FFCP PHASE1:Hg19::chr6:32407643..32407695,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3122 | |EntrezGene=3122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4947 | |HGNC=4947 | ||
|TSSclassifier=strong | |||
|UniProt=Q30118 | |UniProt=Q30118 | ||
|association_with_transcript=0bp_to_ENST00000374982,ENST00000462200,uc003obh.2,uc003obi.2_5end | |association_with_transcript=0bp_to_ENST00000374982,ENST00000462200,uc003obh.2,uc003obi.2_5end | ||
|cluster_id=chr6:32407643..32407695,+ | |||
|coexpression_cluster_id=C187 | |||
|description=CAGE_peak_1_at_HLA-DRA_5end | |description=CAGE_peak_1_at_HLA-DRA_5end | ||
|id=chr6:32407643..32407695,+ | |id=chr6:32407643..32407695,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.57e-54!140;CL:0000037!6.37e-51!172;CL:0000566!6.37e-51!172;CL:0002087!4.98e-49!119;CL:0002032!3.13e-48!165;CL:0000837!3.13e-48!165;CL:0000988!7.17e-48!182;CL:0002031!1.82e-46!124;CL:0002009!5.59e-32!65;CL:0000766!6.09e-31!76;CL:0002194!1.72e-30!63;CL:0000576!1.72e-30!63;CL:0000040!1.72e-30!63;CL:0000559!1.72e-30!63;CL:0000557!3.79e-30!71;CL:0000763!1.19e-29!112;CL:0000049!1.19e-29!112;CL:0000839!4.13e-28!70;CL:0002057!1.63e-27!42;CL:0000860!5.96e-25!45;CL:0000542!2.42e-16!53;CL:0000051!2.42e-16!53;CL:0000838!6.49e-16!52;CL:0000945!1.17e-14!24;CL:0000826!1.17e-14!24;CL:0000236!3.03e-10!14;CL:0000451!6.62e-09!10;CL:0000990!7.60e-08!8 | |ontology_enrichment_celltype=CL:0000738!1.57e-54!140;CL:0000037!6.37e-51!172;CL:0000566!6.37e-51!172;CL:0002087!4.98e-49!119;CL:0002032!3.13e-48!165;CL:0000837!3.13e-48!165;CL:0000988!7.17e-48!182;CL:0002031!1.82e-46!124;CL:0002009!5.59e-32!65;CL:0000766!6.09e-31!76;CL:0002194!1.72e-30!63;CL:0000576!1.72e-30!63;CL:0000040!1.72e-30!63;CL:0000559!1.72e-30!63;CL:0000557!3.79e-30!71;CL:0000763!1.19e-29!112;CL:0000049!1.19e-29!112;CL:0000839!4.13e-28!70;CL:0002057!1.63e-27!42;CL:0000860!5.96e-25!45;CL:0000542!2.42e-16!53;CL:0000051!2.42e-16!53;CL:0000838!6.49e-16!52;CL:0000945!1.17e-14!24;CL:0000826!1.17e-14!24;CL:0000236!3.03e-10!14;CL:0000451!6.62e-09!10;CL:0000990!7.60e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.92e-22;33!CL:0002057;8.92e-22;33!CL:0000473;2.03e-21;39!CL:0000234;2.03e-21;39!CL:0000576;1.03e-19;48!CL:0000945;1.05e-15;24!CL:0002087;2.03e-15;104!CL:0000766;6.34e-15;69!CL:0000738;2.59e-13;136!CL:0000542;1.12e-10;53!CL:0000236;2.20e-10;13!CL:0000763;7.86e-10;100!CL:0000988;1.68e-09;177!CL:0000451;1.72e-09;10!CL:0000990;2.39e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.74e-61,136;CL:0000037,3.20e-57,168;CL:0002087,2.31e-55,115;CL:0000988,2.78e-54,177;CL:0002032,3.53e-54,161;CL:0000837,3.53e-54,161;CL:0002031,3.68e-52,120;CL:0002009,1.27e-37,61;CL:0002194,5.65e-36,59;CL:0000576,5.65e-36,59;CL:0000040,5.65e-36,59;CL:0000559,5.65e-36,59;CL:0000766,9.01e-36,72;CL:0000557,5.16e-35,67;CL:0000763,4.16e-34,108;CL:0000049,4.16e-34,108;CL:0000473,1.82e-33,48;CL:0000234,1.82e-33,48;CL:0000839,1.08e-32,66;CL:0000860,1.37e-29,42;CL:0002057,1.37e-29,42;CL:0000542,2.09e-17,53;CL:0000051,2.09e-17,53;CL:0000838,6.08e-17,52;CL:0000945,1.05e-15,24;CL:0000826,1.05e-15,24;CL:0000236,6.15e-11,14;CL:0000451,1.72e-09,10;CL:0000990,2.39e-08,8;CL:0000134,1.39e-07,