FFCP PHASE1:Hg19::chr4:72053017..72053031,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11030 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000351898_5end | |||
|cluster_id=chr4:72053017..72053031,+ | |||
|description=CAGE_peak_11_at_SLC4A4_5end | |||
|id=chr4:72053017..72053031,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.41e-16;1!UBERON:0007123;2.37e-13;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;5.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.31e-31!115;UBERON:0001049!5.29e-27!57;UBERON:0005068!5.29e-27!57;UBERON:0006241!5.29e-27!57;UBERON:0007135!5.29e-27!57;UBERON:0002616!9.96e-24!59;UBERON:0002780!2.99e-21!41;UBERON:0001890!2.99e-21!41;UBERON:0006240!2.99e-21!41;UBERON:0003080!1.63e-20!42;UBERON:0001017!1.79e-20!82;UBERON:0000955!3.07e-20!69;UBERON:0006238!3.07e-20!69;UBERON:0005743!4.96e-20!86;UBERON:0002020!1.11e-19!34;UBERON:0003528!1.11e-19!34;UBERON:0001893!2.81e-19!34;UBERON:0003075!1.33e-18!86;UBERON:0007284!1.33e-18!86;UBERON:0002791!1.81e-18!33;UBERON:0000073!6.21e-18!94;UBERON:0001016!6.21e-18!94;UBERON:0002346!3.80e-17!90;UBERON:0001869!3.93e-17!32;UBERON:0002619!4.40e-14!22;UBERON:0003056!2.78e-12!61;UBERON:0000956!8.12e-12!25;UBERON:0000203!8.12e-12!25;UBERON:0001950!8.98e-12!20;UBERON:0002308!3.94e-10!9;UBERON:0000125!3.94e-10!9;UBERON:0002420!4.76e-10!9;UBERON:0007245!4.76e-10!9;UBERON:0010009!4.76e-10!9;UBERON:0010011!4.76e-10!9;UBERON:0000454!4.76e-10!9;UBERON:0000153!5.86e-10!129;UBERON:0007811!5.86e-10!129;UBERON:0000033!4.31e-09!123;UBERON:0000025!3.65e-08!194;UBERON:0000349!5.69e-08!5;UBERON:0003076!1.19e-07!15;UBERON:0003057!1.19e-07!15;UBERON:0009663!1.59e-07!7;UBERON:0000481!2.10e-07!347;UBERON:0004121!4.79e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.41e-16;1!UBERON:0001874;1.41e-16;1!UBERON:0007195;1.41e-16;1!UBERON:0002046;2.37e-13;5!UBERON:0002298;2.90e-11;6!UBERON:0000341;5.93e-09;2!UBERON:0001897;5.93e-09;2!UBERON:0001954;5.93e-09;2!UBERON:0002148;5.93e-09;2!UBERON:0002081;5.93e-09;2!UBERON:0006331;5.93e-09;2!UBERON:0009662;5.93e-09;2!UBERON:0003022;5.93e-09;2!UBERON:0002421;5.93e-09;2!UBERON:0010225;5.93e-09;2!UBERON:0002600;5.93e-09;2!UBERON:0000125;1.02e-07;9!UBERON:0002308;1.02e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.04e-16,1;UBERON:0001874,1.21e-16,1;UBERON:0007195,2.25e-16,1;UBERON:0002046,3.03e-13,5;UBERON:0004117,3.03e-13,5;UBERON:0007689,3.03e-13,5;UBERON:0007123,3.03e-13,5;UBERON:0003091,3.03e-13,5;UBERON:0002298,3.06e-11,6;UBERON:0007023,4.48e-10,114;UBERON:0003076,7.00e-10,15;UBERON:0003057,7.00e-10,15;UBERON:0001049,1.89e-09,56;UBERON:0005068,1.89e-09,56;UBERON:0006241,1.89e-09,56;UBERON:0007135,1.89e-09,56;UBERON:0001954,4.70e-09,2;UBERON:0003022,4.70e-09,2;UBERON:0002421,4.70e-09,2;UBERON:0002600,4.70e-09,2;UBERON:0002081,5.08e-09,2;UBERON:0010227,5.08e-09,2;UBERON:0000341,5.94e-09,2;UBERON:0002148,6.42e-09,2;UBERON:0006331,6.42e-09,2;UBERON:0009662,6.42e-09,2;UBERON:0001897,8.74e-09,2;UBERON:0010225,8.74e-09,2;UBERON:0010314,1.61e-08,132;UBERON:0000125,1.02e-07,9;UBERON:0002308,1.02e-07,9;UBERON:0000073,4.37e-07,53;UBERON:0002616,4.37e-07,53 