FFCP PHASE1:Hg19::chr12:3068466..3068495,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:3068466..3068495,+ to FFCP PHASE1:Hg19::chr12:3068466..3068495,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7004 | |EntrezGene=7004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11717 | |HGNC=11717 | ||
|TSSclassifier=strong | |||
|UniProt=Q15561,Q8NEV5 | |UniProt=Q15561,Q8NEV5 | ||
|association_with_transcript=0bp_to_ENST00000358409,NM_003213,NM_201441,uc010sej.1,uc010sek.1_5end | |||
|cluster_id=chr12:3068466..3068495,+ | |||
|description=CAGE_peak_3_at_TEAD4_5end | |||
|id=chr12:3068466..3068495,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.17e-36!254;CL:0002321!2.30e-22!248;CL:0000220!1.67e-21!246;CL:0000133!2.59e-11!59;CL:0000221!4.86e-11!71;CL:0000076!3.68e-10!62;CL:0000333!4.01e-10!41;CL:0002078!5.52e-10!44;CL:0002139!3.64e-09!24;CL:0000115!4.71e-09!35;CL:0000071!8.71e-08!18;CL:0002546!8.71e-08!18;CL:0000213!1.77e-07!57;CL:0000215!1.77e-07!57;CL:1000497!4.52e-07!18;CL:0002518!4.52e-07!18;CL:0000222!7.20e-07!119;CL:0002319!8.29e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.75e-10;24!CL:0000115;3.26e-09;36!CL:0000071;1.65e-08;18!CL:1000497;1.60e-07;17!CL:0002518;1.60e-07;17!CL:0002078;1.62e-07;45!CL:0002319;7.23e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.23e-32,253;CL:0002321,7.87e-20,250;CL:0000133,2.57e-11,59;CL:0002078,6.44e-11,45;CL:0000115,1.14e-10,36;CL:0000333,1.56e-10,41;CL:0000221,2.66e-10,72;CL:0002139,6.54e-10,24;CL:0000076,6.22e-09,63;CL:0000071,2.13e-08,18;CL:0002546,2.13e-08,18;CL:1000497,1.97e-07,17;CL:0002518,1.97e-07,17;CL:0000213,5.29e-07,58;CL:0000215,5.29e-07,58;CL:0002319,5.78e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002546;1.65e-08;18 | |||
|ontology_enrichment_disease=DOID:0050687!9.21e-26!143;DOID:162!2.78e-21!235;DOID:14566!5.47e-21!239;DOID:305!3.56e-19!106;DOID:3095!5.68e-08!22;DOID:2994!5.68e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.11e-09;22!DOID:2994;7.11e-09;22!DOID:0050687;5.68e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.72e-25,143;DOID:162,3.13e-21,235;DOID:14566,5.29e-21,239;DOID:305,4.34e-18,106;DOID:3095,4.91e-09,22;DOID:2994,4.91e-09,22;DOID:0050686,6.14e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0003104!3.35e-09!238;UBERON:0009142!3.35e-09!238;UBERON:0000464!1.14e-08!104;UBERON:0000119!1.67e-08!312;UBERON:0000483!2.97e-08!309;UBERON:0005177!4.84e-08!107;UBERON:0001048!5.14e-08!168;UBERON:0001986!8.71e-08!18;UBERON:0004638!8.71e-08!18;UBERON:0004852!8.71e-08!18;UBERON:0002100!9.34e-08!216;UBERON:0000466!1.48e-07!126;UBERON:0000487!2.60e-07!22;UBERON:0006914!5.93e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.65e-08;18!UBERON:0001986;1.65e-08;18!UBERON:0004852;1.65e-08;18!UBERON:0000487;1.05e-07;22!UBERON:0000490;1.28e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.13e-08,18;UBERON:0001986,2.13e-08,18;UBERON:0004852,2.13e-08,18;UBERON:0005177,9.21e-08,101;UBERON:0000487,1.16e-07,22 | |||
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| ||
|short_description=p3@TEAD4 | |||
}} | }} |
Latest revision as of 02:31, 18 September 2015
Short description: | p3@TEAD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TEAD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358409, NM_003213, NM_201441, uc010sej.1, uc010sek.1_5end |
EntrezGene: | TEAD4 |
HGNC: | 11717 |
UniProt: | Q15561Q8NEV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.23e-32 | 253 |
embryonic cell | 7.87e-20 | 250 |
neurectodermal cell | 2.57e-11 | 59 |
meso-epithelial cell | 6.44e-11 | 45 |
endothelial cell | 1.14e-10 | 36 |
migratory neural crest cell | 1.56e-10 | 41 |
ectodermal cell | 2.66e-10 | 72 |
endothelial cell of vascular tree | 6.54e-10 | 24 |
squamous epithelial cell | 6.22e-09 | 63 |
blood vessel endothelial cell | 2.13e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.13e-08 | 18 |
kidney cell | 1.97e-07 | 17 |
kidney epithelial cell | 1.97e-07 | 17 |
lining cell | 5.29e-07 | 58 |
barrier cell | 5.29e-07 | 58 |
neural cell | 5.78e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.13e-08 | 18 |
endothelium | 2.13e-08 | 18 |
cardiovascular system endothelium | 2.13e-08 | 18 |
trunk region element | 9.21e-08 | 101 |
simple squamous epithelium | 1.16e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.72e-25 | 143 |
cancer | 3.13e-21 | 235 |
disease of cellular proliferation | 5.29e-21 | 239 |
carcinoma | 4.34e-18 | 106 |
germ cell and embryonal cancer | 4.91e-09 | 22 |
germ cell cancer | 4.91e-09 | 22 |
organ system cancer | 6.14e-07 | 137 |