FFCP PHASE1:Hg19::chr15:52121841..52121892,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29766 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11873 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002abm.2_5end | |||
|cluster_id=chr15:52121841..52121892,+ | |||
|description=CAGE_peak_1_at_TMOD3_5end | |||
|id=chr15:52121841..52121892,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.67e-20!76;CL:0000839!7.34e-19!70;CL:0000557!2.57e-18!71;CL:0000860!3.18e-17!45;CL:0002194!3.14e-16!63;CL:0000576!3.14e-16!63;CL:0000040!3.14e-16!63;CL:0000559!3.14e-16!63;CL:0002057!6.35e-16!42;CL:0002009!6.98e-16!65;CL:0000063!7.43e-14!578;CL:0000763!1.18e-11!112;CL:0000049!1.18e-11!112;CL:0000738!8.93e-09!140;CL:0002031!5.12e-08!124;CL:0000003!3.12e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.35e-14;33!CL:0002057;6.35e-14;33!CL:0000473;1.02e-11;39!CL:0000234;1.02e-11;39!CL:0000576;4.49e-10;48!CL:0000766;3.95e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.40e-19,72;CL:0000839,9.79e-18,66;CL:0000557,3.40e-17,67;CL:0000473,4.29e-16,48;CL:0000234,4.29e-16,48;CL:0000860,6.35e-16,42;CL:0002057,6.35e-16,42;CL:0002194,3.98e-15,59;CL:0000576,3.98e-15,59;CL:0000040,3.98e-15,59;CL:0000559,3.98e-15,59;CL:0002009,8.76e-15,61;CL:0000763,1.03e-10,108;CL:0000049,1.03e-10,108;CL:0000738,5.52e-08,136;CL:0002031,3.09e-07,120;CL:0000066,9.92e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;9.34e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.56e-16!102;UBERON:0003061!1.56e-16!102;UBERON:0002193!3.88e-16!112;UBERON:0002371!3.87e-15!80;UBERON:0004765!9.39e-15!101;UBERON:0001434!9.39e-15!101;UBERON:0001474!2.16e-14!86;UBERON:0002405!1.20e-10!115;UBERON:0000926!5.07e-07!448;UBERON:0004120!5.07e-07!448;UBERON:0006603!5.07e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.86e-15,98;UBERON:0003061,1.86e-15,98;UBERON:0002193,4.42e-15,108;UBERON:0002371,4.61e-14,76;UBERON:0004765,1.13e-13,90;UBERON:0001474,2.44e-13,82;UBERON:0002405,3.31e-13,93;UBERON:0001434,4.05e-13,100 | |||
|phase1_expression=38.6974947846286,26.9766660102639,33.4061937707452,24.0175916047513,15.6436383049551,30.5318483435129,5.06599756336621,33.481153291622,16.4546945765898,25.8020633326584,17.4450291993107,58.9791704751465,50.6432598198631,41.2141955356955,37.4479034572545,43.0288093729136,50.6263403540141,32.1336439770444,33.1794303177545,30.4109013449666,21.8280739631351,16.6131002383387,31.4859585844162,29.7017502408159,31.2601172591059,41.9509597556252,44.8269218396704,40.6934739391722,31.0757778710634,39.5344280040129,32.8210181430081,41.3739551015517,33.735062903164,36.2358929963452,17.197718528827,24.5952772203239,21.139231632109,51.5215729934646,49.534478525125,42.9681524017387,57.0984459311807,50.8513055649798,61.5605606645706,80.9868190002175,85.0220873299821,92.1819432513702,73.4475756621963,83.8782491564525,88.8857284468947,74.8000220037591,68.1387479367408,81.3498870816733,64.4674422977477,69.7123458270532,65.004713565284,66.2613035189969,91.6964664194362,98.8783331558372,77.7453086622093,98.2042822852846,99.0972544988514,70.918029540144,79.1870720757879,93.34322036666,109.699092201605,150.924469767843,132.661139036057,74.1183562507393,73.5290914972484,67.111353013881,83.5451313634049,134.789614771449,119.306320065213,66.3341599019497,46.7729459923096,55.769199705228,48.6382972864324,43.5512989240368,76.8268304412043,58.1425997232147,61.2663365773198,62.4711405875048,29.9193615584249,31.6760394532036,34.6908609006786,33.7116875827541,34.4340548850971,38.5084134769504,27.1028397841793,30.5297201451317,25.6145836099252,32.8852826047726,25.6123062843903,48.9033915742396,48.7642449793936,28.9722493252585,46.4235057468