FFCP PHASE1:Hg19::chr3:44975003..44975027,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51304 | |EntrezGene=51304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18470 | |HGNC=18470 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-62bp_to_ENST00000479314_5end | |association_with_transcript=-62bp_to_ENST00000479314_5end | ||
|cluster_id=chr3:44975003..44975027,- | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_9_at_ZDHHC3_5end | |description=CAGE_peak_9_at_ZDHHC3_5end | ||
|id=chr3:44975003..44975027,- | |id=chr3:44975003..44975027,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.88e-21;29!UBERON:0001041;8.88e-21;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002148!2.96e-29!2;UBERON:0009662!2.96e-29!2;UBERON:0002298!2.83e-28!8;UBERON:0000988!7.16e-20!3;UBERON:0006331!7.16e-20!3;UBERON:0001896!1.85e-19!3;UBERON:0005290!1.85e-19!3;UBERON:0010096!1.85e-19!3;UBERON:0004733!5.43e-19!12;UBERON:0002028!5.43e-19!12;UBERON:0007277!5.43e-19!12;UBERON:0004732!1.47e-17!13;UBERON:0002171!6.44e-16!1;UBERON:0006518!6.44e-16!1;UBERON:0008949!6.44e-16!1;UBERON:0000101!6.44e-16!1;UBERON:0002167!6.44e-16!1;UBERON:0003076!2.89e-15!15;UBERON:0003057!2.89e-15!15;UBERON:0007190!3.17e-15!1;UBERON:0002046!1.69e-12!5;UBERON:0004117!1.69e-12!5;UBERON:0007689!1.69e-12!5;UBERON:0007123!1.69e-12!5;UBERON:0003091!1.69e-12!5;UBERON:0000200!2.90e-10!6;UBERON:0007023!4.39e-09!115;UBERON:0001049!1.98e-08!57;UBERON:0005068!1.98e-08!57;UBERON:0006241!1.98e-08!57;UBERON:0007135!1.98e-08!57;UBERON:0002616!3.87e-08!59;UBERON:0002680!3.04e-07!9;UBERON:0002308!3.04e-07!9;UBERON:0000125!3.04e-07!9;UBERON:0001895!3.04e-07!9;UBERON:0010092!3.04e-07!9;UBERON:0000955!7.92e-07!69;UBERON:0006238!7.92e-07!69 | |ontology_enrichment_uberon=UBERON:0002148!2.96e-29!2;UBERON:0009662!2.96e-29!2;UBERON:0002298!2.83e-28!8;UBERON:0000988!7.16e-20!3;UBERON:0006331!7.16e-20!3;UBERON:0001896!1.85e-19!3;UBERON:0005290!1.85e-19!3;UBERON:0010096!1.85e-19!3;UBERON:0004733!5.43e-19!12;UBERON:0002028!5.43e-19!12;UBERON:0007277!5.43e-19!12;UBERON:0004732!1.47e-17!13;UBERON:0002171!6.44e-16!1;UBERON:0006518!6.44e-16!1;UBERON:0008949!6.44e-16!1;UBERON:0000101!6.44e-16!1;UBERON:0002167!6.44e-16!1;UBERON:0003076!2.89e-15!15;UBERON:0003057!2.89e-15!15;UBERON:0007190!3.17e-15!1;UBERON:0002046!1.69e-12!5;UBERON:0004117!1.69e-12!5;UBERON:0007689!1.69e-12!5;UBERON:0007123!1.69e-12!5;UBERON:0003091!1.69e-12!5;UBERON:0000200!2.90e-10!6;UBERON:0007023!4.39e-09!115;UBERON:0001049!1.98e-08!57;UBERON:0005068!1.98e-08!57;UBERON:0006241!1.98e-08!57;UBERON:0007135!1.98e-08!57;UBERON:0002616!3.87e-08!59;UBERON:0002680!3.04e-07!9;UBERON:0002308!3.04e-07!9;UBERON:0000125!3.04e-07!9;UBERON:0001895!3.04e-07!9;UBERON:0010092!3.04e-07!9;UBERON:0000955!7.92e-07!69;UBERON:0006238!7.92e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.39e-66;1!UBERON:0006518;2.39e-66;1!UBERON:0008949;2.39e-66;1!UBERON:0000101;2.39e-66;1!UBERON:0002167;2.39e-66;1!UBERON:0002048;7.08e-28;22!UBERON:0000117;7.08e-28;22!UBERON:0000171;7.08e-28;22!UBERON:0000170;7.08e-28;22!UBERON:0005178;1.94e-16;34!UBERON:0002224;1.94e-16;34!UBERON:0000065;3.47e-13;44!UBERON:0005181;5.80e-13;35!UBERON:0000915;6.73e-10;52!UBERON:0001004;7.29e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.39e-66,1;UBERON:0006518,2.39e-66,1;UBERON:0008949,2.39e-66,1;UBERON:0000101,2.39e-66,1;UBERON:0002167,2.39e-66,1;UBERON:0002048,7.08e-28,22;UBERON:0000117,7.08e-28,22;UBERON:0000171,7.08e-28,22;UBERON:0000170,7.08e-28,22;UBERON:0005597,7.08e-28,22;UBERON:0000118,7.08e-28,22;UBERON:0005178,1.78e-18,34;UBERON:0002224,1.78e-18,34;UBERON:0005181,5.55e-18,35;UBERON:0005153,4.49e-17,37;UBERON:0008947,1.18e-16,38;UBERON:0003258,1.18e-16,38;UBERON:0005157,1.10e-13,47;UBERON:0000915,1.77e-12,52;UBERON:0000065,4.68e-12,54;UBERON:0001004,4.40e-09,74;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101 | |||
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|short_description=p9@ZDHHC3 | |short_description=p9@ZDHHC3 | ||
}} | }} |
Latest revision as of 08:19, 18 September 2015
Short description: | p9@ZDHHC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ZDHHC3_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | -62bp_to_ENST00000479314_5end |
EntrezGene: | ZDHHC3 |
HGNC: | 18470 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.39e-66 | 1 |
right lung lobe | 2.39e-66 | 1 |
lower lobe of lung | 2.39e-66 | 1 |
lobe of lung | 2.39e-66 | 1 |
right lung | 2.39e-66 | 1 |
lung | 7.08e-28 | 22 |
respiratory tube | 7.08e-28 | 22 |
respiration organ | 7.08e-28 | 22 |
pair of lungs | 7.08e-28 | 22 |
lung primordium | 7.08e-28 | 22 |
lung bud | 7.08e-28 | 22 |
thoracic cavity element | 1.78e-18 | 34 |
thoracic cavity | 1.78e-18 | 34 |
thoracic segment organ | 5.55e-18 | 35 |
epithelial bud | 4.49e-17 | 37 |
respiratory primordium | 1.18e-16 | 38 |
endoderm of foregut | 1.18e-16 | 38 |
epithelial fold | 1.10e-13 | 47 |
thoracic segment of trunk | 1.77e-12 | 52 |
respiratory tract | 4.68e-12 | 54 |
respiratory system | 4.40e-09 | 74 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
trunk region element | 6.45e-07 | 101 |