FFCP PHASE1:Hg19::chr1:45965857..45965880,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25974 | |EntrezGene=25974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24525 | |HGNC=24525 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4U1 | |UniProt=Q9Y4U1 | ||
|association_with_transcript=1bp_to_NM_015506,uc001cny.2,uc009vxv.2_5end | |association_with_transcript=1bp_to_NM_015506,uc001cny.2,uc009vxv.2_5end | ||
|cluster_id=chr1:45965857..45965880,+ | |||
|description=CAGE_peak_2_at_MMACHC_5end | |description=CAGE_peak_2_at_MMACHC_5end | ||
|id=chr1:45965857..45965880,+ | |id=chr1:45965857..45965880,+ | ||
|ontology_enrichment_celltype=CL:0000213!1.74e-08!57;CL:0000215!1.74e-08!57;CL:0000066!4.82e-08!254;CL:0002139!4.00e-07!24;CL:0000115!7.19e-07!35 | |ontology_enrichment_celltype=CL:0000213!1.74e-08!57;CL:0000215!1.74e-08!57;CL:0000066!4.82e-08!254;CL:0002139!4.00e-07!24;CL:0000115!7.19e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.86e-10;24!CL:0000071;1.27e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.01e-10,24;CL:0000213,1.94e-09,58;CL:0000215,1.94e-09,58;CL:0000071,4.65e-09,18;CL:0002546,4.65e-09,18;CL:0000115,1.57e-08,36;CL:0002078,8.25e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002546;1.27e-08;18 | |||
|ontology_enrichment_disease=DOID:14566!2.50e-08!239;DOID:162!5.71e-08!235 | |ontology_enrichment_disease=DOID:14566!2.50e-08!239;DOID:162!5.71e-08!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.66e-07!286;UBERON:0004111!2.76e-07!241;UBERON:0000055!4.09e-07!69 | |ontology_enrichment_uberon=UBERON:0000477!1.66e-07!286;UBERON:0004111!2.76e-07!241;UBERON:0000055!4.09e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.27e-08;18!UBERON:0001986;1.27e-08;18!UBERON:0004852;1.27e-08;18!UBERON:0000487;1.46e-08;22!UBERON:0006914;5.20e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.65e-09,18;UBERON:0001986,4.65e-09,18;UBERON:0004852,4.65e-09,18;UBERON:0000487,6.05e-09,22;UBERON:0006914,2.47e-07,25;UBERON:0000055,3.27e-07,68 | |||
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|phase1_expression=0.54503513781167,1.2846031433459,1.40954404095971,0,0.893922188854576,0,0,0.631719873426831,0.783556884599516,0.491467873003018,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,0.672325146451775,1.80808358407193,0.730310090387373,0,0.123121058076788,0.612002073732759,0,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0,0.6024118375565,0.369754010166788,0.0774672005803016,0.710846162437108,0.293600439334847,0.553995408531877,0.200544447470142,0,0,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419317291016752,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0.790152254325231,0,0,0,0,0,0,0,0.445641827540694,0,0,0.270803863765016,0.25618263945135,0.260118695119756,0.328875809207352,0,0.289803085735052,0.296573126324121,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0.50133791063589,0.289693037921647,0.795285947051099,0.486634870302636,0,0.221729397462564,0.263504357079378,3.33996642519167,0,0,0,0,0.26591592103773,0.238490624305342,0,0,1.59009925893364,0,1.73570250803797,1.13061588384802,2.93649605346934,2.47606237746061,0.208994966536811,0,0.71153252537342,1.00416183829401,1.20848795132744,1.52054421143703,2.4406205754817,0.735326160691737,2.43042584364528,1.42879565254528,1.12264686313085,1.46394924628319,1.53316637465883,1.89853131913626,0.916008719652036,0,0,0,1.49091585508596,0.506522046658319,0.794455084879313,0,0.354668382198357,0.560677600142307,0,1.72667283892012,0,0.269421344139376,0.490385709340376,0.454072282934794,0,2.10889288650417,0.312160076830321,1.1409436430889,0.149448680551801,1.17434498643765,0.323745888736263,0.702254033511242,0.61246251376468,1.35117749042945,0.619954687054593,0,0.494533858557114,1.82032272387605,1.43723628363248,1.34668891163253,0.375355559615893,1.6623846929051,0,0.30648779579902,0.300