FFCP PHASE1:Hg19::chr1:47698007..47698019,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11556 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-115bp_to_ENST00000464796,uc001cqz.1,uc001cra.1_5end | |||
|cluster_id=chr1:47698007..47698019,- | |||
|coexpression_cluster_id=C3983 | |||
|description=CAGE_peak_13_at_TAL1_5end | |||
|id=chr1:47698007..47698019,- | |||
|ontology_enrichment_celltype=CL:0002139!2.26e-27!24;CL:0000115!1.45e-19!35;CL:0000071!1.83e-19!18;CL:0002546!1.83e-19!18;CL:0002078!1.67e-14!44;CL:0002274!1.61e-13!5;CL:0000457!1.61e-13!5;CL:0002191!1.61e-13!5;CL:0000097!1.61e-13!5;CL:0000831!1.61e-13!5;CL:0002028!1.61e-13!5;CL:0000213!4.48e-10!57;CL:0000215!4.48e-10!57;CL:0002543!8.40e-10!6;CL:0005020!1.45e-09!6;CL:0002138!1.45e-09!6;CL:0005022!1.45e-09!6;CL:1000413!4.61e-09!9;CL:0002618!1.58e-07!3;CL:0000163!2.88e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.14e-36;5!CL:0000764;3.69e-23;2!CL:0000558;3.69e-23;2!CL:0000163;3.54e-20;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.16e-36,5;CL:0002028,6.16e-36,5;CL:0000764,3.91e-23,2;CL:0000765,3.91e-23,2;CL:0000050,3.91e-23,2;CL:0000038,3.91e-23,2;CL:0000558,3.91e-23,2;CL:0000547,3.91e-23,2;CL:0000549,3.91e-23,2;CL:0000550,3.91e-23,2;CL:0000552,3.91e-23,2;CL:0000163,3.90e-20,9;CL:0000763,8.24e-09,108;CL:0000049,8.24e-09,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!8.81e-09!31;DOID:1240!1.15e-07!39;DOID:1036!3.28e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:8552;3.44e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,3.08e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.83e-19!18;UBERON:0004638!1.83e-19!18;UBERON:0004852!1.83e-19!18;UBERON:0000487!2.52e-15!22;UBERON:0006914!4.25e-13!25;UBERON:0007023!1.08e-12!115;UBERON:0004535!1.77e-09!110;UBERON:0003915!4.61e-09!9;UBERON:0004700!4.61e-09!9;UBERON:0001917!4.61e-09!9;UBERON:0001009!4.82e-09!113;UBERON:0000055!1.82e-08!69;UBERON:0000178!1.69e-07!15;UBERON:0000179!1.69e-07!15;UBERON:0000463!1.69e-07!15;UBERON:0001473!4.50e-07!8;UBERON:0004536!4.50e-07!8;UBERON:0006558!4.50e-07!8;UBERON:0002049!8.38e-07!79;UBERON:0007798!8.38e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.00e-12;15!UBERON:0000179;3.00e-12;15!UBERON:0000463;3.00e-12;15!UBERON:0002390;6.43e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.71e-12,15;UBERON:0000179,2.71e-12,15;UBERON:0000463,2.71e-12,15;UBERON:0002390,5.11e-08,98;UBERON:0003061,5.11e-08,98;UBERON:0002193,3.56e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.838998872419812,0.275118041940067,0.208994966536811,0.258416759169329,0,0.33472061276467,0.805658634218294,0,0.24406205754817,0.367663080345869,0.81014194788176,0.267899184852239,0.22452937262617,0.450445921933289,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,1.14462964217194,7.04915592838625,6.62951785718023,4.67097003677606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,3.08454505380579,0,0,0,0,0,3.28889814968902,4.18296721639841,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,7.10426652925037,6.117097657139,0,0,0.411362273086194,0.648473311192717,1.62009431171434,5.55187623405989,0,0,0,0,0,0,0.478278818186467,0.399158742865633,0,0.846694330895531,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,1.23087398947712,4.32729085561573,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,1.32969345520125,0,0.392125068635479,0.335643173951685,0,0.158936578980379,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,1.39557285273876,0,0,0,5.30027555648885,0,0,0,0,0.640724475406168,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,1.28915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | |||
|short_description=p13@TAL1 | |||
}} |
Latest revision as of 10:00, 18 September 2015
Short description: | p13@TAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TAL1_5end |
Coexpression cluster: | C3983_Mast_Reticulocytes_blood_Whole_acute_liver_chronic |
Association with transcript: | -115bp_to_ENST00000464796, uc001cqz.1, uc001cra.1_5end |
EntrezGene: | TAL1 |
HGNC: | 11556 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.16e-36 | 5 |
basophil mast progenitor cell | 6.16e-36 | 5 |
erythroid lineage cell | 3.91e-23 | 2 |
erythroblast | 3.91e-23 | 2 |
megakaryocyte-erythroid progenitor cell | 3.91e-23 | 2 |
erythroid progenitor cell | 3.91e-23 | 2 |
reticulocyte | 3.91e-23 | 2 |
proerythroblast | 3.91e-23 | 2 |
basophilic erythroblast | 3.91e-23 | 2 |
polychromatophilic erythroblast | 3.91e-23 | 2 |
orthochromatic erythroblast | 3.91e-23 | 2 |
endocrine cell | 3.90e-20 | 9 |
myeloid cell | 8.24e-09 | 108 |
common myeloid progenitor | 8.24e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 2.71e-12 | 15 |
haemolymphatic fluid | 2.71e-12 | 15 |
organism substance | 2.71e-12 | 15 |
hematopoietic system | 5.11e-08 | 98 |
blood island | 5.11e-08 | 98 |
hemolymphoid system | 3.56e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 3.08e-12 | 1 |