481!7.24e-09!347;UBERON:0000468!1.19e-08!659;UBERON:0000467!2.78e-08!625;UBERON:0000480!5.08e-08!626;UBERON:0002199!6.70e-08!45;UBERON:0002416!6.70e-08!45;UBERON:0002097!3.89e-07!40;UBERON:0003104!3.98e-07!238;UBERON:0009142!3.98e-07!238;UBERON:0004535!9.12e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.61e-08;33!UBERON:0004571;1.61e-08;33!UBERON:0001637;3.21e-08;42!UBERON:0003509;3.21e-08;42!UBERON:0004572;3.21e-08;42!UBERON:0007500;5.99e-07;56!UBERON:0001981;5.99e-07;56!UBERON:0004537;5.99e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.21e-16,83;UBERON:0007524,2.04e-14,73;UBERON:0002329,2.59e-14,71;UBERON:0003059,2.59e-14,71;UBERON:0007282,2.59e-14,71;UBERON:0004290,2.59e-14,71;UBERON:0009618,2.59e-14,71;UBERON:0003077,5.19e-14,72;UBERON:0007285,5.19e-14,72;UBERON:0007503,5.84e-14,78;UBERON:0001134,7.08e-14,62;UBERON:0002036,7.08e-14,62;UBERON:0003082,7.08e-14,62;UBERON:0002385,2.09e-13,64;UBERON:0001015,2.09e-13,64;UBERON:0000383,2.09e-13,64;UBERON:0002049,3.61e-13,78;UBERON:0007798,3.61e-13,78;UBERON:0003104,1.03e-12,160;UBERON:0009142,1.03e-12,160;UBERON:0000119,1.52e-12,309;UBERON:0000483,1.80e-12,306;UBERON:0000055,1.27e-11,68;UBERON:0007500,2.09e-11,59;UBERON:0001981,2.09e-11,59;UBERON:0004537,2.09e-11,59;UBERON:0006965,2.09e-11,59;UBERON:0005256,4.02e-11,122;UBERON:0000490,6.30e-11,148;UBERON:0001637,1.53e-10,42;UBERON:0003509,1.53e-10,42;UBERON:0004572,1.53e-10,42;UBERON:0003102,2.97e-10,99;UBERON:0004872,3.49e-10,83;UBERON:0003914,1.80e-09,117;UBERON:0004573,2.66e-09,33;UBERON:0004571,2.66e-09,33;UBERON:0002100,6.22e-09,199;UBERON:0002199,2.95e-08,46;UBERON:0002416,2.95e-08,46;UBERON:0002097,1.72e-07,41 | |||
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| ||
|short_description=p2@EXT2 | |||
}} | }} |
Latest revision as of 23:58, 17 September 2015
Short description: | p2@EXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EXT2_5end |
Coexpression cluster: | C2131_Smooth_Fibroblast_gall_leiomyoma_bone_Chondrocyte_mesenchymal |
Association with transcript: | -4bp_to_ENST00000532479_5end |
EntrezGene: | EXT2 |
HGNC: | 3513 |
UniProt: | E9PJA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.25e-15 | 76 |
muscle precursor cell | 2.07e-15 | 58 |
myoblast | 2.07e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.07e-15 | 58 |
mesodermal cell | 5.88e-15 | 121 |
embryonic cell | 1.05e-14 | 250 |
muscle cell | 2.20e-14 | 55 |
smooth muscle cell | 1.22e-13 | 43 |
smooth muscle myoblast | 1.22e-13 | 43 |
electrically responsive cell | 2.65e-12 | 61 |
electrically active cell | 2.65e-12 | 61 |
vascular associated smooth muscle cell | 3.70e-12 | 32 |