FFCP PHASE1:Hg19::chr11:5712234..5712264,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:5712234..5712264,+
|short_description=p8@TRIM22
|description=CAGE_peak_8_at_TRIM22_5end
|association_with_transcript=0bp_to_ENST00000414641_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10346 | |EntrezGene=10346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16379 | |HGNC=16379 | ||
|TSSclassifier=strong | |||
|UniProt=C9JIU5 | |UniProt=C9JIU5 | ||
|association_with_transcript=0bp_to_ENST00000414641_5end | |||
|cluster_id=chr11:5712234..5712264,+ | |||
|description=CAGE_peak_8_at_TRIM22_5end | |||
|id=chr11:5712234..5712264,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.26e-10!75;CL:0002334!2.03e-09!12;CL:0000055!5.93e-09!180;CL:0000048!2.59e-08!430;CL:0000723!8.77e-08!436;CL:0000034!4.11e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:1000306;9.76e-23;4!CL:0002547;9.76e-23;4!CL:0000764;2.55e-12;2!CL:0000558;2.55e-12;2!CL:0000077;1.43e-10;19!CL:0000511;2.50e-07;1!CL:0002625;2.50e-07;1!CL:0000216;2.50e-07;1!CL:0000222;8.23e-07;1!CL:0002581;8.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,6.82e-23,4;CL:0002547,6.82e-23,4;CL:0000764,2.79e-12,2;CL:0000765,2.79e-12,2;CL:0000050,2.79e-12,2;CL:0000038,2.79e-12,2;CL:0000558,2.79e-12,2;CL:0000547,2.79e-12,2;CL:0000549,2.79e-12,2;CL:0000550,2.79e-12,2;CL:0000552,2.79e-12,2;CL:0000077,1.56e-10,19;CL:0000511,2.50e-07,1;CL:0002625,2.50e-07,1;CL:0000216,2.50e-07,1;CL:0002581,5.69e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;8.23e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;7.24e-18;3!DOID:127;7.24e-18;3!DOID:0060072;1.55e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.66e-18,3;DOID:127,3.66e-18,3;DOID:0060072,9.37e-14,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;9.76e-23;4!UBERON:0000415;9.76e-23;4!UBERON:0007240;9.76e-23;4!UBERON:0005742;9.76e-23;4!UBERON:0005734;9.76e-23;4!UBERON:0004664;9.76e-23;4!UBERON:0004663;9.76e-23;4!UBERON:0001136;2.50e-07;1!UBERON:0001343;2.50e-07;1!UBERON:0004910;2.50e-07;1!UBERON:0004813;2.50e-07;1!UBERON:0004573;5.25e-07;33!UBERON:0004571;5.25e-07;33!UBERON:0002079;8.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,6.82e-23,4;UBERON:0007240,6.82e-23,4;UBERON:0005742,6.82e-23,4;UBERON:0005734,6.82e-23,4;UBERON:0004664,6.82e-23,4;UBERON:0004663,6.82e-23,4;UBERON:0004797,3.69e-13,7;UBERON:0004573,1.84e-07,33;UBERON:0004571,1.84e-07,33;UBERON:0001136,2.50e-07,1;UBERON:0001343,2.50e-07,1;UBERON:0004910,2.50e-07,1;UBERON:0005154,2.50e-07,1;UBERON:0005295,2.50e-07,1;UBERON:0004813,2.50e-07,1;UBERON:0005297,2.50e-07,1;UBERON:0005294,2.50e-07,1;UBERON:0010141,2.50e-07,1;UBERON:0005891,2.50e-07,1;UBERON:0002079,6.76e-07,1;UBERON:0004871,8.72e-07,8 | |||
|phase1_expression=0.726713517082227,0.428201047781966,2.25527046553554,0,0.893922188854576,0,0,0.631719873426831,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,0,0.868755378820466,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,1.77282716330412,11.9168262731897,1.43418310374407,1.06400514659507,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0.570471821544449,0.298897361103602,0,0,0,0,0,0.309977343527296,0,0.741800787835671,0.910161361938026,0,0.168336113954066,0,0,0.438977620880838,0,0.300476117813194,0,0.538168907066586,0,0.211931901159562,0.600182192168805,0.103052529238439,0.772921620136887,0.37223371266318,0.675105328965065,0.194874010322397,0.504867548488229,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.297262324577456,0,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0,0.985326475791887,0.176096868026452,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0.300343057843917,0,0,0,0,0.775630294546667,0,0,1.32969058292435,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,3.01439377059586,4.35766729300147,1.19967589418468,0,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,0.35142424497814,0,0,