FFCP PHASE1:Hg19::chr8:38758640..38758708,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:38758640..38758708,+
|short_description=p2@PLEKHA2
|description=CAGE_peak_2_at_PLEKHA2_5end
|association_with_transcript=-44bp_to_ENST00000420274,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59339 | |EntrezGene=59339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14336 | |HGNC=14336 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HB19,E5RHB5,A8K727 | |UniProt=Q9HB19,E5RHB5,A8K727 | ||
|association_with_transcript=-44bp_to_ENST00000420274,ENST00000521746,NM_021623,uc003xmi.3,uc011lce.1_5end | |||
|cluster_id=chr8:38758640..38758708,+ | |||
|description=CAGE_peak_2_at_PLEKHA2_5end | |||
|id=chr8:38758640..38758708,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.65e-29!115;UBERON:0003075!2.17e-16!86;UBERON:0007284!2.17e-16!86;UBERON:0002346!8.03e-15!90;UBERON:0001049!2.71e-13!57;UBERON:0005068!2.71e-13!57;UBERON:0006241!2.71e-13!57;UBERON:0007135!2.71e-13!57;UBERON:0003056!2.93e-13!61;UBERON:0000955!3.72e-13!69;UBERON:0006238!3.72e-13!69;UBERON:0002616!3.81e-13!59;UBERON:0000153!1.49e-11!129;UBERON:0007811!1.49e-11!129;UBERON:0005743!1.65e-11!86;UBERON:0003080!2.87e-11!42;UBERON:0000033!4.34e-11!123;UBERON:0002780!5.99e-11!41;UBERON:0001890!5.99e-11!41;UBERON:0006240!5.99e-11!41;UBERON:0000073!2.00e-10!94;UBERON:0001016!2.00e-10!94;UBERON:0001017!2.66e-10!82;UBERON:0001893!1.35e-09!34;UBERON:0002020!2.41e-09!34;UBERON:0003528!2.41e-09!34;UBERON:0002791!3.05e-09!33;UBERON:0001869!5.63e-09!32;UBERON:0004121!1.94e-08!169;UBERON:0000924!8.52e-08!173;UBERON:0006601!8.52e-08!173;UBERON:0002619!2.55e-07!22;UBERON:0000062!2.68e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.42e-09;34!UBERON:0002780;1.30e-08;41!UBERON:0001890;1.30e-08;41!UBERON:0002791;1.80e-08;32!UBERON:0001869;2.06e-08;32!UBERON:0003528;2.29e-08;34!UBERON:0002020;2.29e-08;34!UBERON:0007023;1.08e-07;114!UBERON:0002619;1.51e-07;22!UBERON:0000073;2.87e-07;53!UBERON:0002616;2.87e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.02e-28,114;UBERON:0003075,1.26e-15,82;UBERON:0007284,1.26e-15,82;UBERON:0002346,4.23e-14,86;UBERON:0003056,3.06e-13,61;UBERON:0001049,6.20e-13,56;UBERON:0005068,6.20e-13,56;UBERON:0006241,6.20e-13,56;UBERON:0007135,6.20e-13,56;UBERON:0000955,7.04e-13,68;UBERON:0006238,7.04e-13,68;UBERON:0000073,6.17e-12,53;UBERON:0002616,6.17e-12,53;UBERON:0002780,5.39e-11,41;UBERON:0001890,5.39e-11,41;UBERON:0003080,5.39e-11,41;UBERON:0006240,5.39e-11,41;UBERON:0001017,3.96e-10,81;UBERON:0010371,4.75e-10,104;UBERON:0001893,1.24e-09,34;UBERON:0003528,2.22e-09,34;UBERON:0002020,2.22e-09,34;UBERON:0001016,3.40e-09,89;UBERON:0002791,4.83e-09,32;UBERON:0001869,5.20e-09,32;UBERON:0010314,4.73e-08,132;UBERON:0004121,9.30e-08,171;UBERON:0000924,9.30e-08,171;UBERON:0006601,9.30e-08,171;UBERON:0002619,2.41e-07,22;UBERON:0011216,5.79e-07,223 | |||
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| ||
|short_description=p2@PLEKHA2 | |||
}} | }} |
Latest revision as of 04:16, 18 September 2015
Short description: | p2@PLEKHA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLEKHA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_ENST00000420274, ENST00000521746, NM_021623, uc003xmi.3, uc011lce.1_5end |
EntrezGene: | PLEKHA2 |
HGNC: | 14336 |
UniProt: | Q9HB19E5RHB5A8K727 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.02e-28 | 114 |
neural plate | 1.26e-15 | 82 |
presumptive neural plate | 1.26e-15 | 82 |
neurectoderm | 4.23e-14 | 86 |
pre-chordal neural plate | 3.06e-13 | 61 |
neural tube | 6.20e-13 | 56 |
neural rod | 6.20e-13 | 56 |
future spinal cord | 6.20e-13 | 56 |
neural keel | 6.20e-13 | 56 |
brain | 7.04e-13 | 68 |
future brain | 7.04e-13 | 68 |
regional part of nervous system | 6.17e-12 | 53 |
regional part of brain | 6.17e-12 | 53 |
regional part of forebrain | 5.39e-11 | 41 |
forebrain | 5.39e-11 | 41 |
anterior neural tube | 5.39e-11 | 41 |
future forebrain | 5.39e-11 | 41 |
central nervous system | 3.96e-10 | 81 |
ecto-epithelium | 4.75e-10 | 104 |
telencephalon | 1.24e-09 | 34 |
brain grey matter | 2.22e-09 | 34 |
gray matter | 2.22e-09 | 34 |
nervous system | 3.40e-09 | 89 |
regional part of telencephalon | 4.83e-09 | 32 |
cerebral hemisphere | 5.20e-09 | 32 |
structure with developmental contribution from neural crest | 4.73e-08 | 132 |
ectoderm-derived structure | 9.30e-08 | 171 |
ectoderm | 9.30e-08 | 171 |
presumptive ectoderm | 9.30e-08 | 171 |
regional part of cerebral cortex | 2.41e-07 | 22 |
organ system subdivision | 5.79e-07 | 223 |