FFCP PHASE1:Hg19::chr7:29233961..29233972,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |||
|TSSclassifier=strong | |||
|UniProt=P52757 | |||
|association_with_transcript=-55bp_to_ENST00000222792_5end | |||
|cluster_id=chr7:29233961..29233972,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_22_at_CHN2_5end | |||
|id=chr7:29233961..29233972,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.74e-08!5;CL:0000457!1.74e-08!5;CL:0002191!1.74e-08!5;CL:0000097!1.74e-08!5;CL:0000831!1.74e-08!5;CL:0002028!1.74e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002615;3.06e-12;3!CL:0000097;7.25e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.24e-12,3;CL:0000097,7.01e-08,5;CL:0002028,7.01e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.06e-99;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.63e-29!57;UBERON:0005068!1.63e-29!57;UBERON:0006241!1.63e-29!57;UBERON:0007135!1.63e-29!57;UBERON:0002616!5.15e-24!59;UBERON:0001017!1.14e-23!82;UBERON:0000955!3.39e-22!69;UBERON:0006238!3.39e-22!69;UBERON:0005743!3.71e-22!86;UBERON:0000073!4.68e-22!94;UBERON:0001016!4.68e-22!94;UBERON:0002346!1.67e-18!90;UBERON:0007023!3.19e-18!115;UBERON:0003075!3.27e-18!86;UBERON:0007284!3.27e-18!86;UBERON:0002780!2.14e-17!41;UBERON:0001890!2.14e-17!41;UBERON:0006240!2.14e-17!41;UBERON:0003080!7.27e-17!42;UBERON:0003076!4.51e-15!15;UBERON:0003057!4.51e-15!15;UBERON:0002020!1.91e-13!34;UBERON:0003528!1.91e-13!34;UBERON:0001893!2.07e-13!34;UBERON:0004733!1.92e-12!12;UBERON:0002028!1.92e-12!12;UBERON:0007277!1.92e-12!12;UBERON:0002791!3.54e-12!33;UBERON:0004732!2.31e-11!13;UBERON:0001950!5.46e-11!20;UBERON:0001869!1.42e-10!32;UBERON:0002298!1.59e-10!8;UBERON:0003056!4.24e-10!61;UBERON:0000153!5.08e-10!129;UBERON:0007811!5.08e-10!129;UBERON:0000033!5.43e-10!123;UBERON:0002619!7.96e-10!22;UBERON:0002680!8.81e-10!9;UBERON:0001895!8.81e-10!9;UBERON:0010092!8.81e-10!9;UBERON:0000924!1.85e-09!173;UBERON:0006601!1.85e-09!173;UBERON:0004121!4.22e-09!169;UBERON:0000025!5.11e-09!194;UBERON:0000956!2.01e-08!25;UBERON:0000203!2.01e-08!25;UBERON:0006331!2.85e-08!3;UBERON:0002021!8.92e-08!5;UBERON:0000988!1.28e-07!3;UBERON:0003688!4.57e-07!6;UBERON:0002358!4.57e-07!6;UBERON:0003684!4.57e-07!6;UBERON:0001178!4.57e-07!6;UBERON:0002308!5.71e-07!9;UBERON:0000125!5.71e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.84e-50;6!UBERON:0002680;8.87e-34;9!UBERON:0001895;8.87e-34;9!UBERON:0004733;1.41e-25;12!UBERON:0002028;1.41e-25;12!UBERON:0004732;1.11e-23;13!UBERON:0003688;9.23e-07;6!UBERON:0002358;9.23e-07;6!UBERON:0003684;9.23e-07;6!UBERON:0001178;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.84e-50,6;UBERON:0006215,3.84e-50,6;UBERON:0002680,8.87e-34,9;UBERON:0001895,8.87e-34,9;UBERON:0010092,8.87e-34,9;UBERON:0004733,1.41e-25,12;UBERON:0002028,1.41e-25,12;UBERON:0007277,1.41e-25,12;UBERON:0004732,1.11e-23,13;UBERON:0003076,1.20e-20,15;UBERON:0003057,1.20e-20,15;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6 | |||
|phase1_expression=0,0,0.704772020479856,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,1.03664057770386,0.288239906833923,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.457847324091717,0.577566499444116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,10.6807215421958,9.73097487394777,3.25102380848902,0.219385397153973,0,0,0,0.113942055847001,0,0.359030577639089,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.393915911536118,0.164831716762333,0.404421263125109,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0.554645257684261,0.248385611765534,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0.495743057036009,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0.177404740325278,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,2.98426162742052,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0.339957450954573,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p22@CHN2 | |||
}} |
Latest revision as of 04:00, 18 September 2015
Short description: | p22@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_CHN2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -55bp_to_ENST00000222792_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | P52757 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.24e-12 | 3 |
mast cell | 7.01e-08 | 5 |
basophil mast progenitor cell | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.84e-50 | 6 |
rhombic lip | 3.84e-50 | 6 |
regional part of metencephalon | 8.87e-34 | 9 |
metencephalon | 8.87e-34 | 9 |
future metencephalon | 8.87e-34 | 9 |
segmental subdivision of hindbrain | 1.41e-25 | 12 |
hindbrain | 1.41e-25 | 12 |
presumptive hindbrain | 1.41e-25 | 12 |
segmental subdivision of nervous system | 1.11e-23 | 13 |
posterior neural tube | 1.20e-20 | 15 |
chordal neural plate | 1.20e-20 | 15 |
omentum | 9.49e-07 | 6 |
peritoneum | 9.49e-07 | 6 |
abdominal cavity | 9.49e-07 | 6 |
visceral peritoneum | 9.49e-07 | 6 |