FFCP PHASE1:Hg19::chr11:47546116..47546128,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10658 | |EntrezGene=10658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2549 | |HGNC=2549 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7M7 | |UniProt=F5H7M7 | ||
|association_with_transcript=97bp_to_ENST00000528538_5end | |association_with_transcript=97bp_to_ENST00000528538_5end | ||
|cluster_id=chr11:47546116..47546128,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_40_at_CELF1_5end | |description=CAGE_peak_40_at_CELF1_5end | ||
|id=chr11:47546116..47546128,- | |id=chr11:47546116..47546128,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.20e-147;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.89e-34!115;UBERON:0001950!2.04e-23!20;UBERON:0001869!1.26e-21!32;UBERON:0001049!2.52e-21!57;UBERON:0005068!2.52e-21!57;UBERON:0006241!2.52e-21!57;UBERON:0007135!2.52e-21!57;UBERON:0002619!4.30e-21!22;UBERON:0002616!2.06e-20!59;UBERON:0001893!3.81e-20!34;UBERON:0000956!2.78e-18!25;UBERON:0000203!2.78e-18!25;UBERON:0000955!3.73e-18!69;UBERON:0006238!3.73e-18!69;UBERON:0002791!4.23e-18!33;UBERON:0002020!1.80e-17!34;UBERON:0003528!1.80e-17!34;UBERON:0003075!1.82e-16!86;UBERON:0007284!1.82e-16!86;UBERON:0005743!2.87e-16!86;UBERON:0002780!4.38e-16!41;UBERON:0001890!4.38e-16!41;UBERON:0006240!4.38e-16!41;UBERON:0001017!7.85e-16!82;UBERON:0003080!1.30e-15!42;UBERON:0002346!1.88e-15!90;UBERON:0000073!3.78e-14!94;UBERON:0001016!3.78e-14!94;UBERON:0000200!1.42e-13!6;UBERON:0003056!6.15e-11!61;UBERON:0000153!8.31e-11!129;UBERON:0007811!8.31e-11!129;UBERON:0000033!1.37e-10!123;UBERON:0002771!2.77e-10!3;UBERON:0001871!5.89e-10!7;UBERON:0004733!6.86e-09!12;UBERON:0002028!6.86e-09!12;UBERON:0007277!6.86e-09!12;UBERON:0004732!3.77e-08!13;UBERON:0004121!2.49e-07!169;UBERON:0000924!5.11e-07!173;UBERON:0006601!5.11e-07!173;UBERON:0003076!5.77e-07!15;UBERON:0003057!5.77e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.92e-74;6!UBERON:0002902;5.12e-50;1!UBERON:0009899;5.12e-50;1!UBERON:0002680;6.09e-50;9!UBERON:0001895;6.09e-50;9!UBERON:0004733;9.17e-38;12!UBERON:0002028;9.17e-38;12!UBERON:0004732;5.97e-35;13!UBERON:0000073;2.25e-11;53!UBERON:0002616;2.25e-11;53!UBERON:0002021;3.42e-11;5!UBERON:0000955;6.95e-11;68!UBERON:0001016;3.85e-08;83!UBERON:0001017;2.02e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.31e-74,6;UBERON:0006215,3.31e-74,6;UBERON:0002902,3.99e-50,1;UBERON:0009899,3.99e-50,1;UBERON:0002680,6.62e-50,9;UBERON:0001895,6.62e-50,9;UBERON:0010092,6.62e-50,9;UBERON:0004733,9.76e-38,12;UBERON:0002028,9.76e-38,12;UBERON:0007277,9.76e-38,12;UBERON:0004732,6.32e-35,13;UBERON:0003076,2.01e-30,15;UBERON:0003057,2.01e-30,15;UBERON:0000073,1.70e-15,53;UBERON:0002616,1.70e-15,53;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0002021,3.26e-11,5;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0001016,1.88e-09,89;UBERON:0010371,2.22e-08,104;UBERON:0007023,8.86e-08,114;UBERON:0010314,8.99e-07,132 | |||
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| ||
|short_description=p40@CELF1 | |short_description=p40@CELF1 | ||
}} | }} |
Latest revision as of 05:42, 18 September 2015
Short description: | p40@CELF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_CELF1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 97bp_to_ENST00000528538_5end |
EntrezGene: | CELF1 |
HGNC: | 2549 |
UniProt: | F5H7M7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.31e-74 | 6 |
rhombic lip | 3.31e-74 | 6 |
occipital pole | 3.99e-50 | 1 |
pole of cerebral hemisphere | 3.99e-50 | 1 |
regional part of metencephalon | 6.62e-50 | 9 |
metencephalon | 6.62e-50 | 9 |
future metencephalon | 6.62e-50 | 9 |
segmental subdivision of hindbrain | 9.76e-38 | 12 |
hindbrain | 9.76e-38 | 12 |
presumptive hindbrain | 9.76e-38 | 12 |
segmental subdivision of nervous system | 6.32e-35 | 13 |
posterior neural tube | 2.01e-30 | 15 |
chordal neural plate | 2.01e-30 | 15 |
regional part of nervous system | 1.70e-15 | 53 |
regional part of brain | 1.70e-15 | 53 |
neural tube | 9.92e-15 | 56 |
neural rod | 9.92e-15 | 56 |
future spinal cord | 9.92e-15 | 56 |
neural keel | 9.92e-15 | 56 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
occipital lobe | 3.26e-11 | 5 |
central nervous system | 2.17e-10 | 81 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
nervous system | 1.88e-09 | 89 |
ecto-epithelium | 2.22e-08 | 104 |
adult organism | 8.86e-08 | 114 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |