FFCP PHASE1:Hg19::chr6:32821599..32821615,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:32821599..32821615,-
|short_description=p4@TAP1
|description=CAGE_peak_4_at_TAP1_5end
|association_with_transcript=132bp_to_NM_000593,uc003ocg.2_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6890 | |EntrezGene=6890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=43 | |HGNC=43 | ||
|TSSclassifier=strong | |||
|UniProt=Q03518 | |UniProt=Q03518 | ||
|association_with_transcript=132bp_to_NM_000593,uc003ocg.2_5end | |||
|cluster_id=chr6:32821599..32821615,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_4_at_TAP1_5end | |||
|id=chr6:32821599..32821615,- | |||
|ontology_enrichment_celltype=CL:0000542!6.02e-31!53;CL:0000051!6.02e-31!53;CL:0000838!2.96e-30!52;CL:0002087!3.57e-28!119;CL:0000738!4.13e-27!140;CL:0002031!1.91e-24!124;CL:0000037!3.92e-22!172;CL:0000566!3.92e-22!172;CL:0000988!1.08e-20!182;CL:0002032!3.72e-20!165;CL:0000837!3.72e-20!165;CL:0000084!4.09e-17!25;CL:0000827!4.09e-17!25;CL:0000791!1.98e-16!18;CL:0000789!1.98e-16!18;CL:0002420!1.98e-16!18;CL:0002419!1.98e-16!18;CL:0000790!1.98e-16!18;CL:0000945!7.78e-12!24;CL:0000826!7.78e-12!24;CL:0000625!6.26e-11!11;CL:0000236!1.60e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.45e-42;18!CL:0000789;2.45e-42;18!CL:0002419;2.45e-42;18!CL:0000625;3.42e-30;11!CL:0000084;3.71e-29;25!CL:0000542;2.87e-25;53!CL:0000236;4.01e-19;13!CL:0000624;7.12e-12;6!CL:0000945;2.27e-11;24!CL:0000623;7.74e-10;3!CL:0000898;1.42e-09;3!CL:0000226;7.23e-09;3!CL:0000842;7.23e-09;3!CL:0002087;1.54e-08;104!CL:0000815;2.08e-07;2!CL:0000792;2.08e-07;2!CL:0002677;2.08e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.52e-44,52;CL:0000542,1.55e-43,53;CL:0000051,1.55e-43,53;CL:0000791,2.18e-42,18;CL:0000789,2.18e-42,18;CL:0002420,2.18e-42,18;CL:0002419,2.18e-42,18;CL:0000790,2.18e-42,18;CL:0000625,3.08e-30,11;CL:0000084,3.41e-29,25;CL:0000827,3.41e-29,25;CL:0002087,2.75e-23,115;CL:0000738,1.14e-20,136;CL:0000236,5.47e-18,14;CL:0002031,9.03e-18,120;CL:0000037,7.51e-15,168;CL:0000988,1.33e-13,177;CL:0002032,7.82e-13,161;CL:0000837,7.82e-13,161;CL:0000624,7.66e-12,6;CL:0000945,1.36e-11,24;CL:0000826,1.36e-11,24;CL:0000623,7.54e-10,3;CL:0000825,7.54e-10,3;CL:0000898,1.07e-09,3;CL:0000226,7.87e-09,3;CL:0000842,7.87e-09,3;CL:0000815,1.90e-07,2;CL:0000792,1.90e-07,2;CL:0002677,1.90e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.45e-42;18!CL:0000051;2.87e-25;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.12e-10!112;UBERON:0000178!9.87e-10!15;UBERON:0000179!9.87e-10!15;UBERON:0000463!9.87e-10!15;UBERON:0002390!1.07e-09!102;UBERON:0003061!1.07e-09!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.92e-20;15!UBERON:0000179;1.92e-20;15!UBERON:0000463;1.92e-20;15!UBERON:0002390;2.96e-09;32!UBERON:0002193;7.47e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.29e-20,15;UBERON:0000179,2.29e-20,15;UBERON:0000463,2.29e-20,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0,0,0.286235987131057,0,0,0.458480434487708,0.492603536699674,0.550975469195755,0.786728553697808,1.15148819429164,0.464448369948228,0,0,0,0.774672005803016,0,0.880801318004542,0.553995408531877,1.40381113229099,1.08505435357926,0.671746422719773,0.647787332037959,0,0.581592955118259,0,0,0.232429036905685,0.822335776043652,0,0,0.256160706529101,0.47296445977717,1.03423704220986,0,0,0,0,0,0.918251677112708,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0.425208599930087,0,0.22465726229299,0.300353785683013,0.32145117339416,0.570025487482497,0.79566670879636,0,1.75996244461323,2.18455444504853,1.77901850772711,2.98711155796555,4.00395987036012,4.02326707968138,2.64417949113945,1.90810750907073,0,1.76171156811282,2.6759125968766,2.64342657158052,0.560508562981536,0.526768169550154,0.983548850569165,3.14408610199332,1.23360899399706,5.51715434789238,5.86660079940463,6.15482147455153,3.89653456815823,2.89667187901451,7.36514768687093,5.31681347000691,4.87446954777028,4.09892223122161,4.42201781703586,1.31550323682941,1.38175008892924,1.44901542867526,5.04174314751005,3.21048993707656,7.31748666634838,1.47302145506836,1.53288197440768,4.12352934579156,2.02415753615602,7.00843911513013,3.90650072313851,4.75226