FFCP PHASE1:Hg19::chr12:3069037..3069119,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7004 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11717 | |||
|TSSclassifier=strong | |||
|UniProt=Q6MZR9 | |||
|association_with_transcript=0bp_to_ENST00000397122,ENST00000443986_5end | |||
|cluster_id=chr12:3069037..3069119,+ | |||
|description=CAGE_peak_2_at_TEAD4_5end | |||
|id=chr12:3069037..3069119,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.89e-23!254;CL:0002321!2.16e-20!248;CL:0000220!1.09e-19!246;CL:0000222!2.16e-16!119;CL:0000213!2.04e-12!57;CL:0000215!2.04e-12!57;CL:0002078!4.97e-12!44;CL:0000115!3.65e-11!35;CL:0000055!3.72e-11!180;CL:1000497!7.99e-11!18;CL:0002518!7.99e-11!18;CL:0002139!1.32e-10!24;CL:1000449!4.95e-10!16;CL:0000071!9.76e-10!18;CL:0002546!9.76e-10!18;CL:0002681!3.28e-08!13;CL:0002584!3.28e-08!13;CL:0000076!4.53e-08!62;CL:1000507!1.34e-07!12;CL:1000494!1.34e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.56e-11;17!CL:0002518;2.56e-11;17!CL:0002139;5.38e-11;24!CL:1000449;1.53e-10;15!CL:0000115;2.23e-10;36!CL:0000071;5.03e-10;18!CL:0002078;6.18e-09;45!CL:0002681;1.21e-08;12!CL:0002584;1.21e-08;12!CL:0000213;4.60e-08;58!CL:0000215;4.60e-08;58!CL:1000507;1.77e-07;10!CL:1000494;1.77e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.62e-22,253;CL:0002321,1.86e-19,250;CL:0000222,1.60e-16,121;CL:0000213,3.24e-13,58;CL:0000215,3.24e-13,58;CL:0002078,5.22e-13,45;CL:0000115,3.71e-12,36;CL:1000497,2.49e-11,17;CL:0002518,2.49e-11,17;CL:0002139,8.73e-11,24;CL:1000449,1.54e-10,15;CL:0000071,6.73e-10,18;CL:0002546,6.73e-10,18;CL:0002681,1.12e-08,12;CL:0002584,1.12e-08,12;CL:0000076,7.23e-08,63;CL:1000507,1.77e-07,10;CL:1000494,1.77e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;5.03e-10;18 | |||
|ontology_enrichment_disease=DOID:0050687!1.85e-09!143;DOID:305!6.38e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.69e-09,143;DOID:305,8.46e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!4.44e-22!238;UBERON:0009142!4.44e-22!238;UBERON:0000481!2.20e-21!347;UBERON:0000119!6.56e-21!312;UBERON:0003914!2.15e-20!118;UBERON:0000483!8.16e-20!309;UBERON:0003103!8.16e-17!69;UBERON:0000477!1.28e-16!286;UBERON:0002100!4.62e-16!216;UBERON:0000490!3.65e-14!138;UBERON:0005256!7.53e-14!143;UBERON:0004111!6.87e-13!241;UBERON:0001048!7.23e-13!168;UBERON:0004872!8.49e-13!84;UBERON:0000475!9.70e-12!365;UBERON:0005177!1.84e-11!107;UBERON:0000025!1.89e-11!194;UBERON:0002049!3.01e-11!79;UBERON:0007798!3.01e-11!79;UBERON:0000468!3.61e-11!659;UBERON:0002113!1.46e-10!27;UBERON:0003918!1.46e-10!27;UBERON:0005095!1.46e-10!27;UBERON:0007687!1.46e-10!27;UBERON:0004876!2.13e-10!20;UBERON:0000055!4.04e-10!69;UBERON:0004211!4.95e-10!16;UBERON:0001285!4.95e-10!16;UBERON:0007684!4.95e-10!16;UBERON:0003220!4.95e-10!16;UBERON:0004208!4.95e-10!16;UBERON:0006914!5.29e-10!25;UBERON:0006555!5.68e-10!17;UBERON:0005103!5.68e-10!17;UBERON:0000083!5.68e-10!17;UBERON:0009201!5.68e-10!17;UBERON:0004819!5.68e-10!17;UBERON:0006553!5.68e-10!17;UBERON:0003074!5.68e-10!17;UBERON:0003060!5.68e-10!17;UBERON:0005172!6.02e-10!55;UBERON:0005173!6.02e-10!55;UBERON:0000487!6.38e-10!22;UBERON:0001986!9.76e-10!18;UBERON:0004638!9.76e-10!18;UBERON:0004852!9.76e-10!18;UBERON:0