354;CL:0002393,4.15e-07,9;CL:0002397,4.15e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-21;42!CL:0000051;1.12e-10;53!CL:0000049;6.85e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.51e-38!102;UBERON:0003061!2.51e-38!102;UBERON:0002193!2.02e-33!112;UBERON:0007023!3.15e-30!115;UBERON:0002371!1.21e-28!80;UBERON:0001474!9.95e-24!86;UBERON:0002405!1.18e-20!115;UBERON:0004765!8.39e-18!101;UBERON:0001434!8.39e-18!101;UBERON:0001049!4.52e-11!57;UBERON:0005068!4.52e-11!57;UBERON:0006241!4.52e-11!57;UBERON:0007135!4.52e-11!57;UBERON:0003080!2.78e-08!42;UBERON:0002616!3.70e-08!59;UBERON:0002780!3.90e-08!41;UBERON:0001890!3.90e-08!41;UBERON:0006240!3.90e-08!41;UBERON:0000178!7.58e-08!15;UBERON:0000179!7.58e-08!15;UBERON:0000463!7.58e-08!15;UBERON:0001017!8.14e-08!82;UBERON:0005743!4.70e-07!86;UBERON:0002020!9.52e-07!34;UBERON:0003528!9.52e-07!34 | |ontology_enrichment_uberon=UBERON:0002390!2.51e-38!102;UBERON:0003061!2.51e-38!102;UBERON:0002193!2.02e-33!112;UBERON:0007023!3.15e-30!115;UBERON:0002371!1.21e-28!80;UBERON:0001474!9.95e-24!86;UBERON:0002405!1.18e-20!115;UBERON:0004765!8.39e-18!101;UBERON:0001434!8.39e-18!101;UBERON:0001049!4.52e-11!57;UBERON:0005068!4.52e-11!57;UBERON:0006241!4.52e-11!57;UBERON:0007135!4.52e-11!57;UBERON:0003080!2.78e-08!42;UBERON:0002616!3.70e-08!59;UBERON:0002780!3.90e-08!41;UBERON:0001890!3.90e-08!41;UBERON:0006240!3.90e-08!41;UBERON:0000178!7.58e-08!15;UBERON:0000179!7.58e-08!15;UBERON:0000463!7.58e-08!15;UBERON:0001017!8.14e-08!82;UBERON:0005743!4.70e-07!86;UBERON:0002020!9.52e-07!34;UBERON:0003528!9.52e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.46e-09;114!UBERON:0000178;2.38e-08;15!UBERON:0000179;2.38e-08;15!UBERON:0000463;2.38e-08;15!UBERON:0002390;2.07e-07;32 | |||
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| ||
|short_description=p1@HLA-DRA | |short_description=p1@HLA-DRA | ||
}} | }} |
Latest revision as of 02:51, 18 September 2015
Short description: | p1@HLA-DRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HLA-DRA_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | 0bp_to_ENST00000374982, ENST00000462200, uc003obh.2, uc003obi.2_5end |
EntrezGene: | HLA-DRA |
HGNC: | 4947 |
UniProt: | Q30118 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.53e-43 | 98 |
blood island | 8.53e-43 | 98 |
hemolymphoid system | 4.40e-37 | 108 |
adult organism | 2.39e-32 | 114 |
bone marrow | 2.70e-32 | 76 |
immune system | 1.52e-29 | 93 |
bone element | 2.72e-27 | 82 |
skeletal element | 8.07e-22 | 90 |
skeletal system | 4.50e-18 | 100 |
neural tube | 2.35e-11 | 56 |
neural rod | 2.35e-11 | 56 |
future spinal cord | 2.35e-11 | 56 |
neural keel | 2.35e-11 | 56 |
regional part of nervous system | 1.50e-10 | 53 |
regional part of brain | 1.50e-10 | 53 |
lateral plate mesoderm | 1.90e-09 | 203 |
regional part of forebrain | 1.16e-08 | 41 |
forebrain | 1.16e-08 | 41 |
anterior neural tube | 1.16e-08 | 41 |
future forebrain | 1.16e-08 | 41 |
blood | 2.38e-08 | 15 |
haemolymphatic fluid | 2.38e-08 | 15 |
organism substance | 2.38e-08 | 15 |
central nervous system | 4.43e-08 | 81 |
brain grey matter | 3.65e-07 | 34 |
gray matter | 3.65e-07 | 34 |
telencephalon | 4.77e-07 | 34 |