FFCP PHASE1:Hg19::chr1:167487808..167487836,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=919 | |EntrezGene=919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1677 | |HGNC=1677 | ||
|TSSclassifier=strong | |||
|UniProt=P20963 | |UniProt=P20963 | ||
|association_with_transcript=10bp_to_ENST00000392122,ENST00000479979,NM_000734,NM_198053,uc001gei.3,uc001gej.3,uc001gek.2_5end | |association_with_transcript=10bp_to_ENST00000392122,ENST00000479979,NM_000734,NM_198053,uc001gei.3,uc001gej.3,uc001gek.2_5end | ||
|cluster_id=chr1:167487808..167487836,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_2_at_CD247_5end | |description=CAGE_peak_2_at_CD247_5end | ||
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|ontology_enrichment_celltype=CL:0000738!4.07e-34!140;CL:0002087!2.67e-29!119;CL:0000084!3.47e-28!25;CL:0000827!3.47e-28!25;CL:0002031!2.80e-25!124;CL:0000037!6.85e-24!172;CL:0000566!6.85e-24!172;CL:0000791!8.30e-22!18;CL:0000789!8.30e-22!18;CL:0002420!8.30e-22!18;CL:0002419!8.30e-22!18;CL:0000790!8.30e-22!18;CL:0000988!4.66e-21!182;CL:0002032!1.81e-20!165;CL:0000837!1.81e-20!165;CL:0000838!2.83e-18!52;CL:0000542!1.09e-17!53;CL:0000051!1.09e-17!53;CL:0000625!5.46e-14!11;CL:0000766!5.71e-12!76;CL:0002057!1.09e-11!42;CL:0000860!2.43e-10!45;CL:0002194!2.97e-10!63;CL:0000576!2.97e-10!63;CL:0000040!2.97e-10!63;CL:0000559!2.97e-10!63;CL:0002009!1.23e-09!65;CL:0000839!1.89e-09!70;CL:0000557!3.55e-09!71;CL:0000624!2.11e-08!6 | |ontology_enrichment_celltype=CL:0000738!4.07e-34!140;CL:0002087!2.67e-29!119;CL:0000084!3.47e-28!25;CL:0000827!3.47e-28!25;CL:0002031!2.80e-25!124;CL:0000037!6.85e-24!172;CL:0000566!6.85e-24!172;CL:0000791!8.30e-22!18;CL:0000789!8.30e-22!18;CL:0002420!8.30e-22!18;CL:0002419!8.30e-22!18;CL:0000790!8.30e-22!18;CL:0000988!4.66e-21!182;CL:0002032!1.81e-20!165;CL:0000837!1.81e-20!165;CL:0000838!2.83e-18!52;CL:0000542!1.09e-17!53;CL:0000051!1.09e-17!53;CL:0000625!5.46e-14!11;CL:0000766!5.71e-12!76;CL:0002057!1.09e-11!42;CL:0000860!2.43e-10!45;CL:0002194!2.97e-10!63;CL:0000576!2.97e-10!63;CL:0000040!2.97e-10!63;CL:0000559!2.97e-10!63;CL:0002009!1.23e-09!65;CL:0000839!1.89e-09!70;CL:0000557!3.55e-09!71;CL:0000624!2.11e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;9.73e-44;25!CL:0000791;1.36e-33;18!CL:0000789;1.36e-33;18!CL:0002419;1.36e-33;18!CL:0000625;3.35e-21;11!CL:0000542;3.68e-14;53!CL:0000624;2.28e-12;6!CL:0002087;4.57e-08;104!CL:0000623;2.14e-07;3!CL:0000898;6.03e-07;3 | |ontology_enrichment_celltype_v019=CL:0000084;9.73e-44;25!CL:0000791;1.36e-33;18!CL:0000789;1.36e-33;18!CL:0002419;1.36e-33;18!CL:0000625;3.35e-21;11!CL:0000542;3.68e-14;53!CL:0000624;2.28e-12;6!CL:0002087;4.57e-08;104!CL:0000623;2.14e-07;3!CL:0000898;6.03e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,9.50e-44,25;CL:0000827,9.50e-44,25;CL:0000791,1.29e-33,18;CL:0000789,1.29e-33,18;CL:0002420,1.29e-33,18;CL:0002419,1.29e-33,18;CL:0000790,1.29e-33,18;CL:0000838,1.49e-25,52;CL:0000542,6.91e-25,53;CL:0000051,6.91e-25,53;CL:0000738,1.79e-24,136;CL:0002087,2.13e-21,115;CL:0000625,3.27e-21,11;CL:0000037,7.19e-17,168;CL:0002031,1.40e-16,120;CL:0000988,2.96e-15,177;CL:0002032,4.91e-13,161;CL:0000837,4.91e-13,161;CL:0000624,2.24e-12,6;CL:0000623,2.14e-07,3;CL:0000825,2.14e-07,3;CL:0000898,5.93e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.36e-33;18!CL:0000051;3.68e-14;53 | |ontology_enrichment_development_v019=CL:0000790;1.36e-33;18!CL:0000051;3.68e-14;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.37e-24!115;UBERON:0002390!3.13e-16!102;UBERON:0003061!3.13e-16!102;UBERON:0002193!5.69e-15!112;UBERON:0000178!8.45e-10!15;UBERON:0000179!8.45e-10!15;UBERON:0000463!8.45e-10!15;UBERON:0002371!4.59e-07!80;UBERON:0002405!9.20e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!5.37e-24!115;UBERON:0002390!3.13e-16!102;UBERON:0003061!3.13e-16!102;UBERON:0002193!5.69e-15!112;UBERON:0000178!8.45e-10!15;UBERON:0000179!8.45e-10!15;UBERON:0000463!8.45e-10!15;UBERON:0002371!4.59e-07!80;UBERON:0002405!9.20e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.10e-15;15!UBERON:0000179;2.10e-15;15!UBERON:0000463;2.10e-15;15!UBERON:0002390;7.36e-10;32!UBERON:0002193;8.43e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.10e-15;15!UBERON:0000179;2.10e-15;15!UBERON:0000463;2.10e-15;15!UBERON:0002390;7.36e-10;32!UBERON:0002193;8.43e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.13e-15,15;UBERON:0000179,2.13e-15,15;UBERON:0000463,2.13e-15,15;UBERON:0004177,3.06e-09,7;UBERON:0005057,3.06e-09,7;UBERON:0002390,6.54e-09,98;UBERON:0003061,6.54e-09,98;UBERON:0002193,8.25e-09,108;UBERON:0002370,2.98e-08,4;UBERON:0005058,2.98e-08,4;UBERON:0009113,2.98e-08,4;UBERON:0003295,2.98e-08,4;UBERON:0005562,2.98e-08,4;UBERON:0007023,7.51e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.1563348543437,49.5139923545404,27.0928215803133,0,0,0,0,0,0,13.8498852132969,18.450089167253,29.7304892880717,1.79132379391939,7.44955431843653,1.54545340580512,1.16318591023652,0.755751887377619,0.727752183563449,0.697287110717054,0.822335776043652,0.619412741790207,0.863077176966451,0.512321413058201,0.47296445977717,0.344745680736619,0.645484683583826,0,0.752969358170419,0.545812300115692,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0.989553900560148,1.19678194572979,1.27867425159808,1.16083695451434,0.56738522469114,0,1.7587406567972,0,0.434377689410233,1.81619850790011,1.10483290796269,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,1.17447437874188,1.14681968437569,0,14.0127140745384,0,53.1116379307349,71.1349480575988,51.8115777478763,45.3075402508738,68.7695982596876,69.5968274430058,50.6549493860569,49.1320114863615,54.5020928828449,56.9342109079906,43.5994220661675,58.1534591554565,62.9487242189811,47.8514302396698,52.782853397097,36.2253857168816,45.3756883275905,49.2275123685072,47.0409857122396,36.5989176913139,45.6032387386286,56.0112736136687,39.4710719550424,61.1645595502266,55.993177031652,58.9280267557992,48.7863385811984,50.0427649613776,46.224368824368,58.7207585069162,55.8367037906312,49.7968655765089,62.8484460091242,57.640112745354,0,0,0,0,0,0,0,0,0,0,0.43917392846563,1.96468613246569,0,0,0.649094787309367,0.174129737299267,0.664789802594326,1.66943437013739,2.28797964312051,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,20.7487656724886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.9461427414044,81.5707347235979,104.579373806866,142.332427234241,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.36105970945,40.7699839547186,40.8766546387192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8589409885985,0,0,0,0,0,0.422215270595328,0,0,0,0,0.670302275535787,0,1.31801321087491,0,0,0,0,39.5809135201092,30.585488285695,26.7734177971856,28.3495812794769,20.1567513812235,30.4782456260577,31.8618547970488,34.1043825806536,0,0,0,0,0,20.8445601010853,13.0729543637634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.586032717087576,0,28.0837328379245,0,0,0.296964680832639,0,0,0,0,4.12009685566899,0,1.39473591775749,6.07824614168525,0,0,0,0,0,0,0,2.17015492401254,50.2914493928574,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