001981!2.17e-09!60;UBERON:0007500!2.17e-09!60;UBERON:0004537!2.17e-09!60;UBERON:0006965!2.17e-09!60;UBERON:0000080!2.43e-09!18;UBERON:0002120!2.43e-09!18;UBERON:0004875!2.43e-09!18;UBERON:0005721!2.43e-09!18;UBERON:0005754!2.43e-09!18;UBERON:0007297!2.43e-09!18;UBERON:0000489!4.09e-09!32;UBERON:0000467!7.85e-09!625;UBERON:0001009!8.66e-09!113;UBERON:0000466!9.86e-09!126;UBERON:0000480!1.37e-08!626;UBERON:0009569!1.53e-08!113;UBERON:0003887!1.67e-08!21;UBERON:0002417!2.73e-08!61;UBERON:0000916!2.73e-08!61;UBERON:0000922!2.88e-08!612;UBERON:0001225!3.28e-08!13;UBERON:0008987!3.28e-08!13;UBERON:0003064!5.47e-08!37;UBERON:0000353!6.08e-08!17;UBERON:0000058!6.54e-08!26;UBERON:0004535!6.92e-08!110;UBERON:0001008!1.28e-07!45;UBERON:0009773!1.34e-07!12;UBERON:0001231!1.34e-07!12;UBERON:0004810!1.34e-07!12;UBERON:0000926!2.15e-07!448;UBERON:0004120!2.15e-07!448;UBERON:0006603!2.15e-07!448;UBERON:0006554!3.11e-07!44;UBERON:0000077!3.29e-07!130;UBERON:0000464!3.72e-07!104;UBERON:0007100!3.97e-07!27;UBERON:0001851!5.11e-07!16;UBERON:0004290!5.51e-07!70;UBERON:0000923!5.70e-07!604;UBERON:0005291!5.70e-07!604;UBERON:0006598!5.70e-07!604;UBERON:0002532!5.70e-07!604;UBERON:0002050!6.28e-07!605;UBERON:0005423!6.28e-07!605;UBERON:0000064!6.32e-07!219;UBERON:0004921!6.92e-07!129;UBERON:0004185!6.92e-07!129;UBERON:0001007!7.69e-07!155;UBERON:0001555!7.69e-07!155;UBERON:0007026!7.69e-07!155;UBERON:0001041!8.47e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;4.21e-11;24!UBERON:0011143;4.21e-11;24!UBERON:0006555;1.53e-10;15!UBERON:0004819;1.53e-10;15!UBERON:0001285;1.53e-10;15!UBERON:0007684;1.53e-10;15!UBERON:0006914;3.95e-10;25!UBERON:0000487;4.61e-10;22!UBERON:0004638;5.03e-10;18!UBERON:0001986;5.03e-10;18!UBERON:0004852;5.03e-10;18!UBERON:0000489;2.81e-09;29!UBERON:0001225;1.21e-08;12!UBERON:0008987;1.21e-08;12!UBERON:0000490;1.26e-08;33!UBERON:0000353;2.02e-08;15!UBERON:0006554;7.60e-08;30!UBERON:0001008;7.60e-08;30!UBERON:0003103;1.09e-07;61!UBERON:0004211;1.77e-07;10!UBERON:0009773;1.77e-07;10!UBERON:0001231;1.77e-07;10!UBERON:0004810;1.77e-07;10!UBERON:0001851;2.39e-07;15!UBERON:0003914;8.28e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.96e-20,117;UBERON:0000119,1.63e-18,309;UBERON:0000483,1.79e-17,306;UBERON:0003104,2.51e-17,160;UBERON:0009142,2.51e-17,160;UBERON:0003103,5.52e-17,68;UBERON:0002100,1.78e-16,199;UBERON:0000490,1.15e-14,148;UBERON:0004872,1.85e-12,83;UBERON:0005177,2.13e-12,101;UBERON:0001048,1.54e-11,160;UBERON:0004111,3.33e-11,240;UBERON:0005256,6.24e-11,122;UBERON:0002113,6.59e-11,26;UBERON:0003918,6.59e-11,26;UBERON:0011143,6.59e-11,26;UBERON:0005095,6.59e-11,26;UBERON:0007687,6.59e-11,26;UBERON:0002049,7.67e-11,78;UBERON:0007798,7.67e-11,78;UBERON:0004211,1.54e-10,15;UBERON:0009773,1.54e-10,15;UBERON:0001231,1.54e-10,15;UBERON:0001285,1.54e-10,15;UBERON:0007684,1.54e-10,15;UBERON:0004208,1.54e-10,15;UBERON:0006555,1.90e-10,16;UBERON:0004819,1.90e-10,16;UBERON:0006914,3.60e-10,25;UBERON:0005172,3.67e-10,54;UBERON:0005173,3.67e-10,54;UBERON:0000487,4.36e-10,22;UBERON:0004638,6.73e-10,18;UBERON:0001986,6.73e-10,18;UBERON:0004852,6.73e-10,18;UBERON:0000055,9.40e-10,68;UBERON:0000025,1.09e-09,192;UBERON:0007503,2.29e-09,78;UBERON:0000489,3.76e-09,31;UBERON:0007500,6.10e-09,59;UBERON:0001981,6.10e-09,59;UBERON:0004537,6.10e-09,59;UBERON:0006965,6.10e-09,59;UBERON:0001009,7.12e-09,112;UBERON:0001225,1.12e-08,12;UBERON:0008987,1.12e-08,12;UBERON:0009569,1.52e-08,112;UBERON:0000353,1.95e-08,15;UBERON:0002417,2.42e-08,60;UBERON:0000916,2.42e-08,60;UBERON:0004535,5.93e-08,109;UBERON:0004810,1.77e-07,10;UBERON:0001851,2.59e-07,15;UBERON:0007100,3.08e-07,27;UBERON:0001008,4.08e-07,48;UBERON:0006554,9.60e-07,47 | |||
