FFCP PHASE1:Hg19::chr6:32610515..32610535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3117 | |EntrezGene=3117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4942 | |HGNC=4942 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=128bp_to_uc003obu.2_5end | |association_with_transcript=128bp_to_uc003obu.2_5end | ||
|cluster_id=chr6:32610515..32610535,+ | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_16_at_HLA-DQA1_5end | |description=CAGE_peak_16_at_HLA-DQA1_5end | ||
|id=chr6:32610515..32610535,+ | |id=chr6:32610515..32610535,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.02e-39!140;CL:0002031!2.40e-36!124;CL:0002009!1.18e-35!65;CL:0002087!1.98e-34!119;CL:0002194!6.07e-32!63;CL:0000576!6.07e-32!63;CL:0000040!6.07e-32!63;CL:0000559!6.07e-32!63;CL:0000557!7.53e-32!71;CL:0002032!7.75e-30!165;CL:0000837!7.75e-30!165;CL:0000988!1.52e-29!182;CL:0000037!2.05e-29!172;CL:0000566!2.05e-29!172;CL:0002057!4.03e-28!42;CL:0000839!7.14e-28!70;CL:0000766!8.95e-27!76;CL:0000860!8.80e-26!45;CL:0000990!1.65e-23!8;CL:0000451!5.57e-23!10;CL:0000763!1.62e-22!112;CL:0000049!1.62e-22!112;CL:0000840!8.09e-16!5;CL:0001029!8.09e-16!5;CL:0000453!1.43e-14!5;CL:0000945!1.23e-12!24;CL:0000826!1.23e-12!24;CL:0002393!4.66e-09!9;CL:0002397!4.66e-09!9;CL:0000134!1.03e-08!358;CL:0002320!2.72e-08!365;CL:0000838!2.48e-07!52;CL:0000542!3.95e-07!53;CL:0000051!3.95e-07!53;CL:0001014!7.73e-07!2;CL:0001016!7.73e-07!2;CL:0000219!7.96e-07!390 | |ontology_enrichment_celltype=CL:0000738!2.02e-39!140;CL:0002031!2.40e-36!124;CL:0002009!1.18e-35!65;CL:0002087!1.98e-34!119;CL:0002194!6.07e-32!63;CL:0000576!6.07e-32!63;CL:0000040!6.07e-32!63;CL:0000559!6.07e-32!63;CL:0000557!7.53e-32!71;CL:0002032!7.75e-30!165;CL:0000837!7.75e-30!165;CL:0000988!1.52e-29!182;CL:0000037!2.05e-29!172;CL:0000566!2.05e-29!172;CL:0002057!4.03e-28!42;CL:0000839!7.14e-28!70;CL:0000766!8.95e-27!76;CL:0000860!8.80e-26!45;CL:0000990!1.65e-23!8;CL:0000451!5.57e-23!10;CL:0000763!1.62e-22!112;CL:0000049!1.62e-22!112;CL:0000840!8.09e-16!5;CL:0001029!8.09e-16!5;CL:0000453!1.43e-14!5;CL:0000945!1.23e-12!24;CL:0000826!1.23e-12!24;CL:0002393!4.66e-09!9;CL:0002397!4.66e-09!9;CL:0000134!1.03e-08!358;CL:0002320!2.72e-08!365;CL:0000838!2.48e-07!52;CL:0000542!3.95e-07!53;CL:0000051!3.95e-07!53;CL:0001014!7.73e-07!2;CL:0001016!7.73e-07!2;CL:0000219!7.96e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.79e-63;5!CL:0000990;3.03e-35;8!CL:0000451;7.36e-29;10!CL:0001014;1.78e-26;2!CL:0001016;1.78e-26;2!CL:0000860;7.43e-10;33!CL:0002057;7.43e-10;33!CL:0000840;1.79e-09;5!CL:0000473;1.85e-09;39!CL:0000234;1.85e-09;39!CL:0000576;2.69e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.46e-63,5;CL:0000990,2.83e-35,8;CL:0000451,6.96e-29,10;CL:0001014,1.67e-26,2;CL:0001016,1.67e-26,2;CL:0000738,3.81e-16,136;CL:0002009,3.16e-15,61;CL:0000763,5.05e-15,108;CL:0000049,5.05e-15,108;CL:0000557,8.52e-14,67;CL:0002032,2.17e-13,161;CL:0000837,2.17e-13,161;CL:0000037,9.18e-13,168;CL:0000988,4.98e-12,177;CL:0002031,5.00e-11,120;CL:0002194,1.65e-09,59;CL:0000576,1.65e-09,59;CL:0000040,1.65e-09,59;CL:0000559,1.65e-09,59;CL:0000840,1.75e-09,5;CL:0001029,1.75e-09,5;CL:0000473,5.62e-09,48;CL:0000234,5.62e-09,48;CL:0000839,1.88e-08,66;CL:0000766,1.05e-07,72;CL:0002087,1.42e-07,115;CL:0000860,2.63e-07,42;CL:0002057,2.63e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.87e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.25e-13;1!DOID:0050177;1.25e-13;1!DOID:0050427;1.25e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.10e-13,1;DOID:0050177,1.10e-13,1;DOID:0050427,1.10e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.73e-33!102;UBERON:0003061!1.73e-33!102;UBERON:0002193!7.38e-33!112;UBERON:0002371!3.28e-27!80;UBERON:0002405!3.55e-25!115;UBERON:0001474!1.17e-24!86;UBERON:0004765!5.63e-21!101;UBERON:0001434!5.63e-21!101;UBERON:0003081!5.86e-13!216;UBERON:0002204!1.40e-10!167;UBERON:0002384!1.01e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.58e-12,76;UBERON:0002390,2.29e-11,98;UBERON:0003061,2.29e-11,98;UBERON:0001474,4.05e-11,82;UBERON:0002193,3.28e-10,108;UBERON:0004765,4.74e-10,90;UBERON:0002405,1.07e-09,93;UBERON:0001434,5.96e-09,100 | |||
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| ||
|short_description=p16@HLA-DQA1 | |short_description=p16@HLA-DQA1 | ||
}} | }} |
Latest revision as of 03:35, 18 September 2015
Short description: | p16@HLA-DQA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_HLA-DQA1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 128bp_to_uc003obu.2_5end |
EntrezGene: | HLA-DQA1 |
HGNC: | 4942 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.58e-12 | 76 |
hematopoietic system | 2.29e-11 | 98 |
blood island | 2.29e-11 | 98 |
bone element | 4.05e-11 | 82 |
hemolymphoid system | 3.28e-10 | 108 |
skeletal element | 4.74e-10 | 90 |
immune system | 1.07e-09 | 93 |
skeletal system | 5.96e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.10e-13 | 1 |
monogenic disease | 1.10e-13 | 1 |
xeroderma pigmentosum | 1.10e-13 | 1 |