0.533034776018635,10.2193298195736,0,0,0,0.19606253431774,0,0,0,0,0,0,0,1.99052386215701,2.38835424159016,3.05515072466813,0,0,0,0,2.40773294189637,0,0,0,0,0.394584402849391,3.62972148145992,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.872901148395775,0,0,0,0,0.0633107959558787,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,33.1238066391936,0,0.229160424011684,0.717873024576814,0,0.429226048136571,0.669514372325618,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.315222829196793,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0,0,0,0,4.27149650270779,0.943225830597996,7.04206394090232,21.8313049597258,44.4626171770375,0,0,0,0.5013797880454,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,1.19578356282027,0.163565394255844,0,0,0,28.598197607255,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,2.74128883428591,0.992422356778588,0,0,0.535701835878287,0.336283722218824,0,0,0.354809480650555,0,0,0.0679697329768317,0.0657727735628491,0,0,0.706437835654626,0,0,0.913158720509496,0,0,1.07214816264985,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0.718639647993729,0,0,0,0,0,0,0,0,1.77500563648273,3.0598338470554,0,0.980593287015622,0,0,0.594092800654172,0,0,6.10895466869048,7.15482556506707,0,0,0,0,0,0.917458566809082,1.00337708206016,0,0.0679914901909147,0,4.7612415646386,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.310298987585686,1.0661699095049,0.714193294391221,49.6042827540527,43.9488977214674,0,0.509177266225319,1.41482032270754,0.217716747896961,0,11.4498490124799,1.72133292942423,0.332660356546013,0,0,0,0,0,1.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| ||
|short_description=p2@CD247 | |short_description=p2@CD247 | ||
}} | }} |
Latest revision as of 11:13, 18 September 2015
Short description: | p2@CD247 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD247_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 10bp_to_ENST00000392122, ENST00000479979, NM_000734, NM_198053, uc001gei.3, uc001gej.3, uc001gek.2_5end |
EntrezGene: | CD247 |
HGNC: | 1677 |
UniProt: | P20963 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 9.50e-44 | 25 |
pro-T cell | 9.50e-44 | 25 |
mature alpha-beta T cell | 1.29e-33 | 18 |
alpha-beta T cell | 1.29e-33 | 18 |
immature T cell | 1.29e-33 | 18 |
mature T cell | 1.29e-33 | 18 |
immature alpha-beta T cell | 1.29e-33 | 18 |
lymphoid lineage restricted progenitor cell | 1.49e-25 | 52 |
lymphocyte | 6.91e-25 | 53 |
common lymphoid progenitor | 6.91e-25 | 53 |
leukocyte | 1.79e-24 | 136 |
nongranular leukocyte | 2.13e-21 | 115 |
CD8-positive, alpha-beta T cell | 3.27e-21 | 11 |
hematopoietic stem cell | 7.19e-17 | 168 |
hematopoietic lineage restricted progenitor cell | 1.40e-16 | 120 |
hematopoietic cell | 2.96e-15 | 177 |
hematopoietic oligopotent progenitor cell | 4.91e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.91e-13 | 161 |
CD4-positive, alpha-beta T cell | 2.24e-12 | 6 |
natural killer cell | 2.14e-07 | 3 |
pro-NK cell | 2.14e-07 | 3 |
naive T cell | 5.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.13e-15 | 15 |
haemolymphatic fluid | 2.13e-15 | 15 |
organism substance | 2.13e-15 | 15 |
hemopoietic organ | 3.06e-09 | 7 |
immune organ | 3.06e-09 | 7 |
hematopoietic system | 6.54e-09 | 98 |
blood island | 6.54e-09 | 98 |
hemolymphoid system | 8.25e-09 | 108 |
thymus | 2.98e-08 | 4 |
hemolymphoid system gland | 2.98e-08 | 4 |
thymic region | 2.98e-08 | 4 |
pharyngeal gland | 2.98e-08 | 4 |
thymus primordium | 2.98e-08 | 4 |
adult organism | 7.51e-07 | 114 |