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0.337552664482532,0,0.252433774244115,0.276149695926898,0,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,1.14861935834114,0,0,0,0.358121926479791,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0.511707249066704,0.64341568457443,0,0,0,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0.464845549297286,0,0.6970372701606,0,0,0,0,0,0,0,0.38126038784765,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0.63337622438398,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0.371072392647405,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0.723578631752448,0,0.221158519862449,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.442287822516696,0.611030144933625,0,0,0,0.741412462787447,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0.400794101257669,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,0,0.279282401272254,0.687481272035051,0,0.199679000498991,1.71690419254628,0.223171457441873,0.671834724867263,0.360299883542404,0,0,0,0,0.0984274815147488,0,0.795229689809303,1.49823746722733,0,0.137539436597234,0,0,0,0.728994679896296,0,0.157611414598396,0.262272940674991,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0.511164065356265,0,0.146552233678082,0,1.16354660725395,0.92562821219883,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0.612691153526923,0.327872630709804,0,0,0.366078794705889,0.876336514945499,0,2.66229723688445,0.869349641179368,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.530067437837643,0,0,0,0,0,0.553033744606923,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0.552317850755522,0,0.622077260032973,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,0.918736432059601,0.513833800771676,0,0.957803154342908,0,0.252071696221718,0.553258019713743,0,0,0,0,0,0,0.381382095467167,0.690359926060101,0,0.0752103283492573,0.40341013740704,0,0,0.327543835020193,0,0.270150338473579,0,0.620060389503552,0.697573912132975,0.546974809018219,0,0.496211178389294,0,0.127762427639595,0,0,0.606965604236632,0.91064876540519,0,0,0,0.339848664884159,0.460409414939944,0.236387681767936,0,0.078493092850514,1.25692471932802,0,0.913158720509496,0.215927591218621,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,1.57046773691956,0.594092800654172,0,0.509781344063451,0,0,0,0,0,0,0.730336388246517,0,0.573358332605805,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03432995861895,0.426467963801962,1.1903221573187,0.0645889098360061,0,0.33639558774184,1.0820016907288,3.23387502333151,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p11@SLC4A4 | |||
}} |
Latest revision as of 11:48, 18 September 2015
Short description: | p11@SLC4A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC4A4_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000351898_5end |
EntrezGene: | SLC4A4 |
HGNC: | 11030 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.04e-16 | 1 |
putamen | 1.21e-16 | 1 |
stroma of bone marrow | 2.25e-16 | 1 |
thyroid gland | 3.03e-13 | 5 |
pharyngeal pouch | 3.03e-13 | 5 |
thyroid diverticulum | 3.03e-13 | 5 |
pharyngeal pouch 2 | 3.03e-13 | 5 |
thyroid primordium | 3.03e-13 | 5 |
brainstem | 3.06e-11 | 6 |
adult organism | 4.48e-10 | 114 |
posterior neural tube | 7.00e-10 | 15 |
chordal neural plate | 7.00e-10 | 15 |
neural tube | 1.89e-09 | 56 |
neural rod | 1.89e-09 | 56 |
future spinal cord | 1.89e-09 | 56 |
neural keel | 1.89e-09 | 56 |
Ammon's horn | 4.70e-09 | 2 |
lobe parts of cerebral cortex | 4.70e-09 | 2 |
hippocampal formation | 4.70e-09 | 2 |
limbic lobe | 4.70e-09 | 2 |
cardiac atrium | 5.08e-09 | 2 |
future cardiac atrium | 5.08e-09 | 2 |
throat | 5.94e-09 | 2 |
locus ceruleus | 6.42e-09 | 2 |
brainstem nucleus | 6.42e-09 | 2 |
hindbrain nucleus | 6.42e-09 | 2 |
dorsal plus ventral thalamus | 8.74e-09 | 2 |
thalamic complex | 8.74e-09 | 2 |
structure with developmental contribution from neural crest | 1.61e-08 | 132 |
neural nucleus | 1.02e-07 | 9 |
nucleus of brain | 1.02e-07 | 9 |
regional part of nervous system | 4.37e-07 | 53 |
regional part of brain | 4.37e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.02e-09 | 2 |