FFCP PHASE1:Hg19::chr7:37960439..37960448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54749 | |EntrezGene=54749 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17572 | |HGNC=17572 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=179bp_to_ENST00000423717_5end | |association_with_transcript=179bp_to_ENST00000423717_5end | ||
|cluster_id=chr7:37960439..37960448,+ | |||
|coexpression_cluster_id=C2894 | |coexpression_cluster_id=C2894 | ||
|description=CAGE_peak_10_at_EPDR1_5end | |description=CAGE_peak_10_at_EPDR1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!2.37e-07!15 | |ontology_enrichment_celltype=CL:0000136!2.37e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002334;5.80e-13;12!CL:0002579;3.38e-11;3!CL:0002580;2.93e-10;3!CL:0000136;1.29e-08;13!CL:0002617;1.60e-07;2 | |ontology_enrichment_celltype_v019=CL:0002334;5.80e-13;12!CL:0002579;3.38e-11;3!CL:0002580;2.93e-10;3!CL:0000136;1.29e-08;13!CL:0002617;1.60e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,4.86e-13,12;CL:0002579,4.70e-11,3;CL:0002580,1.58e-10,3;CL:0000136,1.96e-07,15;CL:0002617,2.16e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-12!115;UBERON:0003075!2.34e-09!86;UBERON:0007284!2.34e-09!86;UBERON:0002346!2.99e-08!90;UBERON:0001049!2.93e-07!57;UBERON:0005068!2.93e-07!57;UBERON:0006241!2.93e-07!57;UBERON:0007135!2.93e-07!57;UBERON:0002616!4.26e-07!59;UBERON:0005743!8.08e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.07e-12!115;UBERON:0003075!2.34e-09!86;UBERON:0007284!2.34e-09!86;UBERON:0002346!2.99e-08!90;UBERON:0001049!2.93e-07!57;UBERON:0005068!2.93e-07!57;UBERON:0006241!2.93e-07!57;UBERON:0007135!2.93e-07!57;UBERON:0002616!4.26e-07!59;UBERON:0005743!8.08e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.20e-09;9!UBERON:0000042;1.20e-09;9!UBERON:0003688;1.27e-09;6!UBERON:0002358;1.27e-09;6!UBERON:0003684;1.27e-09;6!UBERON:0001178;1.27e-09;6!UBERON:0005406;2.44e-08;2!UBERON:0000310;7.16e-08;10!UBERON:0001443;4.01e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0004457;1.20e-09;9!UBERON:0000042;1.20e-09;9!UBERON:0003688;1.27e-09;6!UBERON:0002358;1.27e-09;6!UBERON:0003684;1.27e-09;6!UBERON:0001178;1.27e-09;6!UBERON:0005406;2.44e-08;2!UBERON:0000310;7.16e-08;10!UBERON:0001443;4.01e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.66e-09,6;UBERON:0002358,1.66e-09,6;UBERON:0003684,1.66e-09,6;UBERON:0001178,1.66e-09,6;UBERON:0005406,2.46e-08,2;UBERON:0000310,6.16e-08,10;UBERON:0001443,3.51e-07,11;UBERON:0004457,4.69e-07,12;UBERON:0000042,4.69e-07,12 | |||
|phase1_expression=2.90685406832891,1.07050261945492,3.10099689011137,0,0.893922188854576,4.36169262050184,0,0.631719873426831,0.261185628199839,1.22866968250754,0,0,0,0,0,0,1.20538905604795,0,0,0.61560529038394,0,0.626909442956176,0,0,0.125542639594803,0.0764134057479513,0.492603536699674,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,1.0843174571537,1.00267582127178,0.144846518960824,0,0,0.378139268656271,0.665188192387692,0.175669571386252,0.392937226493138,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,1.19168262731897,0.573673241497627,1.41867352879343,0,0,1.2333377420858,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0,0,0,0.612975591598039,1.35214253015937,1.13432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0.337169380156203,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,2.88662684050547,0.115930404975077,0.587043471179108,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0.571481048629521,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,0.112131084345361,1.30788020649984,0.2933531432838,0,0,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0.791951872933429,2.41151501647669,0.871533458600294,2.99918973546171,0,0,0,0,0,0,0.579125226670317,0.205476322550383,1.79060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