|phase1_expression=1.2717486548939,2.14100523890983,1.83240725324762,0,0.893922188854576,1.74467704820074,0,1.26343974685366,1.04474251279935,4.66894479352867,15.3516256953934,2.18441372130172,2.37390280405608,2.59909341216098,3.31397375727916,2.6893005858071,2.41077811209591,3.65155045193687,4.39139518911456,7.63350560076085,11.4240387096782,9.40364164434263,2.86235987131057,4.65373045247806,5.77496142136093,0.0764134057479513,0,0,0,0,0,1.83884244895785,6.32532429434325,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,10.0605128955545,6.39312809217652,5.06014813338393,7.01873074890245,3.91085601194224,2.3858578411533,9.73269740605272,2.74150969775797,4.21285855178871,3.33772185633879,3.99486180268024,2.18577172975525,2.59549109949101,0,0.348259474598534,0.132957960518865,0,0,0,13.3170812935692,10.3228151412735,12.1499175562658,10.7408508965562,10.9069853414576,8.52865930014209,14.8386426241136,4.13466814670926,3.5576626268671,1.33888245105868,8.05658634218294,10.6438094800592,5.12530320851156,12.8682078121054,4.0507097394088,7.9476758172831,12.5736448670655,13.288154697032,7.66583187329416,11.3911879148175,9.34328894045077,0,0,3.05265836499774,6.46063537203914,6.71141711822273,2.25095607382472,6.88407889797153,4.25602058638028,8.97084160227691,8.5399196583764,7.15335890409764,3.11211035399766,8.21735099625097,13.5673379584171,3.02714855289863,2.30470369792,9.84150013701946,2.18512053781224,3.99330275081114,3.13842229158782,3.87533845524424,2.91371299862637,5.89893388149444,2.44985005505872,2.7023549808589,1.34323515528495,2.37600571456411,2.22540236350701,1.82032272387605,8.62341770179486,1.0100166837244,3.00284447692714,0.554128230968366,4.82875382968922,3.98434134538726,2.25357088359895,6.69249880644124,3.22901344239952,2.13557388818567,1.05965950579781,3.30100205692843,1.95799805553034,2.06112432036503,2.41951913231067,1.85653965465393,3.50773218580315,4.79624171063818,2.02509777013059,1.45481451136931,1.06502877754984,2.01504196455281,7.12154487704048,1.35282597214308,1.90922284413584,0.286804595389004,8.53815942907168,8.0843158676106,10.6898427439957,7.3599349060913,9.08355063152262,3.28479623168247,1.56449532329816,15.4377825166292,11.0507937081984,1.39310378409594,1.44375896333917,8.39978280282892,8.76640388406129,7.71235295627142,10.5882213823098,10.6760927605279,9.72809538355496,7.14605933248871,5.29797955838434,8.0796902958742,10.3341763647451,12.6217596423101,5.7620361586396,13.2307840246988,1.26755034821831,4.91413608338813,2.36315962672562,0,1.72183813960359,3.60292401626904,1.20725313949488,6.74410519545717,1.60846355858609,1.574003567695,6.51616610620649,5.19967392639789,5.77325368101093,1.62302566965108,3.52226082707465,9.81691844775302,17.1304639653346,12.5567740474835,1.58