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0,0,0,0.744323423456331,0.460385919864187,0.280660094433074,1.15325234330131,0,0.160853921143607,1.48418066444991,0.462629081407967,0.355123450626254,0.328508624055237,2.07701771673448,0.232420756919918,0,0,0,1.26295892981067,0.364182336013434,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,2.19259876645935,1.3071772551245,0.256450125116389,0,0.325378394664303,0,0,0,0,0,4.82051789532479,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,1.25924938732256,0.6970372701606,0.308033580176089,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0.404364963146632,1.58510321173008,0.421258456238981,0,1.46228093778771,0,0.409499734223957,0,0,0,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0,0,0.573645408816206,0.491245205065606,0,0.709522128141196,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0.179515288819544,0.108647371922008,0,0.549585560411174,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,3.25799761052228,1.72844298240254,2.28611152076586,0,0.082092520749339,1.19271615249795,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.250381861413,0.573409195690071,0,0,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0.467426619694449,1.10961172300523,0,0.251567901752575,0,1.60188047877847,1.36107831386915,0.621748802331122,0,0.318593534327405,0,0.465788870628778,1.65882483136342,0.53168342911599,0.521745061811734,0.601030435988874,0,0.406870733204662,0.181848659202559,0.429642228169954,0,0,0.800055529326307,0,0.673498977531838,1.26184898228651,0,2.35885750512418,0,0,0,0.244736704506468,0,0,6.35923743778251,0.883445729729405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.549451649953598,0,0,0,4.96633459802829,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,1.29787968637137,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0.134704106029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|short_description=p8@TRIM22 | |||
}} | }} |
Latest revision as of 09:08, 18 September 2015
Short description: | p8@TRIM22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TRIM22_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000414641_5end |
EntrezGene: | TRIM22 |
HGNC: | 16379 |
UniProt: | C9JIU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 6.82e-23 | 4 |
fibroblast of the aortic adventitia | 6.82e-23 | 4 |
erythroid lineage cell | 2.79e-12 | 2 |
erythroblast | 2.79e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 2.79e-12 | 2 |
erythroid progenitor cell | 2.79e-12 | 2 |
reticulocyte | 2.79e-12 | 2 |
proerythroblast | 2.79e-12 | 2 |
basophilic erythroblast | 2.79e-12 | 2 |
polychromatophilic erythroblast | 2.79e-12 | 2 |
orthochromatic erythroblast | 2.79e-12 | 2 |
mesothelial cell | 1.56e-10 | 19 |
androgen binding protein secreting cell | 2.50e-07 | 1 |
seminiferous tubule epithelial cell | 2.50e-07 | 1 |
Sertoli cell | 2.50e-07 | 1 |
perirenal preadipocyte | 5.69e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
artery wall | 6.82e-23 | 4 |
tunica adventitia of artery | 6.82e-23 | 4 |
adventitia | 6.82e-23 | 4 |
tunica adventitia of blood vessel | 6.82e-23 | 4 |
aorta tunica adventitia | 6.82e-23 | 4 |
aorta wall | 6.82e-23 | 4 |
blood vessel layer | 3.69e-13 | 7 |
systemic artery | 1.84e-07 | 33 |
systemic arterial system | 1.84e-07 | 33 |
mesothelium | 2.50e-07 | 1 |
seminiferous tubule of testis | 2.50e-07 | 1 |
epithelium of male gonad | 2.50e-07 | 1 |
epithelial cord | 2.50e-07 | 1 |
sex cord | 2.50e-07 | 1 |
seminiferous tubule epithelium | 2.50e-07 | 1 |
testis sex cord | 2.50e-07 | 1 |
genital ridge | 2.50e-07 | 1 |
primitive sex cord of indifferent gonad | 2.50e-07 | 1 |
coelomic epithelium | 2.50e-07 | 1 |
left cardiac atrium | 6.76e-07 | 1 |
somatic layer of lateral plate mesoderm | 8.72e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.66e-18 | 3 |
leiomyoma | 3.66e-18 | 3 |
benign neoplasm | 9.37e-14 | 4 |