FFCP PHASE1:Hg19::chr6:33048483..33048496,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3113 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4938 | |||
|TSSclassifier=strong | |||
|UniProt=P20036 | |||
|association_with_transcript=0bp_to_ENST00000419277_5end | |||
|cluster_id=chr6:33048483..33048496,- | |||
|description=CAGE_peak_7_at_HLA-DPA1_5end | |||
|id=chr6:33048483..33048496,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;2.29e-14;3!CL:0002138;1.17e-07;6!CL:0002580;2.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.72e-14,3;CL:0005020,8.74e-08,6;CL:0002138,8.74e-08,6;CL:0005022,8.74e-08,6;CL:0002580,1.82e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;1.17e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.33e-18!115;UBERON:0000468!7.95e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;6.78e-11;4!UBERON:0001473;1.61e-09;8!UBERON:0004536;1.61e-09;8!UBERON:0006558;1.61e-09;8!UBERON:0002465;1.27e-07;10!UBERON:0000310;1.39e-07;10!UBERON:0001443;6.77e-07;11!UBERON:0003135;9.46e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,5.49e-11,4;UBERON:0004340,5.49e-11,4;UBERON:0003124,1.54e-10,7;UBERON:0004876,3.29e-10,11;UBERON:0001473,1.11e-09,8;UBERON:0004536,1.11e-09,8;UBERON:0006558,1.11e-09,8;UBERON:0003887,2.14e-09,12;UBERON:0000080,2.60e-08,9;UBERON:0002120,2.60e-08,9;UBERON:0004875,2.60e-08,9;UBERON:0005721,2.60e-08,9;UBERON:0005754,2.60e-08,9;UBERON:0007297,2.60e-08,9;UBERON:0002465,9.52e-08,10;UBERON:0001008,1.28e-07,48;UBERON:0000310,1.40e-07,10;UBERON:0001443,6.81e-07,11;UBERON:0003135,8.47e-07,11;UBERON:0002417,8.50e-07,60;UBERON:0000916,8.50e-07,60 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.587200878669695,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,2.02785126545153,0,0,0.283604451492204,0,0.175669571386252,0.654895377488563,1.09288586487763,0,0,0,0,0,0,0,0,0.860234595106124,0.694281003215189,0,0,0.550236083880135,0,0.516833518338658,0,0,1.61131726843659,0,0.976248230192678,0.367663080345869,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0,0.605429710579726,1.15235184896,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.245668634623536,0.309977343527296,0,0.247266929278557,0.910161361938026,1.43723628363248,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0.37223371266318,0,0.194874010322397,0,0,0.161646056818812,0.710019185033229,0.604512589365842,0.508681776931463,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,1.18157981336281,0,0,0.343135620597051,0,0,0.100528972411631,0,0,0,0,0,0,1.87676382089396,2.31492756288305,3.04406643575357,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0.600686115687835,0,0.336393253036082,0,0.2933531432838,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0.65147236858747,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0.502257091432126,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.587403472388222,0,0,0,0.106727557803444,1.21251028578504,1.66435439510497,2.11673205330776,0.248107807818777,2.60885354589706,2.80660094433074,0.128139149255701,1.02341449813341,0.160853921143607,0,0.925258162815933,0.532685175939381,0.164254312027618,0,0.348631135379878,0,0.200506470303285,0,0,0,0,0.451199612907412,1.30926073077505,0,0,0,0,0,1.51141141271498,3.08454505380579,0.541892875087706,1.00337954770971,0,0,0.671624264166535,0,0,0,0,0,0.824328093181778,0.183138929636687,0.165018999841176,0,0.650060246036521,0,0,0.308097234229289,0.614014698904518,0.137836572484531,0.537101224341368,0,0.170453254832202,0.0890320356467374,0.165284915360978,0.384380134730212,0,0,0.929691098594572,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.636406495851874,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.545999645631943,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,1.03558180854457,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0.764637207142375,0,0,0,0.648473311192717,0,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0.23874448473769,0.890894042497916,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0,0,0,0.692552326534174,0,0,0.807818799687949,0.108647371922008,0,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.442306057399416,1.20258735531594,0.518440956986236,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.484945082442097,0,1.58186518546373,0.274083849293502,0.19871461170299,0.0633107959558787,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.837847203816763,0.458320848023367,0.717873024576814,0.599037001496973,0.858452096273142,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0.825236619583403,0.415440338029185,0,0,0.121499113316049,0,0.945668487590378,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,2.39460383124975,0,0.170388021785422,0,0.439656701034247,0,0.129282956361551,0.39669780522807,0,0,0.640724475406168,0.314408610199332,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0,0,0.303298235083296,0,0,0,0,0,0,0,0,1.0062716070103,0.889811221596536,0.457680136793847,0.604923695052956,0.777186002913902,0.591420599958536,0.159296767163702,0,0.621051827505038,0,0.265841714557995,2.60872530905867,1.05180326298053,1.14241563650639,0.406870733204662,0.909243296012797,0.859284456339908,0.464033759878494,0,0.400027764663154,0.343395705182793,0,0,0,0.428883182749851,0,0,0,0,0,0,0,1.41351316756705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21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| |||
|short_description=p7@HLA-DPA1 | |||
}} |
Latest revision as of 05:38, 18 September 2015
Short description: | p7@HLA-DPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HLA-DPA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000419277_5end |
EntrezGene: | HLA-DPA1 |
HGNC: | 4938 |
UniProt: | P20036 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.72e-14 | 3 |
lymphangioblast | 8.74e-08 | 6 |
endothelial cell of lymphatic vessel | 8.74e-08 | 6 |
vascular lymphangioblast | 8.74e-08 | 6 |
preadipocyte of the breast | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
placenta | 5.49e-11 | 4 |
allantois | 5.49e-11 | 4 |
chorion | 1.54e-10 | 7 |
urogenital ridge | 3.29e-10 | 11 |
lymphatic vessel | 1.11e-09 | 8 |
lymph vasculature | 1.11e-09 | 8 |
lymphatic part of lymphoid system | 1.11e-09 | 8 |
intraembryonic coelom | 2.14e-09 | 12 |
mesonephros | 2.60e-08 | 9 |
pronephros | 2.60e-08 | 9 |
nephrogenic cord | 2.60e-08 | 9 |
pronephric mesoderm | 2.60e-08 | 9 |
rostral part of nephrogenic cord | 2.60e-08 | 9 |
presumptive pronephric mesoderm | 2.60e-08 | 9 |
lymphoid system | 9.52e-08 | 10 |
renal system | 1.28e-07 | 48 |
breast | 1.40e-07 | 10 |
chest | 6.81e-07 | 11 |
male reproductive organ | 8.47e-07 | 11 |
abdominal segment of trunk | 8.50e-07 | 60 |
abdomen | 8.50e-07 | 60 |