476117813194,0.907457465280168,0.179389635688862,0.85422955527427,1.48352330811693,0.600182192168805,0.515262646192195,0.257640540045629,0.18611685633159,0.506328996723799,0.779496041289589,0,0.552299391853796,0.646584227275248,0,0.403008392910561,0.508681776931463,1.15956511897978,0.818238361772504,0.860413786167011,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,1.41968160047813,0.842923450390509,0.964044119533928,0.772057809126758,0.653638332277218,1.89816495288877,0.808987848960987,0.588664395376038,1.53898862778556,0.738155454624648,2.80483547606892,1.2347220339942,0,1.26755034821831,4.91413608338813,0.590789906681404,1.32438929824395,0,0,2.74375713521564,1.1240175325762,0.100528972411631,0.277765335475589,1.3032332212413,1.03993478527958,1.44331342025273,0,0,2.16549671641611,1.85194205030644,1.14152491340759,2.37061319387782,0.858486162094873,0.246217006087397,1.17002132569619,0.594524649154913,0.93733833986777,2.35174979478403,1.98485136139341,0.806026704325635,0.290633938513962,0.766765358330422,0.985326475791887,1.67292024625129,0.414656231081544,0.288239906833923,0.37872730027914,1.26995788584338,0.763976851116555,3.51652341630141,0,1.13110241973656,1.50171528921959,4.57322292208925,0.448524337381443,0,0.51336800074665,1.16344544182,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0.791951872933429,6.33022691825131,2.61460037580088,5.49851451501314,0,0,0,0.718874566474748,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0.112085143993527,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.630809660135739,0.819989904948992,0.601892199455438,0,0,0,0.184369168541703,0.60818530127658,0,0,0,0,0.320182673410333,0,1.66435439510497,0.30239029332968,1.73675465473144,0.306923946576125,0.280660094433074,1.15325234330131,2.04682899626681,1.93024705372329,0,0.462629081407967,0.355123450626254,0.574890092096664,0.519254429183621,0.348631135379878,0,2.00506470303285,0.644566922551274,1.03333003348146,0.910455840033585,0.917870904715969,0,0,0,0,0.316654886678627,1.13733384070897,0.340187410553031,0.431831832204279,1.54227252690289,0.541892875087706,0,1.52925763827023,0.831076008928724,0,0.657779629937804,0,0.769350375349168,1.31205858279882,0.976135183992909,1.54561517471583,0.640986253728404,0.495056999523528,1.14853107599234,0.650060246036521,1.6068392984416,0.96670718292122,0.154048617114644,0,0.137836572484531,0.644521469209642,0.145016693914229,0.511359764496605,0.356128142586949,0.826424576804891,0.768760269460425,0.127612712494584,0.910420027699949,1.39453664789186,0,0,0.616067160352178,0.532306030317022,0,2.03856641014312,0.143124886741991,0.372158369359667,0.316379424718726,0.571890581771475,0.767693373934002,0.42793898803392,0.95460974377781,0,0,0,0.353437207037059,1.2130948894399,0,0.421258456238981,2.92580243453754,1.46228093778771,1.05650146756755,0.818999468447914,1.1312434556297,0,2.2054613741845,1.990316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| ||
|short_description=p2@MMACHC | |short_description=p2@MMACHC | ||
}} | }} |
Latest revision as of 07:44, 18 September 2015
Short description: | p2@MMACHC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MMACHC_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_NM_015506, uc001cny.2, uc009vxv.2_5end |
EntrezGene: | MMACHC |
HGNC: | 24525 |
UniProt: | Q9Y4U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.01e-10 | 24 |
lining cell | 1.94e-09 | 58 |
barrier cell | 1.94e-09 | 58 |
blood vessel endothelial cell | 4.65e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.65e-09 | 18 |
endothelial cell | 1.57e-08 | 36 |
meso-epithelial cell | 8.25e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.65e-09 | 18 |
endothelium | 4.65e-09 | 18 |
cardiovascular system endothelium | 4.65e-09 | 18 |
simple squamous epithelium | 6.05e-09 | 22 |
squamous epithelium | 2.47e-07 | 25 |
vessel | 3.27e-07 | 68 |