FFCP PHASE1:Hg19::chr2:169938264..169938276,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10170 | |EntrezGene=10170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16888 | |HGNC=16888 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_BC040380_5end | |association_with_transcript=59bp_to_BC040380_5end | ||
|cluster_id=chr2:169938264..169938276,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_9_at_DHRS9_5end | |description=CAGE_peak_9_at_DHRS9_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002548!2.16e-17!6;CL:0002494!2.57e-15!16;CL:0002274!2.27e-13!5;CL:0000457!2.27e-13!5;CL:0002191!2.27e-13!5;CL:0000097!2.27e-13!5;CL:0000831!2.27e-13!5;CL:0002028!2.27e-13!5;CL:0000163!5.25e-11!9;CL:0002594!1.17e-09!4 | |ontology_enrichment_celltype=CL:0002548!2.16e-17!6;CL:0002494!2.57e-15!16;CL:0002274!2.27e-13!5;CL:0000457!2.27e-13!5;CL:0002191!2.27e-13!5;CL:0000097!2.27e-13!5;CL:0000831!2.27e-13!5;CL:0002028!2.27e-13!5;CL:0000163!5.25e-11!9;CL:0002594!1.17e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0002494;8.53e-26;16!CL:0002548;2.33e-25;6!CL:0000746;6.09e-23;3!CL:0000737;1.78e-17;4 | |ontology_enrichment_celltype_v019=CL:0002494;8.53e-26;16!CL:0002548;2.33e-25;6!CL:0000746;6.09e-23;3!CL:0000737;1.78e-17;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,7.49e-26,16;CL:0002548,1.97e-25,6;CL:0000746,5.76e-23,3;CL:0000513,5.76e-23,3;CL:0000737,1.71e-17,4 | |||
|ontology_enrichment_development_v019=CL:0000513;6.09e-23;3!UBERON:0010227;3.75e-18;1!UBERON:0000358;6.23e-18;1 | |ontology_enrichment_development_v019=CL:0000513;6.09e-23;3!UBERON:0010227;3.75e-18;1!UBERON:0000358;6.23e-18;1 | ||
|ontology_enrichment_disease=DOID:114!6.09e-09!2 | |ontology_enrichment_disease=DOID:114!6.09e-09!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.12e-30!27;UBERON:0000948!2.39e-22!24;UBERON:0005498!2.39e-22!24;UBERON:0004140!2.39e-22!24;UBERON:0009881!2.39e-22!24;UBERON:0004141!2.39e-22!24;UBERON:0003084!2.39e-22!24;UBERON:0007005!2.39e-22!24;UBERON:0004139!2.39e-22!24;UBERON:0004291!2.39e-22!24;UBERON:0001009!1.94e-14!113;UBERON:0004872!2.88e-14!84;UBERON:0003103!3.03e-11!69;UBERON:0004535!6.19e-11!110;UBERON:0001310!1.17e-09!4;UBERON:0003914!8.46e-09!118;UBERON:0003081!5.16e-07!216 | |ontology_enrichment_uberon=UBERON:0007100!1.12e-30!27;UBERON:0000948!2.39e-22!24;UBERON:0005498!2.39e-22!24;UBERON:0004140!2.39e-22!24;UBERON:0009881!2.39e-22!24;UBERON:0004141!2.39e-22!24;UBERON:0003084!2.39e-22!24;UBERON:0007005!2.39e-22!24;UBERON:0004139!2.39e-22!24;UBERON:0004291!2.39e-22!24;UBERON:0001009!1.94e-14!113;UBERON:0004872!2.88e-14!84;UBERON:0003103!3.03e-11!69;UBERON:0004535!6.19e-11!110;UBERON:0001310!1.17e-09!4;UBERON:0003914!8.46e-09!118;UBERON:0003081!5.16e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;2.16e-36;22!UBERON:0007100;5.27e-32;25!UBERON:0002079;3.75e-18;1!UBERON:0002135;4.44e-18;1!UBERON:0002081;9.46e-10;2!UBERON:0002133;1.03e-09;2!UBERON:0003103;7.24e-08;61!UBERON:0004151;6.50e-07;3!UBERON:0003978;6.88e-07;3!UBERON:0000946;6.88e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000948;2.16e-36;22!UBERON:0007100;5.27e-32;25!UBERON:0002079;3.75e-18;1!UBERON:0002135;4.44e-18;1!UBERON:0002081;9.46e-10;2!UBERON:0002133;1.03e-09;2!UBERON:0003103;7.24e-08;61!UBERON:0004151;6.50e-07;3!UBERON:0003978;6.88e-07;3!UBERON:0000946;6.88e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,2.13e-33,24;UBERON:0005498,2.13e-33,24;UBERON:0004140,2.13e-33,24;UBERON:0009881,2.13e-33,24;UBERON:0004141,2.13e-33,24;UBERON:0003084,2.13e-33,24;UBERON:0007005,2.13e-33,24;UBERON:0004139,2.13e-33,24;UBERON:0004291,2.13e-33,24;UBERON:0007100,1.15e-29,27;UBERON:0002079,3.75e-18,1;UBERON:0002135,4.44e-18,1;UBERON:0003103,1.37e-11,68;UBERON:0002081,9.46e-10,2;UBERON:0010227,9.46e-10,2;UBERON:0002133,1.03e-09,2;UBERON:0004872,2.03e-09,83;UBERON:0001048,1.21e-07,160;UBERON:0010314,2.19e-07,132;UBERON:0004535,4.64e-07,109;UBERON:0004151,6.50e-07,3;UBERON:0003978,6.88e-07,3;UBERON:0009751,6.88e-07,3;UBERON:0000946,6.88e-07,3;UBERON:0002523,6.88e-07,3;UBERON:0005983,6.88e-07,3;UBERON:0002165,6.88e-07,3;UBERON:0002062,6.88e-07,3;UBERON:0007280,6.88e-07,3;UBERON:0001009,7.40e-07,112 | |||
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| ||
|short_description=p9@DHRS9 | |short_description=p9@DHRS9 | ||
}} | }} |
Latest revision as of 01:54, 18 September 2015
Short description: | p9@DHRS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DHRS9_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 59bp_to_BC040380_5end |
EntrezGene: | DHRS9 |
HGNC: | 16888 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 7.49e-26 | 16 |
cardiac fibroblast | 1.97e-25 | 6 |
cardiac muscle cell | 5.76e-23 | 3 |
cardiac muscle myoblast | 5.76e-23 | 3 |
striated muscle cell | 1.71e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
heart | 2.13e-33 | 24 |
primitive heart tube | 2.13e-33 | 24 |
primary heart field | 2.13e-33 | 24 |
anterior lateral plate mesoderm | 2.13e-33 | 24 |
heart tube | 2.13e-33 | 24 |
heart primordium | 2.13e-33 | 24 |
cardiac mesoderm | 2.13e-33 | 24 |
cardiogenic plate | 2.13e-33 | 24 |
heart rudiment | 2.13e-33 | 24 |
primary circulatory organ | 1.15e-29 | 27 |
left cardiac atrium | 3.75e-18 | 1 |
mitral valve | 4.44e-18 | 1 |
compound organ | 1.37e-11 | 68 |
cardiac atrium | 9.46e-10 | 2 |
future cardiac atrium | 9.46e-10 | 2 |
atrioventricular valve | 1.03e-09 | 2 |
splanchnic layer of lateral plate mesoderm | 2.03e-09 | 83 |
primordium | 1.21e-07 | 160 |
structure with developmental contribution from neural crest | 2.19e-07 | 132 |
cardiovascular system | 4.64e-07 | 109 |
cardiac chamber | 6.50e-07 | 3 |
valve | 6.88e-07 | 3 |
cardiac mesenchyme | 6.88e-07 | 3 |
cardial valve | 6.88e-07 | 3 |
tunica intima | 6.88e-07 | 3 |
heart layer | 6.88e-07 | 3 |
endocardium | 6.88e-07 | 3 |
endocardial cushion | 6.88e-07 | 3 |
presumptive endocardium | 6.88e-07 | 3 |
circulatory system | 7.40e-07 | 112 |