022224187,3.91495309602209,3.19966527886046,3.74792179657038,3.31488152861624,4.10563998460523,2.41928091869679,2.40696176205157,2.02754165435919,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.458426764241994,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0.953962497221368,0.571994910780128,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0.213557388818567,0,0.600182192168805,0,0,0,0.506328996723799,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0.44024217006613,0,0.144119953416961,0.12624243342638,0,0.381988425558278,1.17217447210047,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0.179060963239896,1.45710687191585,4.53170748464433,5.17506179662842,3.46526197955321,0.254094624222463,0,0,0,0,0,0,1.24324654030811,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,3.3082884179662,1.2942852049117,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,0,0,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,1.05650146756755,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,1.52234282769651,3.82318603571188,3.41788312304498,3.57347663186684,6.9931586424653,3.24236655596359,1.08006287447623,2.37937552888281,0,0,0,0.929015875628594,0.432807638929335,0.284567373393656,0.478278818186467,0.399158742865633,0,0.211673582723883,0,0,0.456469358066384,0,0,0,0.321176150207399,0.201799707191048,0,0,0.614481528616916,0.671028323677248,0.500547425135725,0.19538809540204,0,0,0,0,0,0.18714054040822,0.293016358543788,0.121360521749513,0.445773537109913,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0.19924798825107,1.38141957765574,0,0.102268682502155,1.35393286007176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.0769502585037971,0.227884111694002,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0,0,0,0,0,0,0.353830258013357,0,0.296521128680622,0.123563938946503,0.208843899010911,0.202203398942031,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0.520679215005393,0.0979923974143777,0,0,0.343972064943233,0.0967563312890851,0.219267951258557,0.246346371159628,0.193978032976839,0,0,0,0,0.126621591911757,0,0.160317640503067,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0,0,0,0.525774708558629,0,0,0.717873024576814,0.199679000498991,0,0.446342914883745,0.0671834724867263,0,0,0,0.247247575143499,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0.533937062838473,0.157204305099666,0.828478110694391,3.47316215268366,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0.250381861413,0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| ||
|short_description=p4@TAP1 | |||
}} | }} |
Latest revision as of 04:18, 18 September 2015
Short description: | p4@TAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TAP1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 132bp_to_NM_000593, uc003ocg.2_5end |
EntrezGene: | TAP1 |
HGNC: | 43 |
UniProt: | Q03518 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.52e-44 | 52 |
lymphocyte | 1.55e-43 | 53 |
common lymphoid progenitor | 1.55e-43 | 53 |
mature alpha-beta T cell | 2.18e-42 | 18 |
alpha-beta T cell | 2.18e-42 | 18 |
immature T cell | 2.18e-42 | 18 |
mature T cell | 2.18e-42 | 18 |
immature alpha-beta T cell | 2.18e-42 | 18 |
CD8-positive, alpha-beta T cell | 3.08e-30 | 11 |
T cell | 3.41e-29 | 25 |
pro-T cell | 3.41e-29 | 25 |
nongranular leukocyte | 2.75e-23 | 115 |
leukocyte | 1.14e-20 | 136 |
B cell | 5.47e-18 | 14 |
hematopoietic lineage restricted progenitor cell | 9.03e-18 | 120 |
hematopoietic stem cell | 7.51e-15 | 168 |
hematopoietic cell | 1.33e-13 | 177 |
hematopoietic oligopotent progenitor cell | 7.82e-13 | 161 |
hematopoietic multipotent progenitor cell | 7.82e-13 | 161 |
CD4-positive, alpha-beta T cell | 7.66e-12 | 6 |
lymphocyte of B lineage | 1.36e-11 | 24 |
pro-B cell | 1.36e-11 | 24 |
natural killer cell | 7.54e-10 | 3 |
pro-NK cell | 7.54e-10 | 3 |
naive T cell | 1.07e-09 | 3 |
single nucleate cell | 7.87e-09 | 3 |
mononuclear cell | 7.87e-09 | 3 |
regulatory T cell | 1.90e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.90e-07 | 2 |
naive regulatory T cell | 1.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.29e-20 | 15 |
haemolymphatic fluid | 2.29e-20 | 15 |
organism substance | 2.29e-20 | 15 |