FFCP PHASE1:Hg19::chr1:165796870..165796886,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7371 | |EntrezGene=7371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12562 | |HGNC=12562 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_uc001gdp.2,uc010plb.1_5end | |association_with_transcript=-3bp_to_uc001gdp.2,uc010plb.1_5end | ||
|cluster_id=chr1:165796870..165796886,+ | |||
|coexpression_cluster_id=C2540 | |coexpression_cluster_id=C2540 | ||
|description=CAGE_peak_4_at_UCK2_5end | |description=CAGE_peak_4_at_UCK2_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.05e-19!254;CL:0000220!1.64e-18!246;CL:0002321!2.34e-18!248;CL:0000055!2.55e-14!180;CL:0000548!7.32e-14!679;CL:0000004!7.32e-14!679;CL:0000255!7.32e-14!679;CL:0000222!1.64e-13!119;CL:0000012!3.78e-13!682;CL:0000076!1.93e-09!62;CL:0000680!6.23e-09!57;CL:0000056!6.23e-09!57;CL:0000355!6.23e-09!57;CL:0000393!2.57e-08!60;CL:0000211!2.57e-08!60;CL:0000183!4.05e-08!59;CL:0000187!4.51e-08!54;CL:0000192!6.78e-08!42;CL:0000514!6.78e-08!42;CL:0000057!1.43e-07!75 | |ontology_enrichment_celltype=CL:0000066!1.05e-19!254;CL:0000220!1.64e-18!246;CL:0002321!2.34e-18!248;CL:0000055!2.55e-14!180;CL:0000548!7.32e-14!679;CL:0000004!7.32e-14!679;CL:0000255!7.32e-14!679;CL:0000222!1.64e-13!119;CL:0000012!3.78e-13!682;CL:0000076!1.93e-09!62;CL:0000680!6.23e-09!57;CL:0000056!6.23e-09!57;CL:0000355!6.23e-09!57;CL:0000393!2.57e-08!60;CL:0000211!2.57e-08!60;CL:0000183!4.05e-08!59;CL:0000187!4.51e-08!54;CL:0000192!6.78e-08!42;CL:0000514!6.78e-08!42;CL:0000057!1.43e-07!75 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.22e-20,253;CL:0002321,1.80e-18,250;CL:0000222,1.17e-13,121;CL:0000076,2.35e-09,63;CL:0000680,7.48e-09,58;CL:0000056,7.48e-09,58;CL:0000355,7.48e-09,58;CL:0000393,3.69e-08,61;CL:0000211,3.69e-08,61;CL:0000057,4.69e-08,76;CL:0000187,5.41e-08,55;CL:0000192,8.80e-08,43;CL:0000514,8.80e-08,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!7.72e-11!143;DOID:14566!5.63e-10!239;DOID:162!5.82e-10!235;DOID:305!8.26e-09!106 | |ontology_enrichment_disease=DOID:0050687!7.72e-11!143;DOID:14566!5.63e-10!239;DOID:162!5.82e-10!235;DOID:305!8.26e-09!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.76e-11,143;DOID:14566,9.12e-10,239;DOID:162,9.47e-10,235;DOID:305,8.16e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0000119!2.12e-12!312;UBERON:0003104!3.16e-12!238;UBERON:0009142!3.16e-12!238;UBERON:0000486!5.22e-12!82;UBERON:0000483!6.41e-12!309;UBERON:0000490!9.31e-12!138;UBERON:0005256!2.79e-11!143;UBERON:0002100!5.19e-11!216;UBERON:0002049!6.10e-11!79;UBERON:0007798!6.10e-11!79;UBERON:0001981!1.66e-10!60;UBERON:0007500!1.66e-10!60;UBERON:0004537!1.66e-10!60;UBERON:0006965!1.66e-10!60;UBERON:0003914!2.84e-10!118;UBERON:0000055!2.96e-10!69;UBERON:0000914!5.85e-10!83;UBERON:0002329!5.85e-10!83;UBERON:0003077!5.85e-10!83;UBERON:0003059!5.85e-10!83;UBERON:0007282!5.85e-10!83;UBERON:0009618!5.85e-10!83;UBERON:0007285!5.85e-10!83;UBERON:0004290!5