FFCP PHASE1:Hg19::chr17:78261857..78261869,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:78261857..78261869,+ to FFCP PHASE1:Hg19::chr17:78261857..78261869,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57674 | |EntrezGene=57674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14539 | |HGNC=14539 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=99bp_to_ENST00000559070_5end | |||
|cluster_id=chr17:78261857..78261869,+ | |||
|description=CAGE_peak_6_at_RNF213_5end | |||
|id=chr17:78261857..78261869,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.11e-18!140;CL:0002031!2.25e-17!124;CL:0002087!5.94e-17!119;CL:0000766!7.61e-15!76;CL:0000839!1.39e-13!70;CL:0000557!3.12e-13!71;CL:0000988!2.91e-12!182;CL:0002194!7.88e-12!63;CL:0000576!7.88e-12!63;CL:0000040!7.88e-12!63;CL:0000559!7.88e-12!63;CL:0002009!3.66e-11!65;CL:0000037!5.20e-11!172;CL:0000566!5.20e-11!172;CL:0002032!7.60e-11!165;CL:0000837!7.60e-11!165;CL:0002057!9.34e-11!42;CL:0000860!1.52e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0002619;4.31e-25;3!CL:0000576;3.30e-11;48!CL:0000473;3.38e-11;39!CL:0000234;3.38e-11;39!CL:0000766;9.17e-09;69!CL:0000860;1.44e-07;33!CL:0002057;1.44e-07;33!CL:0000775;1.82e-07;3!CL:0000346;2.79e-07;3!CL:1000428;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,3.38e-25,3;CL:0000766,2.14e-15,72;CL:0002194,2.03e-14,59;CL:0000576,2.03e-14,59;CL:0000040,2.03e-14,59;CL:0000559,2.03e-14,59;CL:0002009,6.05e-14,61;CL:0000839,6.99e-13,66;CL:0000557,1.09e-12,67;CL:0000763,3.73e-10,108;CL:0000049,3.73e-10,108;CL:0000473,1.88e-09,48;CL:0000234,1.88e-09,48;CL:0000738,5.74e-08,136;CL:0000775,1.82e-07,3;CL:0000346,2.63e-07,3;CL:1000428,2.63e-07,3;CL:0002087,2.78e-07,115;CL:0000860,3.36e-07,42;CL:0002057,3.36e-07,42;CL:0002031,5.78e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000049;2.56e-07;108!CL:0002057;2.69e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.90e-13!102;UBERON:0003061!7.90e-13!102;UBERON:0002193!1.31e-12!112;UBERON:0002371!5.57e-12!80;UBERON:0002405!7.53e-12!115;UBERON:0001474!2.37e-10!86;UBERON:0004765!9.32e-08!101;UBERON:0001434!9.32e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.95e-15;5!UBERON:0005057;1.95e-15;5!UBERON:0002370;1.80e-10;2!UBERON:0005058;1.80e-10;2!UBERON:0009113;1.80e-10;2!UBERON:0002106;2.79e-07;3!UBERON:0000412;2.79e-07;3!UBERON:0001992;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,5.92e-15,93;UBERON:0002390,3.59e-14,98;UBERON:0003061,3.59e-14,98;UBERON:0002193,8.09e-13,108;UBERON:0004177,3.14e-11,7;UBERON:0005057,3.14e-11,7;UBERON:0002371,3.62e-11,76;UBERON:0001474,2.46e-10,82;UBERON:0004765,2.15e-09,90;UBERON:0001434,2.00e-08,100;UBERON:0000412,2.63e-07,3;UBERON:0001992,2.63e-07,3;UBERON:0002106,3.35e-07,3;UBERON:0004854,3.35e-07,3;UBERON:0009034,3.35e-07,3;UBERON:0002095,3.35e-07,3;UBERON:0004782,3.35e-07,3;UBERON:0003281,3.35e-07,3;UBERON:0009664,3.35e-07,3;UBERON:0002296,3.35e-07,3;UBERON:0005602,3.35e-07,3;UBERON:0001179,3.35e-07,3;UBERON:0006293,3.35e-07,3 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,3.35873211359887,0.971680998056939,1.54545340580512,0,0,0.727752183563449,0,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0,0.689491361473237,1.29096936716765,1.35426486594342,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,2.63881040149373,1.59570926097305,0.852449501065388,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.300353785683013,0,0.570025487482497,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0.196709770113833,0,0,0.668745981562712,0,0,0,0.445641827540694,0,0,0,0.384273959177026,0.520237390239513,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0.309157587715317,0,0,0.168776332241266,0.194874010322397,0,0,0.646584227275248,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.44024217006613,0.829312462163088,0.288239906833923,0.6312121671319,0,0.763976851116555,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0.239624855491583,0,0,0,0,0,0,0.591092280605782,0.646882724578552,0.513372145118994,0,0,0,0,0,0.749007023947182,0,7.0450637284126,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0.431428401637234,0.960548020230999,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.334330152832435,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.246169610922139,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0.247127877893006,0.208843899010911,0,0,0,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0.160753148465019,0,0,0,0,0,0,0.551639951094387,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0.732761168390412,0,0,0,0,0,0.533937062838473,0,0,0.992332043623902,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