646,32.2268825454315,40.9146983009023,55.8402894604865,34.8736825297942,29.3537639555535,27.2757419771076,48.3521382881653,42.4232506763766,44.0852450221406,45.4950491125226,41.2454049516674,45.2606529508376,45.8781753844256,30.3985019564433,52.7441616037796,33.6610498377877,44.4117774628924,31.360657141493,60.1672609724076,38.705269853794,36.0808817756761,58.4475488565052,35.3607609899747,42.9715079545236,34.2162736001415,48.0334629858095,54.3943097406278,42.4764470277976,45.6980096444953,55.0155757937101,43.7486632797669,39.3137087801756,42.4335503376601,14.6284119788377,38.9006498628109,51.4007498610992,40.842624219456,37.6003432976917,38.8188670815008,66.0087336052412,34.5510757914871,48.4963612051668,57.2061845453415,52.964375772955,25.6064092598028,29.1436230634034,40.4155042635028,58.7430782514977,56.069775410364,55.7093854574045,20.0332124416487,29.1717404497865,22.6589075811035,49.889364249043,36.9900875895634,38.1854551768354,42.3980956443007,33.9794543330024,61.6264413945751,40.7540184746781,72.0982758082428,87.8742668836174,119.160538144223,51.5621525899708,44.0957821316737,47.1039771067967,76.1062576315948,31.5955359673886,82.2450497496375,85.5456909705707,85.3595022063582,15.3316637465883,18.9853131913626,40.6707871525504,55.3477753231466,81.4338554711483,36.6319003799729,44.2305037008833,40.5217637326655,42.7681654026697,40.4439635255827,50.7175786543651,38.1260768096769,23.4847790605351,35.7667945204882,75.935492637543,67.355336034844,61.1347517644336,55.3968185180449,76.0552220313598,22.2605360242107,26.8457666074076,26.2417037910447,31.8325689575336,47.3261029534372,52.1230880865384,50.9836428329162,46.3429968748608,45.9400346746012,50.3196554325978,85.5362057243079,53.4096567241683,23.6641954103887,13.6537446945085,53.0258758955309,49.9222894289137,72.8678623723401,50.4824264012964,36.4720477000833,51.6818922638693,43.8982548829281,49.6909290858148,40.1487890978907,44.505699243508,41.1124801635631,60.2857296044868,50.7551863889889,41.1318252492813,54.0084263172052,48.9133765909217,46.9526820094053,47.5897975980688,47.8472328183683,39.7610743618608,45.7414525953487,31.0295883928192,92.3786878120559,106.370987030426,131.069700092775,27.5660575852886,32.3372634704424,28.0027402315539,28.7141122392576,30.7831438068267,26.2783698534598,34.4188971125595,41.8106609825375,19.3388889893473,30.6482832501106,25.2657818584355,56.9055708191649,63.7250128495224,60.9757905605209,51.8381671842252,66.6711098922763,65.9612321128849,57.9774625088707,62.2022044447347,65.02226952394,47.9801045506021,22.4386838085513,20.9902745779014,23.5213938216867,30.4212083572394,34.3989525837169,40.1737136543355,15.4512084795128,43.1689419286329,79.4358961682173,89.4464826080298,28.1004383144049,108.068645342503,111.383899525711,13.3581405177233,9.35941306751621,24.5363281442965,48.6907700895323,79.1334599149438,32.9155500895248,33.7979424180926,58.2177705837871,26.8669495306154,28.3300433491308,71.6491487714326,48.4388828838222,56.331210507428,78.7364205488927,122.29098932877,108.032624098698,118.038132922354,91.2590566933841,53.2901924039644,177.851428880436,84.6145450867102,146.995633918407,113.422403339149,156.161890148432,33.9713734463104,15.6615254478894,7.03304683260282,20.5286935227246,26.9408030882708,22.2253862804499,30.5834282914719,46.8707932563608,30.9531648871629,67.1045315261693,37.6180692855133,10.7296933755565,27.049688081792,44.4116654696734,54.0838671939104,21.8626268122821,22.6958611237245,19.4488190681753,44.3231780340257,16.2786481617433,13.9950857252731,44.6258572482417,43.7132096953331,23.7585561880029,50.6418153460105,33.9898048854115,66.6819851184321,26.7572317410619,54.2437658746697,69.5752