FFCP PHASE1:Hg19::chr6:32709159..32709175,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3118 | |EntrezGene=3118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4943 | |HGNC=4943 | ||
|TSSclassifier=strong | |||
|UniProt=P01906 | |UniProt=P01906 | ||
|association_with_transcript=0bp_to_NM_020056,uc003obx.2_5end | |association_with_transcript=0bp_to_NM_020056,uc003obx.2_5end | ||
|cluster_id=chr6:32709159..32709175,+ | |||
|coexpression_cluster_id=C1932 | |||
|description=CAGE_peak_1_at_HLA-DQA2_5end | |description=CAGE_peak_1_at_HLA-DQA2_5end | ||
|id=chr6:32709159..32709175,+ | |id=chr6:32709159..32709175,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.41e-48!140;CL:0002087!1.70e-43!119;CL:0002031!1.21e-41!124;CL:0000037!1.19e-37!172;CL:0000566!1.19e-37!172;CL:0000988!4.64e-36!182;CL:0002032!8.82e-35!165;CL:0000837!8.82e-35!165;CL:0002009!6.73e-26!65;CL:0000557!1.21e-25!71;CL:0002194!3.00e-24!63;CL:0000576!3.00e-24!63;CL:0000040!3.00e-24!63;CL:0000559!3.00e-24!63;CL:0000766!6.37e-24!76;CL:0002057!2.73e-23!42;CL:0000839!4.01e-23!70;CL:0000860!2.57e-21!45;CL:0000763!7.70e-18!112;CL:0000049!7.70e-18!112;CL:0000542!1.64e-16!53;CL:0000051!1.64e-16!53;CL:0000838!5.23e-16!52;CL:0000945!1.49e-10!24;CL:0000826!1.49e-10!24;CL:0000451!7.64e-09!10;CL:0002393!5.78e-08!9;CL:0002397!5.78e-08!9;CL:0000990!1.80e-07!8;CL:0000236!6.67e-07!14 | |ontology_enrichment_celltype=CL:0000738!1.41e-48!140;CL:0002087!1.70e-43!119;CL:0002031!1.21e-41!124;CL:0000037!1.19e-37!172;CL:0000566!1.19e-37!172;CL:0000988!4.64e-36!182;CL:0002032!8.82e-35!165;CL:0000837!8.82e-35!165;CL:0002009!6.73e-26!65;CL:0000557!1.21e-25!71;CL:0002194!3.00e-24!63;CL:0000576!3.00e-24!63;CL:0000040!3.00e-24!63;CL:0000559!3.00e-24!63;CL:0000766!6.37e-24!76;CL:0002057!2.73e-23!42;CL:0000839!4.01e-23!70;CL:0000860!2.57e-21!45;CL:0000763!7.70e-18!112;CL:0000049!7.70e-18!112;CL:0000542!1.64e-16!53;CL:0000051!1.64e-16!53;CL:0000838!5.23e-16!52;CL:0000945!1.49e-10!24;CL:0000826!1.49e-10!24;CL:0000451!7.64e-09!10;CL:0002393!5.78e-08!9;CL:0002397!5.78e-08!9;CL:0000990!1.80e-07!8;CL:0000236!6.67e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.68e-14;39!CL:0000234;2.68e-14;39!CL:0000576;6.86e-14;48!CL:0002087;4.41e-13;104!CL:0000945;1.42e-12;24!CL:0000860;1.86e-12;33!CL:0002057;1.86e-12;33!CL:0000766;1.60e-11;69!CL:0000738;2.88e-11;136!CL:0000542;3.53e-10;53!CL:0000451;5.36e-09;10!CL:0000990;2.08e-07;8!CL:0000236;3.31e-07;13!CL:0002393;9.24e-07;6!CL:0002397;9.24e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.24e-52,136;CL:0002087,4.35e-46,115;CL:0002031,1.36e-43,120;CL:0000037,7.02e-39,168;CL:0000988,3.43e-38,177;CL:0002032,2.91e-36,161;CL:0000837,2.91e-36,161;CL:0002009,4.13e-27,61;CL:0000557,4.66e-27,67;CL:0000473,9.15e-26,48;CL:0000234,9.15e-26,48;CL:0002194,3.20e-25,59;CL:0000576,3.20e-25,59;CL:0000040,3.20e-25,59;CL:0000559,3.20e-25,59;CL:0000766,1.18e-24,72;CL:0000839,1.42e-23,66;CL:0000860,4.49e-21,42;CL:0002057,4.49e-21,42;CL:0000763,4.56e-18,108;CL:0000049,4.56e-18,108;CL:0000542,7.99e-18,53;CL:0000051,7.99e-18,53;CL:0000838,3.03e-17,52;CL:0000945,1.40e-12,24;CL:0000826,1.40e-12,24;CL:0002393,5.10e-09,9;CL:0002397,5.10e-09,9;CL:0000451,5.32e-09,10;CL:0000236,4.05e-08,14;CL:0000990,2.06e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.05e-16;42!CL:0000051;3.53e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