FFCP PHASE1:Hg19::chr15:52216569..52216591,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:52216569..52216591,+ to FFCP PHASE1:Hg19::chr15:52216569..52216591,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29766 | |EntrezGene=29766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11873 | |HGNC=11873 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558666_5end | |||
|cluster_id=chr15:52216569..52216591,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_12_at_TMOD3_5end | |||
|id=chr15:52216569..52216591,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.58e-32;2!UBERON:0006222;7.57e-17;1!UBERON:0010226;1.65e-16;1 | |||
|ontology_enrichment_disease=DOID:114!1.24e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.29e-59!57;UBERON:0005068!5.29e-59!57;UBERON:0006241!5.29e-59!57;UBERON:0007135!5.29e-59!57;UBERON:0002780!1.49e-57!41;UBERON:0001890!1.49e-57!41;UBERON:0006240!1.49e-57!41;UBERON:0007023!2.68e-56!115;UBERON:0003080!5.01e-56!42;UBERON:0002616!2.66e-53!59;UBERON:0003075!1.34e-46!86;UBERON:0007284!1.34e-46!86;UBERON:0002346!4.23e-44!90;UBERON:0000955!1.29e-43!69;UBERON:0006238!1.29e-43!69;UBERON:0001893!9.53e-43!34;UBERON:0002791!2.14e-40!33;UBERON:0001017!2.31e-40!82;UBERON:0001869!3.33e-38!32;UBERON:0005743!4.30e-38!86;UBERON:0003056!2.13e-36!61;UBERON:0002020!1.17e-35!34;UBERON:0003528!1.17e-35!34;UBERON:0000073!1.13e-33!94;UBERON:0001016!1.13e-33!94;UBERON:0000153!4.25e-29!129;UBERON:0007811!4.25e-29!129;UBERON:0000033!2.35e-27!123;UBERON:0004121!7.17e-24!169;UBERON:0002619!8.76e-24!22;UBERON:0009663!2.16e-23!7;UBERON:0000924!4.39e-23!173;UBERON:0006601!4.39e-23!173;UBERON:0002420!4.47e-23!9;UBERON:0007245!4.47e-23!9;UBERON:0010009!4.47e-23!9;UBERON:0010011!4.47e-23!9;UBERON:0000454!4.47e-23!9;UBERON:0001950!1.50e-22!20;UBERON:0000956!1.22e-20!25;UBERON:0000203!1.22e-20!25;UBERON:0002308!6.16e-18!9;UBERON:0000125!6.16e-18!9;UBERON:0000025!1.57e-17!194;UBERON:0001894!8.99e-17!7;UBERON:0006222!8.99e-17!7;UBERON:0004111!6.09e-15!241;UBERON:0000369!1.06e-14!4;UBERON:0002435!1.06e-14!4;UBERON:0000204!1.06e-14!4;UBERON:0010082!1.06e-14!4;UBERON:0000200!5.04e-13!6;UBERON:0000477!9.50e-12!286;UBERON:0005383!1.68e-11!3;UBERON:0005382!1.68e-11!3;UBERON:0004151!7.28e-11!3;UBERON:0003978!9.45e-11!3;UBERON:0009751!9.45e-11!3;UBERON:0000946!9.45e-11!3;UBERON:0002523!9.45e-11!3;UBERON:0005983!9.45e-11!3;UBERON:0002165!9.45e-11!3;UBERON:0002062!9.45e-11!3;UBERON:0007280!9.45e-11!3;UBERON:0002771!2.48e-10!3;UBERON:0000483!4.68e-10!309;UBERON:0001871!7.00e-10!7;UBERON:0000119!7.36e-10!312;UBERON:0000064!8.77e-10!219;UBERON:0007100!2.34e-08!27;UBERON:0001873!3.28e-08!2;UBERON:0010122!3.28e-08!2;UBERON:0000062!4.26e-08!511;UBERON:0001897!5.82e-08!2;UBERON:0001875!6.02e-08!2;UBERON:0006514!6.02e-08!2;UBERON:0003296!9.20e-08!4;UBERON:0010133!9.20e-08!4;UBERON:0002133!9.27e-08!2;UBERON:0002081!1.09e-07!2;UBERON:0000007!1.61e-07!2;UBERON:0000341!2.02e-07!2;UBERON:0003076!8.89e-07!15;UBERON:0003057!8.89e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;2.83e-78;7!UBERON:0000369;6.52e-62;4!UBERON:0002435;6.52e-62;4!UBERON:0000204;6.52e-62;4!UBERON:0002420;6.58e-61;9!UBERON:0000125;6.58e-61;9!UBERON:0007245;6.58e-61;9!UBERON:0002308;6.58e-61;9!UBERON:0010009;6.58e-61;9!UBERON:0010011;6.58e-61;9!UBERON:0000454;6.58e-61;9!UBERON:0005383;2.95e-47;3!UBERON:0005382;2.95e-47;3!UBERON:0001873;4.58e-32;2!UBERON:0001875;3.46e-31;2!UBERON:0006514;3.46e-31;2!UBERON:0002780;1.03e-18;41!UBERON:0001890;1.03e-18;41!UBERON:0001874;4.72e-17;1!UBERON:0002791;1.25e-16;32!UBERON:0001882;1.65e-16;1!UBERON:0002084;1.65e-16;1!UBERON:0002082;1.65e-16;1!UBERON:0005403;1.65e-16;1!UBERON:0001869;1.20e-15;32!UBERON:0003528;1.40e-14;34!UBERON:0002020;1.40e-14;34!UBERON:0001893;4.79e-14;34!UBERON:0000073;3.91e-13;53!UBERON:0002616;3.91e-13;53!UBERON:0000955;2.56e-11;68!UBERON:0001017;1.54e-10;75!UBERON:0001894;9.94e-10;7!UBERON:0001016;2.92e-09;83!UBERON:0000341;6.42e-09;2!UBERON:0001897;6.42e-09;2!UBERON:0010225;6.42e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