000294004,48.1645959538081,60.8768259920804,87.0085120748382,45.6061116002874,46.2321725738363,55.8670205308474,40.0143964056892,50.0458130912895,37.519198025556,45.0484057341917,27.442219416026,31.2335649258292,20.8787979449978,26.1325373921584,19.1381625495949,128.829208118915,95.731666945288,146.703091756357,53.0027244226684,19.5066503213274,38.2483683416627,52.2006862442326,52.4581227063656,63.5540732586757,66.6534651308538,30.3955560724996,25.0148254461583,32.0766521006765,49.1526942916223,35.398880360007,49.7843110902115,23.4961388955289,29.8534778715445,58.3085833666542,45.2999821719095,45.9995774132845,50.3191768600791,66.5741758041988,49.8943983993972,34.48698528681,72.7409753385416,36.7664723707326,38.0573273289432,47.5887741632034,49.0604459488003,29.6836132889982,44.1039724275595,31.6059871057366,54.6966859051969,44.6558809097914,42.5329985163451,34.2032242344291,73.9868875419121,145.85628647446,31.3443443489376,27.8599487050277,30.5519886855458,23.4623798711854,60.3800242898612,21.9617935369519,18.9980992049239,56.7867763443671,23.8840106548883,34.8692095816857,61.7519520052119,23.1340879035434,19.5081435031574,14.0473136679359,45.6228528750619,36.5673443928639,25.7455967930505,49.7719919986271,41.5682367129592,25.6450125116389,16.728746930685,22.1257308371726,53.8904490917587,36.9024943217924,33.251328467997,81.5457063954565,44.85415697652,61.0598933407806,27.2611425583784,36.6635708732854,40.3714664529721,39.4212597305757,46.2981255382259,36.6892235602998,45.0848859031174,24.9289699810865,83.7994520880159,101.668545636141,100.814042870721,97.8195740873168,45.554863831134,37.4626692728462,21.6081553749786,30.4953244374328,17.5660990004617,22.6182577939519,27.9839570846919,48.233086832051,52.4743300797131,59.7957112718392,41.7480124693176,13.050787356878,38.5145089230528,21.0014143631118,24.3334078461761,48.2058186323283,38.7097211927837,37.2287191412369,16.5789634890119,17.4361353290309,24.4329904618609,8.28977356452303,38.2630178721117,22.1865308189186,51.0509668665867,35.2099525564745,23.731704490251,18.1950563370221,27.8644369601312,24.9917004594645,10.4179596168004,52.4715801637306,29.0161839056667,27.264467832778,19.7186921772569,45.3179872964803,48.2402791374425,33.1704077877563,33.7023010867068,29.1328536710776,32.6001944030303,25.0452294685372,20.296213774209,52.5372735481296,32.8448115012536,21.7781969722645,55.82727386063,40.4675050310956,43.8025836735826,33.2572615152507,96.483828086923,86.773541178701,88.6979160285155,65.5094265250287,59.0814803135317,45.6612123125676,77.8167973431261,75.6044012133361,72.9675162190729,22.3262308656419,68.3360697236985,29.8949063496859,26.7556572181035,40.1068412074517,31.3024110733022,36.5086164549003,30.3360644577881,37.1520418056791,38.1012448902989,20.1265602970224,21.9021798928498,26.0187534097839,32.1193786334698,25.0634477090067,33.6890637825191,26.8182085423178,24.6195642773078,33.6418527775358,42.2511574049591,33.4892433096219,35.5645011548941,36.7068111766199,60.5703095746325,34.5223655630101,41.8497156422222,22.1773656350306,25.3134695678343,35.2467512719624,35.9309837583782,74.4261550701221,20.9953702626658,40.2310617241697,38.3583798188658,267.155078421475,88.1985102072937,316.375523162209,23.8595435463912,24.3358090390187,48.1966692749182,31.1479322288576,19.0012867315194,37.6578697794522,46.4156978092328,22.1700818111763,89.3828285068833,31.7558798089559,50.6994527888746,94.1820320023985,221.449193073729,18.9281776983943,52.5769352044856,47.896618469388,140.032607582242,15.5093239375235,18.089779141561,13.9729658600836,140.110135463855,70.8425999969185,46.3999728278268,50.4104975904763,114.414142631745,51.2961269436422,26.8899831