FFCP PHASE1:Hg19::chr7:35734086..35734103,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:35734086..35734103,- to FFCP PHASE1:Hg19::chr7:35734086..35734103,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64224 | |EntrezGene=64224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21915 | |HGNC=21915 | ||
|TSSclassifier=strong | |||
|UniProt=C9J4Q7 | |UniProt=C9J4Q7 | ||
|association_with_transcript=72bp_to_ENST00000413517_5end | |||
|cluster_id=chr7:35734086..35734103,- | |||
|description=CAGE_peak_12_at_HERPUD2_5end | |||
|id=chr7:35734086..35734103,- | |||
|ontology_enrichment_celltype=CL:0002057!2.70e-14!42;CL:0000860!1.34e-13!45;CL:0002087!2.76e-09!119;CL:0000738!1.19e-08!140;CL:0002031!2.43e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.99e-20;33!CL:0002057;2.99e-20;33!CL:0000576;4.32e-16;48!CL:0000473;1.66e-14;39!CL:0000234;1.66e-14;39!CL:0002393;3.08e-09;6!CL:0002397;3.08e-09;6!CL:0000766;5.12e-08;69!CL:0002087;7.06e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.19e-27,42;CL:0002057,2.19e-27,42;CL:0000473,4.90e-23,48;CL:0000234,4.90e-23,48;CL:0002087,7.18e-18,115;CL:0002194,5.46e-17,59;CL:0000576,5.46e-17,59;CL:0000040,5.46e-17,59;CL:0000559,5.46e-17,59;CL:0000766,6.87e-17,72;CL:0000738,9.39e-17,136;CL:0002009,3.25e-16,61;CL:0000839,7.20e-16,66;CL:0002031,1.47e-15,120;CL:0000557,1.57e-15,67;CL:0000037,1.57e-11,168;CL:0002032,7.98e-11,161;CL:0000837,7.98e-11,161;CL:0000988,2.01e-10,177;CL:0000763,7.36e-09,108;CL:0000049,7.36e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.04e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.98e-13,98;UBERON:0003061,1.98e-13,98;UBERON:0002371,6.96e-13,76;UBERON:0001474,1.88e-11,82;UBERON:0002193,1.90e-11,108;UBERON:0001434,7.12e-11,100;UBERON:0004765,7.52e-11,90;UBERON:0002405,2.48e-09,93;UBERON:0002204,4.22e-07,167 | |||
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| ||
|short_description=p12@HERPUD2 | |||
}} | }} |
Latest revision as of 09:13, 18 September 2015
Short description: | p12@HERPUD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HERPUD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 72bp_to_ENST00000413517_5end |
EntrezGene: | HERPUD2 |
HGNC: | 21915 |
UniProt: | C9J4Q7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.19e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.19e-27 | 42 |
defensive cell | 4.90e-23 | 48 |
phagocyte | 4.90e-23 | 48 |
nongranular leukocyte | 7.18e-18 | 115 |
monopoietic cell | 5.46e-17 | 59 |
monocyte | 5.46e-17 | 59 |
monoblast | 5.46e-17 | 59 |
promonocyte | 5.46e-17 | 59 |
myeloid leukocyte | 6.87e-17 | 72 |
leukocyte | 9.39e-17 | 136 |
macrophage dendritic cell progenitor | 3.25e-16 | 61 |
myeloid lineage restricted progenitor cell | 7.20e-16 | 66 |
hematopoietic lineage restricted progenitor cell | 1.47e-15 | 120 |
granulocyte monocyte progenitor cell | 1.57e-15 | 67 |
hematopoietic stem cell | 1.57e-11 | 168 |
hematopoietic oligopotent progenitor cell | 7.98e-11 | 161 |
hematopoietic multipotent progenitor cell | 7.98e-11 | 161 |
hematopoietic cell | 2.01e-10 | 177 |
myeloid cell | 7.36e-09 | 108 |
common myeloid progenitor | 7.36e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.98e-13 | 98 |
blood island | 1.98e-13 | 98 |
bone marrow | 6.96e-13 | 76 |
bone element | 1.88e-11 | 82 |
hemolymphoid system | 1.90e-11 | 108 |
skeletal system | 7.12e-11 | 100 |
skeletal element | 7.52e-11 | 90 |
immune system | 2.48e-09 | 93 |
musculoskeletal system | 4.22e-07 | 167 |