.92e-10!70;UBERON:0002385!6.03e-09!63;UBERON:0001015!6.03e-09!63;UBERON:0000383!6.03e-09!63;UBERON:0001134!8.13e-09!61;UBERON:0002036!8.13e-09!61;UBERON:0003082!8.13e-09!61;UBERON:0001637!4.01e-08!42;UBERON:0003509!4.01e-08!42;UBERON:0004572!4.01e-08!42;UBERON:0000481!4.36e-08!347;UBERON:0000475!5.69e-08!365;UBERON:0004872!6.46e-08!84;UBERON:0001737!1.72e-07!9;UBERON:0000477!8.87e-07!286;UBERON:0004119!9.11e-07!169;UBERON:0000925!9.11e-07!169;UBERON:0006595!9.11e-07!169 | |ontology_enrichment_uberon=UBERON:0000119!2.12e-12!312;UBERON:0003104!3.16e-12!238;UBERON:0009142!3.16e-12!238;UBERON:0000486!5.22e-12!82;UBERON:0000483!6.41e-12!309;UBERON:0000490!9.31e-12!138;UBERON:0005256!2.79e-11!143;UBERON:0002100!5.19e-11!216;UBERON:0002049!6.10e-11!79;UBERON:0007798!6.10e-11!79;UBERON:0001981!1.66e-10!60;UBERON:0007500!1.66e-10!60;UBERON:0004537!1.66e-10!60;UBERON:0006965!1.66e-10!60;UBERON:0003914!2.84e-10!118;UBERON:0000055!2.96e-10!69;UBERON:0000914!5.85e-10!83;UBERON:0002329!5.85e-10!83;UBERON:0003077!5.85e-10!83;UBERON:0003059!5.85e-10!83;UBERON:0007282!5.85e-10!83;UBERON:0009618!5.85e-10!83;UBERON:0007285!5.85e-10!83;UBERON:0004290!5.92e-10!70;UBERON:0002385!6.03e-09!63;UBERON:0001015!6.03e-09!63;UBERON:0000383!6.03e-09!63;UBERON:0001134!8.13e-09!61;UBERON:0002036!8.13e-09!61;UBERON:0003082!8.13e-09!61;UBERON:0001637!4.01e-08!42;UBERON:0003509!4.01e-08!42;UBERON:0004572!4.01e-08!42;UBERON:0000481!4.36e-08!347;UBERON:0000475!5.69e-08!365;UBERON:0004872!6.46e-08!84;UBERON:0001737!1.72e-07!9;UBERON:0000477!8.87e-07!286;UBERON:0004119!9.11e-07!169;UBERON:0000925!9.11e-07!169;UBERON:0006595!9.11e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.31e-07;9!UBERON:0001557;1.31e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.31e-07;9!UBERON:0001557;1.31e-07;9 | ||
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| ||
|short_description=p4@UCK2 | |short_description=p4@UCK2 | ||
}} | }} |
Latest revision as of 10:15, 18 September 2015
Short description: | p4@UCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UCK2_5end |
Coexpression cluster: | C2540_small_neuroblastoma_nonsmall_Urothelial_colon_anaplastic_Smooth |
Association with transcript: | -3bp_to_uc001gdp.2, uc010plb.1_5end |
EntrezGene: | UCK2 |
HGNC: | 12562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.22e-20 | 253 |
embryonic cell | 1.80e-18 | 250 |
mesodermal cell | 1.17e-13 | 121 |
squamous epithelial cell | 2.35e-09 | 63 |
muscle precursor cell | 7.48e-09 | 58 |
myoblast | 7.48e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.48e-09 | 58 |
electrically responsive cell | 3.69e-08 | 61 |
electrically active cell | 3.69e-08 | 61 |
fibroblast | 4.69e-08 | 76 |
muscle cell | 5.41e-08 | 55 |
smooth muscle cell | 8.80e-08 | 43 |
smooth muscle myoblast | 8.80e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.76e-11 | 143 |
disease of cellular proliferation | 9.12e-10 | 239 |
cancer | 9.47e-10 | 235 |
carcinoma | 8.16e-09 | 106 |