128342,38.2002043532063,23.6129993109277,28.3437243460429,26.6518129362152,22.8872604475625,27.6448149828062,10.6397142823277,23.693622892629,64.7094473302802,111.399571678604,50.0946182859719,48.9950840142105,116.665335620358,49.2769467809649,62.4722388551546,159.819581025692,96.0858754785536,154.047050269385,21.4605926211047,24.6459002540189,32.4112779705305,41.0584102323269,45.878633030351,43.6336126137191,24.0987240559715,63.5746315921515,24.2647774207231,41.950831696901,47.6359850732381,38.9499551535764,32.8436437255907,52.1015054924668,48.2713814497564,41.8094791439677,31.0145486755722,30.8044751041093,15.0978537876717,24.8799070662625,18.2726267665765,18.0630241323509,44.6115331165165,25.2491594715456,78.5222961670287,30.247679012166,31.831567209571,59.0162653730078,7.9671412289681,15.2421641353953,58.4895407982323,49.9797853372003,53.6825290476355,71.6834578637753,42.6914319044689,52.973725091019,37.8360229570585,120.334664024856,91.3251077028423,38.6145936814887,67.2465386964021,77.8888466877135,77.2554081600981,79.5698778845597,82.3436749986681,32.0369739890146,44.5182059337649,43.1682062637265,36.9609177767561,20.6393194816165,69.4207408708551,53.7865683887791,40.1291630109983,45.3567813751436,28.0976313450507,35.6208814075998,36.7213295424604,74.0441661659089,77.7820872639608,114.782994858379,59.7978506723902,49.2679406131089,33.5574136023499,26.8724048608413,16.8117680838741,35.4584931330262,37.046510539422,60.167161798794,32.8609192849143,39.6581009806601,29.3325342734955,43.7902544991857,29.1531340728527,11.5891032996874,31.0208325844203,32.9870849909826,43.2359860250884,24.4641494007653,30.1739588236667,31.2356103264621,30.5338053659458,60.8281835761147,31.3291328643403,26.242579763707,29.9647493445466,25.077491160543,26.4075718266689,24.9264202817511,50.3941517075361,33.2734840459918,19.622106800542,35.8915115731215,49.4899841838965,42.8553985062935,108.979547288028,31.195997043915,114.573372799709,32.8759850131749,23.8353109331555,20.34148301238,15.7469884508577,21.6055372800317,26.1269888087527,34.7217555531214,37.5162819824479,54.3537789495495,48.724199353654,39.2759986257261,29.1515155606887,15.5139547633861,23.6696357119415,86.9121136452393,124.047443927734,100.380167813633,110.200217874866,70.8348784643704,34.7316215268366,19.3659399259985,32.1532459725565,76.6009509324218,22.8487477415179,28.0772681305424,21.1378447966788,34.0987535938197,46.3309583938191,23.0377726791416,15.0092305829415,25.6641407948325,28.0970505888135,36.3847289040876,17.6353784353529,14.8033039381767,21.3716497615202,12.4352276384151,21.6953653494175,48.7000246775215,20.6067358555028,15.6514710899691,39.7017775679085,40.4324026035698,38.8364103051829,32.1985108967651,38.489888968144,48.9396171878095,28.6050085496154,40.9835803398378,31.86462611947,40.3644559471701,58.6212103162425,36.434052085252,46.4236241060016,53.0823946036295,52.370817767925,54.2614864284203,57.2481490279402,59.7864183105009,58.9962563146759,43.0981322310066,60.3647330578785,51.5077473465128,50.5581778647242,37.6026098783364,47.0452116100426,49.1654253598242,141.327086016089,102.473749776685,81.9166879052216,34.4512465394079,58.263422856654,41.9055678526139,69.5052240798368,87.7535321299288,56.2018633832969,62.2766700803528,55.3037026810608,110.346829890963,106.433737611436,41.7673675298353,44.5605140833246,40.1095142154144,23.9187094542494,81.4516090948644,79.9846338686446,76.2214737232234,45.5377689896514,50.3834462945125,155.314410668591,27.3982732321254,50.9986467937993,45.1203246711337,70.3719782422877,49.3403946674933,82.9485480776306,78.3817347641546,14.9636414425272,27.2796772833605,12.109477522904,18.8932674072184,33.437308400