FFCP PHASE1:Hg19::chr12:3068544..3068597,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7004 | |EntrezGene=7004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11717 | |HGNC=11717 | ||
|TSSclassifier=strong | |||
|UniProt=Q15561 | |UniProt=Q15561 | ||
|association_with_transcript=0bp_to_ENST00000359864,ENST00000536826,ENST00000540314_5end | |association_with_transcript=0bp_to_ENST00000359864,ENST00000536826,ENST00000540314_5end | ||
|cluster_id=chr12:3068544..3068597,+ | |||
|description=CAGE_peak_1_at_TEAD4_5end | |description=CAGE_peak_1_at_TEAD4_5end | ||
|id=chr12:3068544..3068597,+ | |id=chr12:3068544..3068597,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.58e-38!254;CL:0002321!1.06e-26!248;CL:0000220!1.06e-25!246;CL:0000055!1.16e-15!180;CL:0000222!2.09e-15!119;CL:0000213!8.62e-13!57;CL:0000215!8.62e-13!57;CL:0000076!2.44e-12!62;CL:0002078!2.32e-10!44;CL:0000115!3.41e-09!35;CL:0000548!5.13e-09!679;CL:0000004!5.13e-09!679;CL:0000255!5.13e-09!679;CL:0000012!2.47e-08!682;CL:0000071!3.22e-08!18;CL:0002546!3.22e-08!18;CL:0002139!4.51e-08!24 | |ontology_enrichment_celltype=CL:0000066!1.58e-38!254;CL:0002321!1.06e-26!248;CL:0000220!1.06e-25!246;CL:0000055!1.16e-15!180;CL:0000222!2.09e-15!119;CL:0000213!8.62e-13!57;CL:0000215!8.62e-13!57;CL:0000076!2.44e-12!62;CL:0002078!2.32e-10!44;CL:0000115!3.41e-09!35;CL:0000548!5.13e-09!679;CL:0000004!5.13e-09!679;CL:0000255!5.13e-09!679;CL:0000012!2.47e-08!682;CL:0000071!3.22e-08!18;CL:0002546!3.22e-08!18;CL:0002139!4.51e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.13e-08;36!CL:0000071;2.56e-08;18!CL:0002139;3.51e-08;24!CL:0000213;4.68e-08;58!CL:0000215;4.68e-08;58!CL:0002078;1.37e-07;45!CL:1000449;6.37e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.68e-39,253;CL:0002321,3.67e-27,250;CL:0000222,8.76e-16,121;CL:0000213,1.20e-13,58;CL:0000215,1.20e-13,58;CL:0000076,3.35e-12,63;CL:0002078,3.93e-11,45;CL:0000115,5.74e-10,36;CL:0000071,2.70e-08,18;CL:0002546,2.70e-08,18;CL:0002139,3.80e-08,24;CL:1000449,6.16e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;2.56e-08;18 | |||
|ontology_enrichment_disease=DOID:0050687!1.73e-23!143;DOID:305!3.12e-19!106;DOID:162!5.12e-11!235;DOID:14566!1.85e-10!239;DOID:7!5.19e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:299;9.20e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.01e-23,143;DOID:305,6.68e-19,106;DOID:162,7.85e-11,235;DOID:14566,2.65e-10,239;DOID:7,4.48e-07,39;DOID:299,9.40e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.46e-17!238;UBERON:0009142!1.46e-17!238;UBERON:0002100!6.31e-14!216;UBERON:0003914!2.67e-13!118;UBERON:0000481!9.37e-13!347;UBERON:0000119!1.20e-12!312;UBERON:0000483!6.77e-12!309;UBERON:0000490!7.81e-12!138;UBERON:0001048!3.56e-11!168;UBERON:0005256!6.81e-11!143;UBERON:0000475!1.64e-08!365;UBERON:0005177!1.70e-08!107;UBERON:0001986!3.22e-08!18;UBERON:0004638!3.22e-08!18;UBERON:0004852!3.22e-08!18;UBERON:0000077!1.11e-07!130;UBERON:0000468!1.37e-07!659;UBERON:0002049!1.63e-07!79;UBERON:0007798!1.63e-07!79;UBERON:0009569!2.01e-07!113;UBERON:0000487!2.27e-07!22;UBERON:0006914!2.29e-07!25;UBERON:0004119!2.70e-07!169;UBERON:0000925!2.70e-07!169;UBERON:0006595!2.70e-07!169;UBERON:0000