FFCP PHASE1:Hg19::chr1:40562908..40562931,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5538 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9325 | |||
|TSSclassifier=strong | |||
|UniProt=E9PMG2,E9PNU2,E9PIA8,E9PK48 | |||
|association_with_transcript=0bp_to_ENST00000372779,ENST00000449045,ENST00000527107,ENST00000527311,ENST00000529905,ENST00000530704_5end | |||
|cluster_id=chr1:40562908..40562931,- | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_1_at_PPT1_5end | |||
|id=chr1:40562908..40562931,- | |||
|ontology_enrichment_celltype=CL:0000766!8.60e-36!76;CL:0000763!2.12e-35!112;CL:0000049!2.12e-35!112;CL:0002009!1.33e-34!65;CL:0002194!1.84e-33!63;CL:0000576!1.84e-33!63;CL:0000040!1.84e-33!63;CL:0000559!1.84e-33!63;CL:0000557!8.50e-31!71;CL:0000839!1.01e-28!70;CL:0000860!7.20e-26!45;CL:0002057!4.19e-25!42;CL:0000037!2.04e-18!172;CL:0000566!2.04e-18!172;CL:0002032!6.76e-18!165;CL:0000837!6.76e-18!165;CL:0000988!4.81e-15!182;CL:0000738!5.13e-15!140;CL:0002087!3.65e-13!119;CL:0002031!1.66e-11!124 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.09e-18;48!CL:0000473;1.24e-18;39!CL:0000234;1.24e-18;39!CL:0000860;4.23e-18;33!CL:0002057;4.23e-18;33!CL:0000766;3.49e-15;69!CL:0000763;7.58e-12;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.59e-36,72;CL:0000763,5.05e-35,108;CL:0000049,5.05e-35,108;CL:0002009,1.05e-34,61;CL:0002194,1.44e-33,59;CL:0000576,1.44e-33,59;CL:0000040,1.44e-33,59;CL:0000559,1.44e-33,59;CL:0000557,1.07e-30,67;CL:0000473,3.36e-29,48;CL:0000234,3.36e-29,48;CL:0000839,1.38e-28,66;CL:0000860,4.19e-25,42;CL:0002057,4.19e-25,42;CL:0000037,7.02e-18,168;CL:0002032,2.29e-17,161;CL:0000837,2.29e-17,161;CL:0000988,9.48e-15,177;CL:0000738,1.61e-14,136;CL:0002087,1.09e-12,115;CL:0002031,4.85e-11,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.30e-18;42!CL:0000049;1.08e-10;108 | |||
|ontology_enrichment_disease=DOID:162!4.06e-12!235;DOID:14566!1.17e-11!239;DOID:305!1.23e-09!106;DOID:0050687!2.32e-08!143;DOID:1240!8.75e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.06e-12,235;DOID:14566,1.17e-11,239;DOID:305,1.23e-09,106;DOID:0050687,2.32e-08,143;DOID:1240,8.75e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.39e-29!102;UBERON:0003061!3.39e-29!102;UBERON:0002193!1.06e-27!112;UBERON:0002371!4.09e-25!80;UBERON:0001474!5.15e-25!86;UBERON:0002405!1.64e-18!115;UBERON:0004765!1.79e-18!101;UBERON:0001434!1.79e-18!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.25e-29,98;UBERON:0003061,8.25e-29,98;UBERON:0002193,2.95e-27,108;UBERON:0002371,8.28e-25,76;UBERON:0001474,1.15e-24,82;UBERON:0002405,2.05e-22,93;UBERON:0004765,7.99e-20,90;UBERON:0001434,7.48e-17,100 | |||
|phase1_expression=41.9677056114986,39.1803958720499,35.3795554280888,29.0212565224078,45.1430705371561,40.9999106327173,30.3959853801973,36.0080327853294,28.4692334737824,37.3515583482293,6.97801167972428,45.2173640309457,34.0259401914705,59.0365503619422,40.7618772145336,26.2206807116192,15.6700577286234,23.3699228923959,21.9569759455728,23.8854852668969,20.196068433181,20.6880116175538,70.700288821371,63.6466076588912,80.7239172594582,44.5490155510556,43.6775135873711,46.124517849816,241.525665985227,172.723229143746,210.549927709863,49.6487461218621,49.0965647608548,34.0173689353445,64.5301780833913,72.7906470335598,114.210570901256,302.481493058405,244.864770361043,156.030816044697,692.570561824086,451.831664096476,573.878364688968,277.710636068969,186.670716182272,239.91563651475,284.725570209464,189.548396378062,215.555634142992,340.627792509426,200.573833212286,302.697254257389,262.696208721303,172.989895200465,227.516497478494,306.45852877536,192.671741940839,256.634219236287,276.087670918554,201.222499976711,226.325342532861,305.112452672712,208.439522214605,230.161365287655,321.261627161843,184.967583249312,168.162007228805,304.262133625916,209.636133204921,299.069039158946,300.883552808784,195.555424709397,225.004757470469,425.679401918563,388.853264636065,408.205382804808,415.503606610885,443.172010775285,332.541238876259,224.305029324363,252.624180042844,274.178894800716,36.9592113368778,44.7833661234948,53.3705552318133,56.328389378779,43.6431625869254,28.1628695577697,50.9004552044344,50.5648489903743,27.891435486363,32.2980454154016,23.7009401437642,58.1553845747714,54.9298391721905,89.2872047387511,35.8011781607176,51.4844099201406,50.7835702528788,93.4572509233891,49.5401845283057,47.8182283792081,52.6032166701361,93.8076046973162,45.9585215660746,48.2943890192294,47.3906761588777,91.5852936038577,90.2611872065555,73.3393054532395,84.0104054068979,87.8103349777209,69.3981115598443,65.8150437100694,61.6759590449363,99.8255309165558,55.1837510786767,49.1387247040161,53.1341353240956,56.7046437496892,52.0866763085135,55.1262185780057,63.8438504889757,59.8977340202678,