.57e-36!115;UBERON:0002390!3.41e-34!102;UBERON:0003061!3.41e-34!102;UBERON:0002193!1.37e-30!112;UBERON:0002371!6.33e-22!80;UBERON:0002405!1.50e-19!115;UBERON:0001474!1.09e-18!86;UBERON:0004765!3.65e-14!101;UBERON:0001434!3.65e-14!101;UBERON:0000178!2.14e-09!15;UBERON:0000179!2.14e-09!15;UBERON:0000463!2.14e-09!15;UBERON:0001049!3.38e-08!57;UBERON:0005068!3.38e-08!57;UBERON:0006241!3.38e-08!57;UBERON:0007135!3.38e-08!57;UBERON:0003081!8.14e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.76e-09;15!UBERON:0000179;7.76e-09;15!UBERON:0000463;7.76e-09;15!UBERON:0007023;1.69e-08;114!UBERON:0002390;5.03e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.02e-35,98;UBERON:0003061,3.02e-35,98;UBERON:0002193,4.72e-32,108;UBERON:0007023,2.92e-27,114;UBERON:0002405,1.87e-24,93;UBERON:0002371,9.33e-23,76;UBERON:0001474,1.25e-19,82;UBERON:0004765,3.51e-16,90;UBERON:0001434,6.67e-14,100;UBERON:0003081,4.86e-11,203;UBERON:0000178,7.83e-09,15;UBERON:0000179,7.83e-09,15;UBERON:0000463,7.83e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8760304187157,0,0,0,0,0,4.07491137921514,0,0,0,231.074138981805,215.760349074457,190.243958435163,18.8814852887474,171.571740949454,46.5996531181389,0,0,0,0,66.9617085015755,0.587200878669695,130.188921004991,67.7840232449079,67.9244025340616,157.860409339147,14.8991086368731,125.954452573117,175.931868923273,41.9442297494578,0.485168122375632,253.347650227196,57.5635043230556,0.619412741790207,285.390853183573,39.1925880989524,0.236482229888585,280.278238438871,71.0033151942209,1.35426486594342,227.584988507009,58.9477284124947,0.449446968890169,303.941305124306,78.3066826065668,0,230.895910130701,43.2836137038941,0.852449501065388,335.481879854643,116.881356286375,1.86846674698672,214.566360129259,49.5408772499191,0.868755378820466,223.997815974346,153.203496570827,1.89877432464531,524.758131198863,119.058407980424,445.105304414282,127.043681826686,13.2155665700526,129.544822877847,101.464536771884,19.6927510427099,230.339497897203,109.11767156602,162.749306156115,199.250072865436,0,0,155.757911227665,168.56644256014,153.602654480194,285.744910492943,293.031357496098,271.031718740787,21.1474125726441,14.5732226375199,0.263384084775077,1.180258620683,3.53709686474248,0,0.501559486172034,1.30368906653436,0,1.94826728407911,85.7860518015837,22.0954430606128,5.09527957542329,46.0366568400527,3.0741916734162,14.6967062742662,0.493313713811028,1.65810010671509,0.869409257205157,0.889719378972363,0.267540828089713,0,5.09892042139048,1.91610246800961,0.34362744548263,7.33757106856558,11.4683549156675,16.9281698002669,12.3558765778289,0.150575119077773,0.127986611154418,18.7396089828519,16.1008531389931,18.8859439291841,17.338179917327,10.9650480271238,6.22744936696036,0,0,0,0,0,0,0,0.486634870302636,0,0,0.43917392846563,14.7351459934927,0,0,21.7446753748638,27.1642390186857,399.53867135919,0.238490624305342,96.0951450110615,118.494942924131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,2.12801029319014,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539325232640658,0,0,0,0,0,0,10.1404027857465,36.3646070170722,18.9052770138049,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,377.45067033198,7.72214074959484,126.931012594574,0,0,0,0,0,0,0,0,22.8060927094849,1.15295962733569,3.28230326908588,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