477!4.00e-07!286;UBERON:0001007!4.34e-07!155;UBERON:0001555!4.34e-07!155;UBERON:0007026!4.34e-07!155;UBERON:0004872!5.00e-07!84;UBERON:0005172!6.73e-07!55;UBERON:0005173!6.73e-07!55;UBERON:0003103!7.54e-07!69;UBERON:0002113!9.38e-07!27;UBERON:0003918!9.38e-07!27;UBERON:0005095!9.38e-07!27;UBERON:0007687!9.38e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.56e-08;18!UBERON:0001986;2.56e-08;18!UBERON:0004852;2.56e-08;18!UBERON:0000490;3.21e-08;33!UBERON:0002113;1.14e-07;24!UBERON:0011143;1.14e-07;24!UBERON:0006914;1.67e-07;25!UBERON:0000487;1.74e-07;22!UBERON:0006555;6.37e-07;15!UBERON:0004819;6.37e-07;15!UBERON:0001285;6.37e-07;15!UBERON:0007684;6.37e-07;15 | |||
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| ||
|short_description=p1@TEAD4 | |short_description=p1@TEAD4 | ||
}} | }} |
Latest revision as of 02:32, 18 September 2015
Short description: | p1@TEAD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TEAD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359864, ENST00000536826, ENST00000540314_5end |
EntrezGene: | TEAD4 |
HGNC: | 11717 |
UniProt: | Q15561 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.68e-39 | 253 |
embryonic cell | 3.67e-27 | 250 |
mesodermal cell | 8.76e-16 | 121 |
lining cell | 1.20e-13 | 58 |
barrier cell | 1.20e-13 | 58 |
squamous epithelial cell | 3.35e-12 | 63 |
meso-epithelial cell | 3.93e-11 | 45 |
endothelial cell | 5.74e-10 | 36 |
blood vessel endothelial cell | 2.70e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.70e-08 | 18 |
endothelial cell of vascular tree | 3.80e-08 | 24 |
epithelial cell of nephron | 6.16e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk | 9.71e-15 | 199 |
epithelial tube | 1.26e-13 | 117 |
mesenchyme | 5.63e-13 | 160 |
entire embryonic mesenchyme | 5.63e-13 | 160 |
unilaminar epithelium | 7.05e-13 | 148 |
cell layer | 1.85e-10 | 309 |
epithelium | 8.92e-10 | 306 |
trunk region element | 1.37e-09 | 101 |
trunk mesenchyme | 2.04e-09 | 122 |
primordium | 1.12e-08 | 160 |
blood vessel endothelium | 2.70e-08 | 18 |
endothelium | 2.70e-08 | 18 |
cardiovascular system endothelium | 2.70e-08 | 18 |
subdivision of trunk | 1.21e-07 | 112 |
vasculature | 1.28e-07 | 78 |
vascular system | 1.28e-07 | 78 |
epithelial vesicle | 1.47e-07 | 78 |
simple squamous epithelium | 1.70e-07 | 22 |
squamous epithelium | 1.73e-07 | 25 |
abdomen element | 2.67e-07 | 54 |
abdominal segment element | 2.67e-07 | 54 |
kidney | 2.98e-07 | 26 |
kidney mesenchyme | 2.98e-07 | 26 |
upper urinary tract | 2.98e-07 | 26 |
kidney rudiment | 2.98e-07 | 26 |
kidney field | 2.98e-07 | 26 |
splanchnic layer of lateral plate mesoderm | 3.51e-07 | 83 |
compound organ | 4.84e-07 | 68 |
nephron epithelium | 6.16e-07 | 15 |
renal tubule | 6.16e-07 | 15 |
nephron tubule | 6.16e-07 | 15 |
nephron | 6.16e-07 | 15 |
uriniferous tubule | 6.16e-07 | 15 |
nephrogenic mesenchyme | 6.16e-07 | 15 |
vessel | 7.44e-07 | 68 |
cortex | 9.87e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.01e-23 | 143 |
carcinoma | 6.68e-19 | 106 |
cancer | 7.85e-11 | 235 |
disease of cellular proliferation | 2.65e-10 | 239 |
disease of anatomical entity | 4.48e-07 | 39 |
adenocarcinoma | 9.40e-07 | 25 |