101.1938885074,71.0331756132051,55.8367037906312,41.5309891042949,36.371866626557,34.613032527989,117.027295830702,88.53251348088,69.1736459573499,36.8667935432258,35.0936537445123,38.3843275246183,82.7097384933143,54.0164706035926,62.7711185969411,55.6540787631036,59.7276542713257,74.5270939581985,13.1146303785315,17.7976532536526,1071.98004124142,1023.70872558239,1154.07509730375,60.5766185735569,62.9194401858141,31.2024301116835,83.6789735013828,77.4211135595512,71.5109433311644,88.1880389401455,66.700410357375,71.2555728624775,74.8201980201782,85.7943640442172,82.1820066806301,82.6759913528736,61.6328855176995,47.1368705545478,60.527390271946,76.8415837922866,57.5200782996049,115.285949214747,91.8325134041035,99.3233257862902,52.1276567384003,58.854470893224,74.0135045478845,312.31958932347,345.12443509201,22.6768907114118,28.3274012466332,65.3413440189232,36.9421614468881,124.773930025734,67.3869926176878,43.7328528111,34.1596786335056,51.0601825223521,55.7067753365582,51.7288980747602,77.4809420757794,38.8988589047474,55.3128887500799,22.4948574560445,44.9510510635662,59.3290694406227,47.3752317349209,45.5645854737808,57.3030223063186,56.1803226808994,83.2949018719964,44.46602286686,72.8446757289146,54.6481314349745,57.3659275926252,35.496293115583,22.9957805381196,59.4226482257854,50.5478820282735,56.2440154432891,45.6536725716071,65.2819005051912,48.076178850111,70.5548179255331,39.4657198515496,28.1895753240509,36.8761508017638,72.0218630602565,31.8432315346776,27.5675377848823,29.964813869386,70.7172832090906,33.4208927702911,30.0396191350496,31.0208158424549,25.2167848637347,47.2162758047097,26.1955455391865,57.6506013855658,45.9960830528646,41.184664209216,47.3227582391856,92.7000166584925,103.108159754116,96.2085846959612,75.6725701612204,74.1823301574347,76.2802680468485,50.0638503455411,60.4646481901312,53.8726193274674,28.3264436099507,28.1532997851138,119.134947640123,125.25842472803,128.217867898012,117.683668905464,120.923091471285,139.277853418214,130.92120022352,138.924797308745,136.200493559022,45.0274827321035,15.426595118379,30.4564768385236,16.1709582524096,22.8159062679296,34.3989525837169,41.9460833743797,49.8853302338555,49.5643407328748,67.4261494473205,29.303326204103,33.7205259772859,52.1745366816364,42.9610385535577,21.1775398451711,29.1181739878282,53.4025965493511,89.034551020859,42.14972123066,91.961427223804,107.412638917774,77.6236941117161,68.7477826224569,55.8016005361667,585.996474488006,839.607303319585,715.807677582515,45.9295786535207,27.2131047682152,35.8690996023238,35.7338505584365,43.5950907770943,53.6735750831296,119.224503570818,87.3440465411202,39.3923419527467,47.4154646741803,46.5834579343342,76.7689541992324,67.6119513238151,100.80700460064,53.0324582670386,105.089697542797,104.219041071839,82.3180125976065,38.5730930148041,60.5984495678259,71.2848138179634,49.6403388509867,10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| |||
|short_description=p1@PPT1 | |||
}} |
Latest revision as of 00:47, 18 September 2015
Short description: | p1@PPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPT1_5end |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | 0bp_to_ENST00000372779, ENST00000449045, ENST00000527107, ENST00000527311, ENST00000529905, ENST00000530704_5end |
EntrezGene: | PPT1 |
HGNC: | 9325 |
UniProt: | E9PMG2E9PNU2E9PIA8E9PK48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.59e-36 | 72 |
myeloid cell | 5.05e-35 | 108 |
common myeloid progenitor | 5.05e-35 | 108 |
macrophage dendritic cell progenitor | 1.05e-34 | 61 |
monopoietic cell | 1.44e-33 | 59 |
monocyte | 1.44e-33 | 59 |
monoblast | 1.44e-33 | 59 |
promonocyte | 1.44e-33 | 59 |
granulocyte monocyte progenitor cell | 1.07e-30 | 67 |
defensive cell | 3.36e-29 | 48 |
phagocyte | 3.36e-29 | 48 |
myeloid lineage restricted progenitor cell | 1.38e-28 | 66 |
classical monocyte | 4.19e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.19e-25 | 42 |
hematopoietic stem cell | 7.02e-18 | 168 |
hematopoietic oligopotent progenitor cell | 2.29e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.29e-17 | 161 |
hematopoietic cell | 9.48e-15 | 177 |
leukocyte | 1.61e-14 | 136 |
nongranular leukocyte | 1.09e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 4.85e-11 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.25e-29 | 98 |
blood island | 8.25e-29 | 98 |
hemolymphoid system | 2.95e-27 | 108 |
bone marrow | 8.28e-25 | 76 |
bone element | 1.15e-24 | 82 |
immune system | 2.05e-22 | 93 |
skeletal element | 7.99e-20 | 90 |
skeletal system | 7.48e-17 | 100 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.06e-12 | 235 |
disease of cellular proliferation | 1.17e-11 | 239 |
carcinoma | 1.23e-09 | 106 |
cell type cancer | 2.32e-08 | 143 |
leukemia | 8.75e-07 | 39 |