943,17.431143448338,60.6045887226521,21.2285068829833,56.2867700656551,50.3137933107996,20.8148394554222,66.6557533575393,67.6802504950573,21.3241027320246,29.7562810283728,30.1707993618016,13.7427964041306,38.0628261294794,11.0651603942749,15.9860889175533,15.704636228507,50.6442227465292,45.1824040421846,43.2891492511162,34.1955971805001,74.3695086160976,86.2949907575126,25.6601926529994,40.9144186219959,22.5909676947942,26.5714763819251,94.8102234022749,76.9728012297455,114.736322904427,18.302685431585,20.30803056396,25.6291627661468,16.2978632198341,32.271513732075,26.8646305760019,25.306770097854,28.4911415862585,67.8418490766251,21.4280734351315,36.318641999633,26.0995209821752,32.100368980533,54.9067671306734,29.0389648640564,47.3306906047275,19.3034041654202,12.4968269769413,109.447496658555,30.3661727165349,36.9702467325921,23.0959917176523,63.9020532355439,26.4816028947754,51.3907667100319,43.9531552856086,25.8030324477729,22.1219056425817,31.1527019986576,30.599055925254,44.8958364248942,49.3174470708028,36.0215986668234,51.1532149742428,28.8252330409586,54.6693843375212,53.3435913792327,55.4637035750117,29.3256791736384,25.7471300101386,36.3104796811425,26.8453036314702,51.5288726480026,36.9411312696276,14.8908632553216,20.1219101438244,17.397216470073,47.5996773197957,30.1781907866116,21.2877329422664,19.859655159854,65.1698893364799,21.4384007653587,28.5319774341013,65.0578152849973,49.3944606738944,27.2784031889683,33.0950234367772,33.2303931413293,24.3422499222532,34.457382437942,22.8234092895036,68.9904085632537,64.6609355701393,46.6030530048963,22.5867012390339,87.8485377939835,70.931869214854,95.0860195266644,38.7078285770654,23.3951934536316,28.3812374639874,53.1690164591032,11.2185958815009,46.6895238664204,50.7865766894784,57.6592278158465,43.9066847199847,48.4541749578644,34.1911011303064,44.143291073333,18.8780766507041,30.3926712631106,24.8512186896971,43.9257619776559,39.8624987474876,30.2357005890775,15.005991288746,21.5584054259283,29.2715378289163,58.8525790046707,33.8051492678511,50.7022942212648,50.9633404368993,74.6798204786885,34.1148768370964,31.5302814774822,56.170920957416,53.0461616682186,58.8656943347495,57.5929309303191,42.9131859944357,71.0650534973807,32.3383858009478,77.228912914776,26.8577354298695,30.5033225124491,43.2734712407347,43.9447872580998,57.2550825799541,42.0662228605245,33.6596916918395 | |||
|short_description=p1@TMOD3 | |||
}} |
Latest revision as of 01:34, 18 September 2015
Short description: | p1@TMOD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMOD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002abm.2_5end |
EntrezGene: | TMOD3 |
HGNC: | 11873 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.40e-19 | 72 |
myeloid lineage restricted progenitor cell | 9.79e-18 | 66 |
granulocyte monocyte progenitor cell | 3.40e-17 | 67 |
defensive cell | 4.29e-16 | 48 |
phagocyte | 4.29e-16 | 48 |
classical monocyte | 6.35e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.35e-16 | 42 |
monopoietic cell | 3.98e-15 | 59 |
monocyte | 3.98e-15 | 59 |
monoblast | 3.98e-15 | 59 |
promonocyte | 3.98e-15 | 59 |
macrophage dendritic cell progenitor | 8.76e-15 | 61 |
myeloid cell | 1.03e-10 | 108 |
common myeloid progenitor | 1.03e-10 | 108 |
leukocyte | 5.52e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 3.09e-07 | 120 |
epithelial cell | 9.92e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.86e-15 | 98 |
blood island | 1.86e-15 | 98 |
hemolymphoid system | 4.42e-15 | 108 |
bone marrow | 4.61e-14 | 76 |
skeletal element | 1.13e-13 | 90 |
bone element | 2.44e-13 | 82 |
immune system | 3.31e-13 | 93 |
skeletal system | 4.05e-13 | 100 |