040879591855,0.858486162094873,0.246217006087397,0,0,2.81201501960331,0.503946384596579,2.69372684760534,2.32852159027406,1.74380363108377,5.75074018747817,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.952468414382536,2.67391897890794,0,1.71072446022705,1.64523988325318,3.00343057843917,0.857479297891735,15.4740896396598,7.41132117016576,8.14054972612545,1.80980402060889,0,4.22651376278,1.32969058292435,0,4.37252536245642,4.25547396069835,2.93064396917709,4.43231780340257,0.542621605391443,2.46972101034231,4.88604276440603,2.13235169245527,3.16780749173372,0.904318131178758,0,1.3996218765488,0,0,0,7.42837052023906,8.04033550838797,4.27910715122155,1.73737568001095,2.67119219315498,1.25342674267927,0,0,0,0,1.52456774533478,1.30139853857622,7.73288812777695,1.34013012267479,3.82763250991898,0,0,0,2.57652132610194,5.00170521059677,3.52644530809656,7.48695101510906,8.20773348466944,6.15039418632345,5.15422225967938,2.10662269809403,2.27407504055985,10.3473071292505,5.31380478828349,6.45292089895961,2.86715927744673,7.83204629850962,15.0983106476777,0,0,0,3.63753085735511,3.32870879020994,3.0239029332968,1.73675465473144,3.06923946576125,3.36792113319688,1.40953064181271,1.53512174720011,3.37793234401576,7.42090332224955,4.78050050788232,6.21466038595945,6.07740954502188,1.55776328755086,6.39157081529776,5.68039413080624,0.40101294060657,0.552485933615378,5.51109351190112,2.36718518408732,4.72047893853927,20.7551821937409,5.77615028283111,36.8644391513122,33.61202167025,10.1329563737161,14.7853399292166,11.9065593693561,11.8753753856177,24.6763604304463,18.9662506280697,33.1115250744203,18.3510916592428,10.8039881160734,27.3127200761058,0,0,4.87255237721139,7.87235149679294,3.57916234130733,4.84292754744295,1.09883357782012,0.990113999047056,3.44559322797703,1.30012049207304,12.8547143875328,12.9538762511443,5.23765298189791,7.06116903740196,5.51346289938122,2.79292636657511,3.77043404176994,8.77834262385839,15.6696382738258,2.80984356113663,1.34533047155574,2.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| |||
|short_description=p2@TEAD4 | |||
}} |
Latest revision as of 02:37, 18 September 2015
Short description: | p2@TEAD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TEAD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397122, ENST00000443986_5end |
EntrezGene: | TEAD4 |
HGNC: | 11717 |
UniProt: | Q6MZR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.62e-22 | 253 |
embryonic cell | 1.86e-19 | 250 |
mesodermal cell | 1.60e-16 | 121 |
lining cell | 3.24e-13 | 58 |
barrier cell | 3.24e-13 | 58 |
meso-epithelial cell | 5.22e-13 | 45 |
endothelial cell | 3.71e-12 | 36 |
kidney cell | 2.49e-11 | 17 |
kidney epithelial cell | 2.49e-11 | 17 |
endothelial cell of vascular tree | 8.73e-11 | 24 |
epithelial cell of nephron | 1.54e-10 | 15 |
blood vessel endothelial cell | 6.73e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.73e-10 | 18 |
kidney cortical cell | 1.12e-08 | 12 |
renal cortical epithelial cell | 1.12e-08 | 12 |
squamous epithelial cell | 7.23e-08 | 63 |
kidney tubule cell | 1.77e-07 | 10 |
nephron tubule epithelial cell | 1.77e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.69e-09 | 143 |
carcinoma | 8.46e-09 | 106 |