FFCP PHASE1:Hg19::chr2:171571909..171571920,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389058 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14529 | |||
|TSSclassifier=strong | |||
|UniProt=Q6BEB4 | |||
|association_with_transcript=48bp_to_ENST00000375281_5end | |||
|cluster_id=chr2:171571909..171571920,+ | |||
|coexpression_cluster_id=C258 | |||
|description=CAGE_peak_9_at_SP5_5end | |||
|id=chr2:171571909..171571920,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.09e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.10e-18;12!CL:0002253;5.01e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.10e-18,12;CL:0000223,5.09e-14,58;CL:0002253,5.02e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.78e-20;11!UBERON:0009497;5.14e-17;13!UBERON:0001041;7.95e-16;30!UBERON:0003104;1.78e-15;31!CL:0000223;1.57e-07;58 | |||
|ontology_enrichment_disease=DOID:305!8.74e-08!106;DOID:3493!5.32e-07!2;DOID:0050687!5.82e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.82e-27;2!DOID:0050619;1.31e-14;1!DOID:1357;1.31e-14;1!DOID:299;1.07e-08;25!DOID:1325;1.88e-08;7!DOID:3904;1.88e-08;7!DOID:0050615;5.31e-08;16!DOID:3910;5.94e-08;2!DOID:305;4.63e-07;106!DOID:3905;9.23e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.58e-27,2;DOID:0050619,1.23e-14,1;DOID:1357,1.23e-14,1;DOID:305,6.27e-14,106;DOID:0050687,5.48e-10,143;DOID:299,1.03e-08,25;DOID:1325,1.92e-08,7;DOID:3904,1.92e-08,7;DOID:0050615,5.31e-08,16;DOID:3910,5.37e-08,2;DOID:3905,9.37e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001007!2.03e-08!155;UBERON:0001555!2.03e-08!155;UBERON:0007026!2.03e-08!155;UBERON:0005911!2.17e-08!82;UBERON:0004921!1.97e-07!129;UBERON:0004185!1.97e-07!129;UBERON:0000077!2.41e-07!130;UBERON:0004119!3.94e-07!169;UBERON:0000925!3.94e-07!169;UBERON:0006595!3.94e-07!169;UBERON:0003929!6.38e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.31e-14;1!UBERON:0001825;1.31e-14;1!UBERON:0002107;9.86e-12;19!UBERON:0006925;9.86e-12;19!UBERON:0000945;1.80e-11;5!UBERON:0010039;1.80e-11;5!UBERON:0002423;5.68e-09;25!UBERON:0004903;5.94e-08;2!UBERON:0002173;5.94e-08;2!UBERON:0002186;5.94e-08;2!UBERON:0002365;6.30e-07;31!UBERON:0002330;6.30e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.23e-14,1;UBERON:0001825,1.23e-14,1;UBERON:0007499,1.59e-13,25;UBERON:0009856,5.27e-13,26;UBERON:0002107,9.86e-12,19;UBERON:0006925,9.86e-12,19;UBERON:0008836,9.86e-12,19;UBERON:0008835,3.64e-10,22;UBERON:0003894,3.64e-10,22;UBERON:0004921,4.79e-10,118;UBERON:0009854,9.84e-10,23;UBERON:0005911,1.16e-09,82;UBERON:0001041,4.79e-09,87;UBERON:0009497,5.69e-09,25;UBERON:0000015,5.69e-09,25;UBERON:0002423,5.69e-09,25;UBERON:0006235,5.69e-09,25;UBERON:0004161,5.69e-09,25;UBERON:0003929,1.15e-08,54;UBERON:0004903,5.37e-08,2;UBERON:0002173,5.37e-08,2;UBERON:0002186,5.37e-08,2;UBERON:0001007,5.75e-08,145;UBERON:0001555,5.75e-08,145;UBERON:0007026,5.75e-08,145;UBERON:0000945,1.76e-07,8;UBERON:0010039,1.76e-07,8;UBERON:0002365,2.85e-07,31;UBERON:0002330,2.85e-07,31;UBERON:0004119,4.14e-07,160;UBERON:0000925,4.14e-07,160;UBERON:0006595,4.14e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,1.49712432326576,0,0,0,2.84136146806413,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8165329287164,0,0,0.0884575645033392,0,0,0.123563938946503,0.208843899010911,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0.229073192331831,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82479747637269,5.987521855349,5.76911008668165,5.52709059604316,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,2.51286554000375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0.463044948647668,0,0.179088841081487,0,0.657852148736121,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0.163771917510097,0.443568258651136,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25745537315059,1.82876887473404,0,0,4.6392577253528,0.485710993059139,0,0,0,1.24240690242856,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0.473314686579554,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.109265571963696,2.4072715192173,0,0,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p9@SP5 | |||
}} |
Latest revision as of 03:17, 18 September 2015
Short description: | p9@SP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SP5_5end |
Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
Association with transcript: | 48bp_to_ENST00000375281_5end |
EntrezGene: | SP5 |
HGNC: | 14529 |
UniProt: | Q6BEB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.10e-18 | 12 |
endodermal cell | 5.09e-14 | 58 |
epithelial cell of large intestine | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.23e-14 | 1 |
paranasal sinus | 1.23e-14 | 1 |
epithelial sac | 1.59e-13 | 25 |
sac | 5.27e-13 | 26 |
liver | 9.86e-12 | 19 |
digestive gland | 9.86e-12 | 19 |
liver bud | 9.86e-12 | 19 |
hepatic diverticulum | 3.64e-10 | 22 |
liver primordium | 3.64e-10 | 22 |
subdivision of digestive tract | 4.79e-10 | 118 |
digestive tract diverticulum | 9.84e-10 | 23 |
endo-epithelium | 1.16e-09 | 82 |
foregut | 4.79e-09 | 87 |
epithelium of foregut-midgut junction | 5.69e-09 | 25 |
anatomical boundary | 5.69e-09 | 25 |
hepatobiliary system | 5.69e-09 | 25 |
foregut-midgut junction | 5.69e-09 | 25 |
septum transversum | 5.69e-09 | 25 |
gut epithelium | 1.15e-08 | 54 |
bronchoalveolar duct junction | 5.37e-08 | 2 |
alveolar duct | 5.37e-08 | 2 |
bronchiole | 5.37e-08 | 2 |
digestive system | 5.75e-08 | 145 |
digestive tract | 5.75e-08 | 145 |
primitive gut | 5.75e-08 | 145 |
stomach | 1.76e-07 | 8 |
food storage organ | 1.76e-07 | 8 |
exocrine gland | 2.85e-07 | 31 |
exocrine system | 2.85e-07 | 31 |
endoderm-derived structure | 4.14e-07 | 160 |
endoderm | 4.14e-07 | 160 |
presumptive endoderm | 4.14e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.58e-27 | 2 |
paranasal sinus cancer | 1.23e-14 | 1 |
maxillary sinus cancer | 1.23e-14 | 1 |
carcinoma | 6.27e-14 | 106 |
cell type cancer | 5.48e-10 | 143 |
adenocarcinoma | 1.03e-08 | 25 |
bronchus cancer | 1.92e-08 | 7 |
bronchogenic carcinoma | 1.92e-08 | 7 |
respiratory system cancer | 5.31e-08 | 16 |
lung adenocarcinoma | 5.37e-08 | 2 |
lung carcinoma | 9.37e-07 | 9 |