,3.71e-78,7;UBERON:0000369,4.09e-62,4;UBERON:0002435,4.09e-62,4;UBERON:0000204,4.09e-62,4;UBERON:0010082,4.09e-62,4;UBERON:0002420,8.12e-61,9;UBERON:0000125,8.12e-61,9;UBERON:0007245,8.12e-61,9;UBERON:0002308,8.12e-61,9;UBERON:0010009,8.12e-61,9;UBERON:0010011,8.12e-61,9;UBERON:0000454,8.12e-61,9;UBERON:0005383,2.96e-47,3;UBERON:0005382,2.96e-47,3;UBERON:0001873,4.59e-32,2;UBERON:0010122,4.59e-32,2;UBERON:0001875,7.48e-31,2;UBERON:0006514,7.48e-31,2;UBERON:0002780,8.79e-23,41;UBERON:0001890,8.79e-23,41;UBERON:0003080,8.79e-23,41;UBERON:0006240,8.79e-23,41;UBERON:0000073,3.11e-22,53;UBERON:0002616,3.11e-22,53;UBERON:0001049,5.00e-21,56;UBERON:0005068,5.00e-21,56;UBERON:0006241,5.00e-21,56;UBERON:0007135,5.00e-21,56;UBERON:0007023,2.81e-18,114;UBERON:0001874,4.72e-17,1;UBERON:0000955,5.47e-17,68;UBERON:0006238,5.47e-17,68;UBERON:0001882,1.04e-16,1;UBERON:0005403,1.04e-16,1;UBERON:0002791,1.53e-16,32;UBERON:0001869,1.53e-16,32;UBERON:0002084,1.65e-16,1;UBERON:0002082,1.65e-16,1;UBERON:0010226,1.65e-16,1;UBERON:0003528,1.38e-15,34;UBERON:0002020,1.38e-15,34;UBERON:0001893,1.38e-15,34;UBERON:0003056,2.98e-15,61;UBERON:0001017,3.30e-14,81;UBERON:0003075,3.30e-14,82;UBERON:0007284,3.30e-14,82;UBERON:0002346,1.61e-13,86;UBERON:0001016,9.68e-13,89;UBERON:0010371,4.62e-11,104;UBERON:0010314,1.30e-10,132;UBERON:0001894,8.35e-10,7;UBERON:0006222,8.35e-10,7;UBERON:0001897,4.70e-09,2;UBERON:0010225,4.70e-09,2;UBERON:0000341,6.94e-09,2;UBERON:0000025,5.45e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08593108651071,8.56234714240396,1.52581736317083,0.221158519862449,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0.123563938946503,0,0.067401132980677,0,3.51396668588009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.443175571691151,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,1.23214841002794,0,0,0,0.837847203816763,0.687481272035051,0.717873024576814,0.599037001496973,0.858452096273142,1.78537165953498,0.403100834920358,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.876336514945499,0.573409195690071,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79841830270087,0,0.798169295285756,0.41023272848151,0,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.826747186004736,0.317079050969534,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0.682986574053893,0,0,0,0.135939465953663,0.460409414939944,0,0,0,9.11270421512811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0.829169439458779,1.96522692137601,1.27940389140589,0.23806443146374,0,0,0,0,0,0.653150243690884,0.684466602170562,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08593108651071,8.56234714240396,1.52581736317083,0.221158519862449,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0.123563938946503,0,0.067401132980677,0,3.51396668588009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.443175571691151,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,1.23214841002794,0,0,0,0.837847203816763,0.687481272035051,0.717873024576814,0.599037001496973,0.858452096273142,1.78537165953498,0.403100834920358,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.876336514945499,0.573409195690071,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79841830270087,0,0.798169295285756,0.41023272848151,0,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.826747186004736,0.317079050969534,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0.682986574053893,0,0,0,0.135939465953663,0.460409414939944,0,0,0,9.11270421512811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0.829169439458779,1.96522692137601,1.27940389140589,0.23806443146374,0,0,0,0,0,0.653150243690884,0.684466602170562,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@TMOD3 | |||
}} | }} |
Latest revision as of 01:46, 18 September 2015
Short description: | p12@TMOD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TMOD3_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000558666_5end |
EntrezGene: | TMOD3 |
HGNC: | 11873 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data