,586.226622690538,45.2031382288914,215.050618272692,0,0,0,0,0,0,25.3312425425372,49.8487823310876,9.70324086867828,20.1498566959205,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,104.831389244304,56.5171206144776,58.2732465606806,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,16.2804798403401,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,2.64202544989913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2241754372918,0,0,0,0,0,1.26664581178598,0,0,0,0,1.34060455107157,0,16.4751651359364,0,0,0,0,70.5352176832715,53.5246044999663,33.0395368561014,0.238231775457789,0.411362273086194,75.8713774095479,78.3045583995266,46.0012602250677,0,0,0,32.3297524718751,0,0,0,0,4.40462351304443,0,0,0.561594356226918,0,0,0,0,1.76646882614069,22.8033669125884,40.0295463428907,0,0,0,0,0,0,0,0,0,0,0,7.61842532213849,0,83.4710948238313,0,1.43246690842614,0.593929361665277,0.307160702099232,13.9180670687282,0.562677665642051,0,4.44970460412251,0,25.5037424961369,7.73594963487214,0,0,98.4678443688556,0,0,0,0,5.42538731003135,62.2656040102043,0,1.93866549219044,2.04089815956073,0,0,0,2.17499872630438,0,0,0,0,0,0,7.97167247232455,0.361789315876224,3.05163472634166,0.110579259931225,0,4.38770794307945,0,0,34.8584671022201,0,0,0,0,5.74202087517455,2.83952539545773,75.1579034186275,0,0,0,0,0,0,0,0,0,0,0,0,16.9194528283346,10.8802804339107,100.208943769115,39.4373101145227,81.0579439489059,99.6185398282044,12.94101753229,8.02577647298789,3.98249557733077,49.2627930882298,0,0,0.394584402849391,32.6674933331392,0,49.9173979065055,1.65355761355942,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,2.81268147816416,0,15.3666903730762,0,0,1.58276989889697,0.195551382734803,1.44285876452761,133.835027701574,0,0.144090417154106,0,0,8.49923308130083,0,0.235694034616795,0,0,0.101998217636322,0,9.60672461935663,0.547621515567972,2.55493176133945,0.429765441419957,8.41239533693806,0,14.2079462887244,10.7680953686522,2.79550600698588,6.43839072204856,5.57928643604681,2.08268764708851,0,0,0,0,0,0,10.8381865044204,11.9284453471395,0.272406812223151,0,0,0,2205.64403277091,3807.87941837967,3.34122561619136,0,58.2374176941074,2.57027481861491,0,0,0,114.351252219739,5.95882773328889,0,0,0,0,0,0.492555124496034,0,0.226624183040251,15.2414323025206,10.6005511129777,7.88626033805458,0.66116300871345,0,0,230.23366149595,23.7378500700496,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| ||
|short_description=p1@HLA-DQA2 | |short_description=p1@HLA-DQA2 | ||
}} | }} |
Latest revision as of 03:53, 18 September 2015
Short description: | p1@HLA-DQA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HLA-DQA2_5end |
Coexpression cluster: | C1932_immature_migratory_Monocytederived_CD14_plasma_Dendritic_Macrophage |
Association with transcript: | 0bp_to_NM_020056, uc003obx.2_5end |
EntrezGene: | HLA-DQA2 |
HGNC: | 4943 |
UniProt: | P01906 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.02e-35 | 98 |
blood island | 3.02e-35 | 98 |
hemolymphoid system | 4.72e-32 | 108 |
adult organism | 2.92e-27 | 114 |
immune system | 1.87e-24 | 93 |
bone marrow | 9.33e-23 | 76 |
bone element | 1.25e-19 | 82 |
skeletal element | 3.51e-16 | 90 |
skeletal system | 6.67e-14 | 100 |
lateral plate mesoderm | 4.86e-11 | 203 |
blood | 7.83e-09 | 15 |
haemolymphatic fluid | 7.83e-09 | 15 |
organism substance | 7.83e-09 | 15 |