0.500170521059677,0,0.415941723061614,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0,2.48107807818777,1.38115775959256,1.68396056659844,3.97231362692673,2.04682899626681,2.0911009748669,4.45254199334973,0,0.177561725313127,0.0821271560138091,0,0.464841513839837,0,0.40101294060657,0,0.229628896329213,0.364182336013434,1.44236856455367,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0.984043937099117,0,0.103041011647722,0,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0,0.537101224341368,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0.127612712494584,0.10115778085555,0,0,0,0,2.12922412126809,1.73986598415015,0,0.715624433709956,0,0.316379424718726,0.571890581771475,0,0,0.636406495851874,0,0,0.274537029736055,0,2.62837226045311,1.58510321173008,0,0,3.41198885483798,0,0,0,0,0,1.99031692572366,0.876901770507525,0,0,0,0,0,0,0,0.35667105148125,0,3.37772216476263,0.987884678879706,0,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0.318852545457645,0,0.383010740264733,0,0.324621940274555,0,0.684704037099577,0.156679895773023,2.50634477090067,0.338583555603207,0,0,0,0.687010689511529,0,0.223676107892416,0.333698283423817,0.390776190804081,0.278406173895242,0,1.35227839237992,0.33307196799782,1.4098700508785,0,0.293016358543788,0.728163130497081,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0.796991953004279,0,0,0.511343412510774,0.246169610922139,0,0,0,0,0.394573622547734,0,2.22273980289274,0,1.20598527610407,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,1.52581736317083,0.552896299656123,0.295547618953547,0.87754158861589,0,0,0.923403102045565,0.341826167541004,0,0,0,0.638002319463839,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0.313265848516366,0.269604531922708,0,0.937057782901357,0,0,0.242780379534093,0.394584402849391,0,0,0.695052375913368,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0.859930162358083,0.0967563312890851,0.146178634172371,0.328461828212837,0.290967049465258,0.0882561266915003,0.225980740780532,0.274083849293502,0,0.316553979779393,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0.407992870545287,0,0,0,0,1.71906176567983,0,0,0.229160424011684,0.717873024576814,0,0,0.446342914883745,0.0671834724867263,0.360299883542404,0,0.315132729228895,1.2362378757175,1.21326378937533,0.196854963029498,0.169346664131569,0,0.272406812223151,0.160753148465019,0,0,0,0,0.425246896606173,0,0.157611414598396,0.157363764404994,0.105600336519406,0.179287339332845,0,0,0.662091970365432,0,0,0,0.653174720218818,0,0.328370082997356,0.681552087141687,0.79318464064088,0.293104467356165,0,1.0342636508924,0.13223260174269,0.171086837884329,0,0.533937062838473,0.157204305099666,0.414239055347196,0,0.395223263795889,0,0,1.63205341010842,1.5041393641362,0.306345576763462,0.983617892129413,0,0.886068179966986,0.97621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| ||
|short_description=p10@EPDR1 | |short_description=p10@EPDR1 | ||
}} | }} |
Latest revision as of 11:58, 18 September 2015
Short description: | p10@EPDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EPDR1_5end |
Coexpression cluster: | C2894_Preadipocyte_Adipocyte_tenocyte_pons_mesenchymal_Mesothelial_Smooth |
Association with transcript: | 179bp_to_ENST00000423717_5end |
EntrezGene: | EPDR1 |
HGNC: | 17572 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 4.86e-13 | 12 |
omentum preadipocyte | 4.70e-11 | 3 |
preadipocyte of the breast | 1.58e-10 | 3 |
fat cell | 1.96e-07 | 15 |
adipocyte of breast | 2.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.66e-09 | 6 |
peritoneum | 1.66e-09 | 6 |
abdominal cavity | 1.66e-09 | 6 |
visceral peritoneum | 1.66e-09 | 6 |
perirenal fat | 2.46e-08 | 2 |
breast | 6.16e-08 | 10 |
chest | 3.51e-07 | 11 |
cavity lining | 4.69e-07 | 12 |
serous membrane | 4.69e-07 | 12 |