FFCP PHASE1:Hg19::chr5:44389509..44389536,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:44389509..44389536,- to FFCP PHASE1:Hg19::chr5:44389509..44389536,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2255 | |EntrezGene=2255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3666 | |HGNC=3666 | ||
|TSSclassifier=strong | |||
|UniProt=D6RG33 | |UniProt=D6RG33 | ||
|association_with_transcript=271bp_to_ENST00000513107_5end | |||
|cluster_id=chr5:44389509..44389536,- | |||
|description=CAGE_peak_1_at_FGF10_5end | |||
|id=chr5:44389509..44389536,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,2.23e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-37!115;UBERON:0004905!3.01e-07!5;UBERON:0000982!3.01e-07!5;UBERON:0004770!3.01e-07!5;UBERON:0005174!8.28e-07!5;UBERON:0001137!8.28e-07!5;UBERON:0000468!9.52e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;9.38e-14;8!UBERON:0000982;9.38e-14;8!UBERON:0004770;9.38e-14;8!UBERON:0011135;9.93e-12;5!UBERON:0002216;9.93e-12;5!UBERON:0011134;9.93e-12;5!UBERON:0002209;9.93e-12;5!UBERON:0002213;9.93e-12;5!UBERON:0007844;9.93e-12;5!UBERON:0011138;9.93e-12;5!UBERON:0001130;9.93e-12;5!UBERON:0001066;9.93e-12;5!UBERON:0001468;9.93e-12;5!UBERON:0002242;1.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.48e-16,114;UBERON:0004905,7.89e-14,8;UBERON:0000982,7.89e-14,8;UBERON:0004770,7.89e-14,8;UBERON:0011135,1.18e-11,5;UBERON:0002216,1.18e-11,5;UBERON:0011134,1.18e-11,5;UBERON:0002209,1.18e-11,5;UBERON:0002213,1.18e-11,5;UBERON:0005856,1.18e-11,5;UBERON:0005866,1.18e-11,5;UBERON:0005863,1.18e-11,5;UBERON:0007844,1.18e-11,5;UBERON:0011138,1.18e-11,5;UBERON:0001130,1.18e-11,5;UBERON:0001066,1.18e-11,5;UBERON:0001468,1.18e-11,5;UBERON:0002242,2.23e-07,3;UBERON:0003068,2.23e-07,3;UBERON:0002328,2.23e-07,3;UBERON:0004880,2.23e-07,3;UBERON:0000059,5.91e-07,11 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,2.08948502559871,0,0,0,0,1.98026164736075,3.97676850873499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.289693037921647,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34323515528495,1.18800285728205,4.69807165629258,0,0,0,0.125118519871964,0.277064115484183,0,0,0.300476117813194,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,1.39432731443422,0.207322110030741,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88919160251872,1.00034104211935,1.08506009479894,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.183138929636687,0.082509499920588,0,0,0,0.386682873168488,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,5.99114583247489,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27947376023316,0,0,0,0,0,0,0.354761064070598,2.74439925886963,2.96365403663912,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842391534340376,0,0,0,0,0.1605880751037,1.81619736471943,0,0,0,0,0,0,0,0,0,0,0,0,3.22317994398167,3.15537356548735,0,0,0,0.593929361665277,0,0.994147647766298,0,0,0,0,1.39473591775749,1.65770349318689,0,0,0,0,0,0,0,3.25523238601881,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,5.46346835376959,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,1.73110911793673,1.99052386215701,1.59223616106011,1.83309043480088,0,0,0,0.202203398942031,2.40773294189637,0,0,0,0,0.789168805698781,2.41981432097328,0,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0,9.08578674858557,0,0,0,0,1.64881328030313,0,3.84167259326905,0,0,0.0633107959558787,0,0,1.49417096317547,0,0,6.87219576995494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,2.7499250881402,0.717873024576814,0.199679000498991,0.858452096273142,0.446342914883745,3.49354056930977,0,0,0,0,0,0,0,0,0,0.803765742325096,0,0.415440338029185,0,0,0,0,0.0788057072991982,1.04909176269996,0,0,0,2.1440859791201,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0.747511887973863,20.4365596629566,0.828478110694391,0.992332043623902,0,0,0,1.63205341010842,2.0055191521816,4.59518365145192,2.62298104567844,0,0,0,0.1251909307065,0,0.665574309221114,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0.189403005275089,1.50940741051545,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0.539124056983409,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55715116387475,0,3.12605604493237,0,0,0,0.135075169236789,0,0,0,0,2.74128883428591,4.46590060550365,0,0,0,0,1.82089681270989,2.04895972216168,1.41923792260222,0,0,0.0679697329768317,0.0657727735628491,0,0,5.72999577808752,0,0,2.73947616152849,0,0,1.57248397188644,0,0,0,6.41369091784202,0,0,0,0.860454717640555,0,0,1.69354820076372,0,0,0,0,0,0,0,0.307988420568741,3.4794432940146,10.1999308542419,0,0,0,0,0,0,0.617393264863557,0.874238242015829,0,4.6578181133242,0,1.17785080268967,0.891139200981258,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,2.19100916473955,2.75237570042724,0.573358332605805,0.788857810965923,0.135982980381829,0,3.7031878836078,0,3.23522940041993,0,0,0,10.5159755839493,0.101988829741982,0,0,0,3.63737751447549,1.07185652062471,0.829169439458779,0.20686599172379,2.77204176471275,7.61806180683969,0.0645889098360061,0.620747142958579,0,1.59117895695412,2.22328907854041,4.35433495793923,1.71116650542641,0.336760265072938,1.79305513481691,13.9717349749326,0,0.106727345877715,3.8614456457388,0,2.34640942403454,2.07810455110873,0.406896178315738,3.99454064511308,2.01273793591026,0 | |phase1_expression=0,0.428201047781966,0,0,0,0,0,0,2.08948502559871,0,0,0,0,1.98026164736075,3.97676850873499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.289693037921647,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34323515528495,1.18800285728205,4.69807165629258,0,0,0,0.125118519871964,0.277064115484183,0,0,0.300476117813194,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,1.39432731443422,0.207322110030741,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88919160251872,1.00034104211935,1.08506009479894,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.183138929636687,0.082509499920588,0,0,0,0.386682873168488,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,5.99114583247489,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27947376023316,0,0,0,0,0,0,0.354761064070598,2.74439925886963,2.96365403663912,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842391534340376,0,0,0,0,0.1605880751037,1.81619736471943,0,0,0,0,0,0,0,0,0,0,0,0,3.22317994398167,3.15537356548735,0,0,0,0.593929361665277,0,0.994147647766298,0,0,0,0,1.39473591775749,1.65770349318689,0,0,0,0,0,0,0,3.25523238601881,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,5.46346835376959,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,1.73110911793673,1.99052386215701,1.59223616106011,1.83309043480088,0,0,0,0.202203398942031,2.40773294189637,0,0,0,0,0.789168805698781,2.41981432097328,0,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0,9.08578674858557,0,0,0,0,1.64881328030313,0,3.84167259326905,0,0,0.0633107959558787,0,0,1.49417096317547,0,0,6.87219576995494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,2.7499250881402,0.717873024576814,0.199679000498991,0.858452096273142,0.446342914883745,3.49354056930977,0,0,0,0,0,0,0,0,0,0.803765742325096,0,0.415440338029185,0,0,0,0,0.0788057072991982,1.04909176269996,0,0,0,2.1440859791201,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0.747511887973863,20.4365596629566,0.828478110694391,0.992332043623902,0,0,0,1.63205341010842,2.0055191521816,4.59518365145192,2.62298104567844,0,0,0,0.1251909307065,0,0.665574309221114,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0.189403005275089,1.50940741051545,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0.539124056983409,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55715116387475,0,3.12605604493237,0,0,0,0.135075169236789,0,0,0,0,2.74128883428591,4.46590060550365,0,0,0,0,1.82089681270989,2.04895972216168,1.41923792260222,0,0,0.0679697329768317,0.0657727735628491,0,0,5.72999577808752,0,0,2.73947616152849,0,0,1.57248397188644,0,0,0,6.41369091784202,0,0,0,0.860454717640555,0,0,1.69354820076372,0,0,0,0,0,0,0,0.307988420568741,3.4794432940146,10.1999308542419,0,0,0,0,0,0,0.617393264863557,0.874238242015829,0,4.6578181133242,0,1.17785080268967,0.891139200981258,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,2.19100916473955,2.75237570042724,0.573358332605805,0.788857810965923,0.135982980381829,0,3.7031878836078,0,3.23522940041993,0,0,0,10.5159755839493,0.101988829741982,0,0,0,3.63737751447549,1.07185652062471,0.829169439458779,0.20686599172379,2.77204176471275,7.61806180683969,0.0645889098360061,0.620747142958579,0,1.59117895695412,2.22328907854041,4.35433495793923,1.71116650542641,0.336760265072938,1.79305513481691,13.9717349749326,0,0.106727345877715,3.8614456457388,0,2.34640942403454,2.07810455110873,0.406896178315738,3.99454064511308,2.01273793591026,0 | ||
|short_description=p1@FGF10 | |||
}} | }} |
Latest revision as of 01:02, 18 September 2015
Short description: | p1@FGF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FGF10_5end |
Coexpression cluster: | NA |
Association with transcript: | 271bp_to_ENST00000513107_5end |
EntrezGene: | FGF10 |
HGNC: | 3666 |
UniProt: | D6RG33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 2.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.48e-16 | 114 |
articulation | 7.89e-14 | 8 |
skeletal joint | 7.89e-14 | 8 |
articular system | 7.89e-14 | 8 |
intervertebral cartilage | 1.18e-11 | 5 |
symphysis | 1.18e-11 | 5 |
nonsynovial joint | 1.18e-11 | 5 |
fibrous joint | 1.18e-11 | 5 |
cartilaginous joint | 1.18e-11 | 5 |
developing mesenchymal condensation | 1.18e-11 | 5 |
pre-cartilage condensation | 1.18e-11 | 5 |
cartilaginous condensation | 1.18e-11 | 5 |
cartilage element | 1.18e-11 | 5 |
post-cranial axial skeletal system | 1.18e-11 | 5 |
vertebral column | 1.18e-11 | 5 |
intervertebral disk | 1.18e-11 | 5 |
intervertebral joint | 1.18e-11 | 5 |
nucleus pulposus | 2.23e-07 | 3 |
axial mesoderm | 2.23e-07 | 3 |
notochord | 2.23e-07 | 3 |
chordamesoderm | 2.23e-07 | 3 |
large intestine | 5.91e-07 | 11 |