0.470531639396343,0,0,0,0,0,0.189403005275089,0,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.225630985047772,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0.171488009437418,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0,1.12780701575824,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.606229585745915,0,0,0,0.213233981900981,0,2.19602293442421,0.248298857183432,0,0.25458863311266,0.202117188958219,0,0,0.202056159043763,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,3.35873211359887,0.971680998056939,1.54545340580512,0,0,0.727752183563449,0,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0,0.689491361473237,1.29096936716765,1.35426486594342,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,2.63881040149373,1.59570926097305,0.852449501065388,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.300353785683013,0,0.570025487482497,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0.196709770113833,0,0,0.668745981562712,0,0,0,0.445641827540694,0,0,0,0.384273959177026,0.520237390239513,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0.309157587715317,0,0,0.168776332241266,0.194874010322397,0,0,0.646584227275248,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.44024217006613,0.829312462163088,0.288239906833923,0.6312121671319,0,0.763976851116555,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0.239624855491583,0,0,0,0,0,0,0.591092280605782,0.646882724578552,0.513372145118994,0,0,0,0,0,0.749007023947182,0,7.0450637284126,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0.431428401637234,0.960548020230999,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.334330152832435,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.246169610922139,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0.247127877893006,0.208843899010911,0,0,0,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0.160753148465019,0,0,0,0,0,0,0.551639951094387,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0.732761168390412,0,0,0,0,0,0.533937062838473,0,0,0.992332043623902,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0.470531639396343,0,0,0,0,0,0.189403005275089,0,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.225630985047772,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0.171488009437418,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0,1.12780701575824,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.606229585745915,0,0,0,0.213233981900981,0,2.19602293442421,0.248298857183432,0,0.25458863311266,0.202117188958219,0,0,0.202056159043763,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@RNF213 | |||
}} | }} |
Latest revision as of 03:56, 18 September 2015
Short description: | p6@RNF213 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RNF213_5end |
Coexpression cluster: | NA |
Association with transcript: | 99bp_to_ENST00000559070_5end |
EntrezGene: | RNF213 |
HGNC: | 14539 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 3.38e-25 | 3 |
myeloid leukocyte | 2.14e-15 | 72 |
monopoietic cell | 2.03e-14 | 59 |
monocyte | 2.03e-14 | 59 |
monoblast | 2.03e-14 | 59 |
promonocyte | 2.03e-14 | 59 |
macrophage dendritic cell progenitor | 6.05e-14 | 61 |
myeloid lineage restricted progenitor cell | 6.99e-13 | 66 |
granulocyte monocyte progenitor cell | 1.09e-12 | 67 |
myeloid cell | 3.73e-10 | 108 |
common myeloid progenitor | 3.73e-10 | 108 |
defensive cell | 1.88e-09 | 48 |
phagocyte | 1.88e-09 | 48 |
leukocyte | 5.74e-08 | 136 |
neutrophil | 1.82e-07 | 3 |
hair follicle dermal papilla cell | 2.63e-07 | 3 |
stem cell of epidermis | 2.63e-07 | 3 |
nongranular leukocyte | 2.78e-07 | 115 |
classical monocyte | 3.36e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.36e-07 | 42 |
hematopoietic lineage restricted progenitor cell | 5.78e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
immune system | 5.92e-15 | 93 |
hematopoietic system | 3.59e-14 | 98 |
blood island | 3.59e-14 | 98 |
hemolymphoid system | 8.09e-13 | 108 |
hemopoietic organ | 3.14e-11 | 7 |
immune organ | 3.14e-11 | 7 |
bone marrow | 3.62e-11 | 76 |
bone element | 2.46e-10 | 82 |
skeletal element | 2.15e-09 | 90 |
skeletal system | 2.00e-08 | 100 |
dermal papilla | 2.63e-07 | 3 |
papillary layer of dermis | 2.63e-07 | 3 |
spleen | 3.35e-07 | 3 |
gastrointestinal system mesentery | 3.35e-07 | 3 |
stomach region | 3.35e-07 | 3 |
mesentery | 3.35e-07 | 3 |
gastrointestinal system serosa | 3.35e-07 | 3 |
mesentery of stomach | 3.35e-07 | 3 |
gut mesentery | 3.35e-07 | 3 |
dorsal mesentery | 3.35e-07 | 3 |
dorsal mesogastrium | 3.35e-07 | 3 |
peritoneal cavity | 3.35e-07 | 3 |
spleen primordium | 3.35e-07 | 3 |