FFCP PHASE1:Hg19::chr2:74120126..74120142,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=72 | |EntrezGene=72 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=145 | |HGNC=145 | ||
|TSSclassifier=strong | |||
|UniProt=P63267 | |UniProt=P63267 | ||
|association_with_transcript=0bp_to_ENST00000409624,ENST00000468543_5end | |association_with_transcript=0bp_to_ENST00000409624,ENST00000468543_5end | ||
|cluster_id=chr2:74120126..74120142,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_1_at_ACTG2_5end | |description=CAGE_peak_1_at_ACTG2_5end | ||
|id=chr2:74120126..74120142,+ | |id=chr2:74120126..74120142,+ | ||
|ontology_enrichment_celltype=CL:0000192!1.42e-14!42;CL:0000514!1.42e-14!42;CL:0000055!1.01e-13!180;CL:0000393!1.21e-13!60;CL:0000211!1.21e-13!60;CL:0000183!8.61e-13!59;CL:0000187!1.17e-12!54;CL:0000680!1.18e-11!57;CL:0000056!1.18e-11!57;CL:0000355!1.18e-11!57;CL:0000359!2.40e-10!32 | |ontology_enrichment_celltype=CL:0000192!1.42e-14!42;CL:0000514!1.42e-14!42;CL:0000055!1.01e-13!180;CL:0000393!1.21e-13!60;CL:0000211!1.21e-13!60;CL:0000183!8.61e-13!59;CL:0000187!1.17e-12!54;CL:0000680!1.18e-11!57;CL:0000056!1.18e-11!57;CL:0000355!1.18e-11!57;CL:0000359!2.40e-10!32 | ||
|ontology_enrichment_celltype_v019=CL:0000192;8.71e-12;43!CL:0000359;2.59e-10;32!CL:0000187;1.65e-07;55!CL:0000393;4.96e-07;61!CL:0000211;4.96e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.23e-16,43;CL:0000514,3.23e-16,43;CL:0000393,3.07e-14,61;CL:0000211,3.07e-14,61;CL:0000187,4.30e-13,55;CL:0000680,1.54e-11,58;CL:0000056,1.54e-11,58;CL:0000355,1.54e-11,58;CL:0000359,5.48e-11,32 | |||
|ontology_enrichment_development_v019=CL:0000514;8.71e-12;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!7.42e-20!347;UBERON:0000914!1.85e-14!83;UBERON:0002329!1.85e-14!83;UBERON:0003077!1.85e-14!83;UBERON:0003059!1.85e-14!83;UBERON:0007282!1.85e-14!83;UBERON:0009618!1.85e-14!83;UBERON:0007285!1.85e-14!83;UBERON:0002385!6.90e-14!63;UBERON:0001015!6.90e-14!63;UBERON:0000383!6.90e-14!63;UBERON:0007023!9.94e-14!115;UBERON:0000475!2.55e-13!365;UBERON:0001134!8.95e-13!61;UBERON:0002036!8.95e-13!61;UBERON:0003082!8.95e-13!61;UBERON:0005256!5.27e-12!143;UBERON:0004290!5.28e-12!70;UBERON:0000468!2.23e-11!659;UBERON:0003104!2.63e-11!238;UBERON:0009142!2.63e-11!238;UBERON:0000477!6.63e-10!286;UBERON:0000486!4.74e-09!82;UBERON:0000924!6.03e-09!173;UBERON:0006601!6.03e-09!173;UBERON:0000922!6.27e-09!612;UBERON:0000033!6.95e-09!123;UBERON:0000153!7.52e-09!129;UBERON:0007811!7.52e-09!129;UBERON:0004121!9.37e-09!169;UBERON:0000467!4.29e-08!625;UBERON:0000480!4.58e-08!626;UBERON:0005156!8.01e-08!59;UBERON:0000990!8.01e-08!59;UBERON:0002050!1.02e-07!605;UBERON:0005423!1.02e-07!605;UBERON:0000923!2.02e-07!604;UBERON:0005291!2.02e-07!604;UBERON:0006598!2.02e-07!604;UBERON:0002532!2.02e-07!604;UBERON:0000062!6.01e-07!511 | |ontology_enrichment_uberon=UBERON:0000481!7.42e-20!347;UBERON:0000914!1.85e-14!83;UBERON:0002329!1.85e-14!83;UBERON:0003077!1.85e-14!83;UBERON:0003059!1.85e-14!83;UBERON:0007282!1.85e-14!83;UBERON:0009618!1.85e-14!83;UBERON:0007285!1.85e-14!83;UBERON:0002385!6.90e-14!63;UBERON:0001015!6.90e-14!63;UBERON:0000383!6.90e-14!63;UBERON:0007023!9.94e-14!115;UBERON:0000475!2.55e-13!365;UBERON:0001134!8.95e-13!61;UBERON:0002036!8.95e-13!61;UBERON:0003082!8.95e-13!61;UBERON:0005256!5.27e-12!143;UBERON:0004290!5.28e-12!70;UBERON:0000468!2.23e-11!659;UBERON:0003104!2.63e-11!238;UBERON:0009142!2.63e-11!238;UBERON:0000477!6.63e-10!286;UBERON:0000486!4.74e-09!82;UBERON:0000924!6.03e-09!173;UBERON:0006601!6.03e-09!173;UBERON:0000922!6.27e-09!612;UBERON:0000033!6.95e-09!123;UBERON:0000153!7.52e-09!129;UBERON:0007811!7.52e-09!129;UBERON:0004121!9.37e-09!169;UBERON:0000467!4.29e-08!625;UBERON:0000480!4.58e-08!626;UBERON:0005156!8.01e-08!59;UBERON:0000990!8.01e-08!59;UBERON:0002050!1.02e-07!605;UBERON:0005423!1.02e-07!605;UBERON:0000923!2.02e-07!604;UBERON:0005291!2.02e-07!604;UBERON:0006598!2.02e-07!604;UBERON:0002532!2.02e-07!604;UBERON:0000062!6.01e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.58e-07;33 | |||
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| ||
|short_description=p1@ACTG2 | |short_description=p1@ACTG2 | ||
}} | }} |
Latest revision as of 09:46, 18 September 2015
Short description: | p1@ACTG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACTG2_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_ENST00000409624, ENST00000468543_5end |
EntrezGene: | ACTG2 |
HGNC: | 145 |
UniProt: | P63267 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.23e-16 | 43 |
smooth muscle myoblast | 3.23e-16 | 43 |
electrically responsive cell | 3.07e-14 | 61 |
electrically active cell | 3.07e-14 | 61 |
muscle cell | 4.30e-13 | 55 |
muscle precursor cell | 1.54e-11 | 58 |
myoblast | 1.54e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.54e-11 | 58 |
vascular associated smooth muscle cell | 5.48e-11 | 32 |