FFCP PHASE1:Hg19::chr3:46395509..46395522,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=729230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1603 | |||
|TSSclassifier=strong | |||
|UniProt=E9PH76 | |||
|association_with_transcript=-94bp_to_ENST00000421659_5end | |||
|cluster_id=chr3:46395509..46395522,+ | |||
|coexpression_cluster_id=C4331 | |||
|description=CAGE_peak_5_at_CCR2_5end | |||
|id=chr3:46395509..46395522,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.34e-34!42;CL:0000860!3.26e-31!45;CL:0002194!7.90e-30!63;CL:0000576!7.90e-30!63;CL:0000040!7.90e-30!63;CL:0000559!7.90e-30!63;CL:0000766!5.06e-29!76;CL:0002009!1.20e-28!65;CL:0000763!4.24e-27!112;CL:0000049!4.24e-27!112;CL:0000839!5.46e-26!70;CL:0000557!1.68e-25!71;CL:0000037!2.93e-22!172;CL:0000566!2.93e-22!172;CL:0002087!3.46e-21!119;CL:0000988!2.55e-20!182;CL:0002032!3.52e-20!165;CL:0000837!3.52e-20!165;CL:0000738!4.17e-20!140;CL:0002031!2.70e-16!124;CL:0000767!1.78e-08!3;CL:0000842!1.16e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000576;5.29e-21;48!CL:0000860;2.35e-17;33!CL:0002057;2.35e-17;33!CL:0000473;5.02e-14;39!CL:0000234;5.02e-14;39!CL:0000763;3.32e-11;100!CL:0000766;2.56e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.61e-26,108;CL:0000049,9.61e-26,108;CL:0002194,2.04e-22,59;CL:0000576,2.04e-22,59;CL:0000040,2.04e-22,59;CL:0000559,2.04e-22,59;CL:0002009,1.27e-21,61;CL:0000766,5.29e-21,72;CL:0000839,7.56e-20,66;CL:0000557,1.59e-19,67;CL:0000860,4.35e-19,42;CL:0002057,4.35e-19,42;CL:0000473,1.63e-16,48;CL:0000234,1.63e-16,48;CL:0002032,2.59e-16,161;CL:0000837,2.59e-16,161;CL:0000037,1.66e-15,168;CL:0000988,1.46e-14,177;CL:0002087,1.55e-10,115;CL:0000738,4.50e-10,136;CL:0002031,5.23e-10,120 | |||
|ontology_enrichment_development_v019=CL:0002057;7.68e-13;42!CL:0000049;3.36e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;1.57e-16;31!DOID:1240;1.86e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.58e-17,31;DOID:1240,1.92e-13,39;DOID:2531,4.88e-10,51;DOID:0060083,4.88e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.30e-34!102;UBERON:0003061!7.30e-34!102;UBERON:0002193!3.60e-33!112;UBERON:0002371!1.13e-21!80;UBERON:0001474!1.44e-19!86;UBERON:0002405!3.06e-18!115;UBERON:0004765!2.02e-15!101;UBERON:0001434!2.02e-15!101;UBERON:0000178!5.56e-12!15;UBERON:0000179!5.56e-12!15;UBERON:0000463!5.56e-12!15;UBERON:0003081!1.71e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.45e-20,98;UBERON:0003061,7.45e-20,98;UBERON:0002193,8.76e-18,108;UBERON:0002371,5.48e-17,76;UBERON:0001474,1.33e-15,82;UBERON:0004765,4.90e-14,90;UBERON:0002405,1.62e-13,93;UBERON:0001434,1.99e-12,100;UBERON:0003081,3.27e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,0.619264493264304,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,5.23433659606433,0.377875943688809,1.21292030593908,0.929716147622738,0.411167888021826,0,0.28769239232215,0,0.709446689665756,0.344745680736619,0,0,1.88242339542605,0.272906150057846,0,0,0,0,1.64925650093358,0.997318288108159,1.70489900213078,0.290209238628584,0.56738522469114,0,1.00499466102697,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0.845021145247767,0.637812899895131,1.04829322754188,9.77259090974507,5.10601435661121,3.69668849403284,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.520237390239513,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0.76791966692651,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,2.1440859791201,4.11362273086194,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,3.21176150207399,4.03599414382095,2.12923118845163,1.37402137902306,7.06653757909453,6.26293102098765,6.67396566847634,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.157204305099666,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657887425858975,0.580120991762195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@CCR2 | |||
}} |
Latest revision as of 10:37, 18 September 2015
Short description: | p5@CCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCR2_5end |
Coexpression cluster: | C4331_CD14_acute_Whole_blood_CD4_biphenotypic_CD19 |
Association with transcript: | -94bp_to_ENST00000421659_5end |
EntrezGene: | CCR2 |
HGNC: | 1603 |
UniProt: | E9PH76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.61e-26 | 108 |
common myeloid progenitor | 9.61e-26 | 108 |
monopoietic cell | 2.04e-22 | 59 |
monocyte | 2.04e-22 | 59 |
monoblast | 2.04e-22 | 59 |
promonocyte | 2.04e-22 | 59 |
macrophage dendritic cell progenitor | 1.27e-21 | 61 |
myeloid leukocyte | 5.29e-21 | 72 |
myeloid lineage restricted progenitor cell | 7.56e-20 | 66 |
granulocyte monocyte progenitor cell | 1.59e-19 | 67 |
classical monocyte | 4.35e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.35e-19 | 42 |
defensive cell | 1.63e-16 | 48 |
phagocyte | 1.63e-16 | 48 |
hematopoietic oligopotent progenitor cell | 2.59e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.59e-16 | 161 |
hematopoietic stem cell | 1.66e-15 | 168 |
hematopoietic cell | 1.46e-14 | 177 |
nongranular leukocyte | 1.55e-10 | 115 |
leukocyte | 4.50e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 5.23e-10 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.45e-20 | 98 |
blood island | 7.45e-20 | 98 |
hemolymphoid system | 8.76e-18 | 108 |
bone marrow | 5.48e-17 | 76 |
bone element | 1.33e-15 | 82 |
skeletal element | 4.90e-14 | 90 |
immune system | 1.62e-13 | 93 |
skeletal system | 1.99e-12 | 100 |
lateral plate mesoderm | 3.27e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.58e-17 | 31 |
leukemia | 1.92e-13 | 39 |
hematologic cancer | 4.88e-10 | 51 |
immune system cancer | 4.88e-10 | 51 |