FFCP PHASE1:Hg19::chr15:63449663..63449688,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51065 | |EntrezGene=51065 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18476 | |HGNC=18476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000482846_5end | |association_with_transcript=0bp_to_ENST00000482846_5end | ||
|cluster_id=chr15:63449663..63449688,- | |||
|description=CAGE_peak_1_at_RPS27L_5end | |description=CAGE_peak_1_at_RPS27L_5end | ||
|id=chr15:63449663..63449688,- | |id=chr15:63449663..63449688,- | ||
|ontology_enrichment_celltype=CL:0000134;2.56e-09;55!CL:0000048;8.75e-09;58!CL:0000723;6.20e-08;61!CL:0000077;4.88e-07;19 | |ontology_enrichment_celltype=CL:0000055!1.45e-22!180;CL:0000144!1.46e-22!625;CL:0000222!1.30e-20!119;CL:0000548!1.45e-20!679;CL:0000004!1.45e-20!679;CL:0000255!1.45e-20!679;CL:0000012!6.08e-20!682;CL:0002371!6.90e-18!591;CL:0000003!9.99e-18!722;CL:0000057!6.56e-15!75;CL:0000048!9.09e-13!430;CL:0000723!1.07e-11!436;CL:0000034!4.18e-11!444;CL:0000213!1.20e-10!57;CL:0000215!1.20e-10!57;CL:0000680!2.61e-10!57;CL:0000056!2.61e-10!57;CL:0000355!2.61e-10!57;CL:0000220!4.18e-10!246;CL:0002321!5.93e-10!248;CL:0000183!9.71e-10!59;CL:0000187!1.92e-09!54;CL:0000192!4.20e-09!42;CL:0000514!4.20e-09!42;CL:0000393!8.20e-09!60;CL:0000211!8.20e-09!60;CL:0000063!3.45e-07!578;CL:0000077!4.90e-07!19 | ||
| | |ontology_enrichment_celltype_v019=CL:0000134;2.56e-09;55!CL:0000048;8.75e-09;58!CL:0000723;6.20e-08;61!CL:0000077;4.88e-07;19 | ||
|ontology_enrichment_disease=DOID:2394;2.47e-07;14 | |ontology_enrichment_celltype_v019_2=CL:0000222,2.82e-21,121;CL:0000057,2.23e-15,76;CL:0000048,5.12e-13,427;CL:0000723,6.23e-12,433;CL:0000034,2.49e-11,441;CL:0000213,5.52e-11,58;CL:0000215,5.52e-11,58;CL:0000680,1.42e-10,58;CL:0000056,1.42e-10,58;CL:0000355,1.42e-10,58;CL:0002321,2.18e-10,250;CL:0000187,1.06e-09,55;CL:0000192,2.27e-09,43;CL:0000514,2.27e-09,43;CL:0000393,4.61e-09,61;CL:0000211,4.61e-09,61;CL:0000077,4.90e-07,19 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.49e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.47e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.49e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.09e-10!79;UBERON:0007798!1.09e-10!79;UBERON:0000914!1.67e-10!83;UBERON:0002329!1.67e-10!83;UBERON:0003077!1.67e-10!83;UBERON:0003059!1.67e-10!83;UBERON:0007282!1.67e-10!83;UBERON:0009618!1.67e-10!83;UBERON:0007285!1.67e-10!83;UBERON:0005256!5.09e-10!143;UBERON:0000055!1.71e-09!69;UBERON:0004290!2.27e-09!70;UBERON:0001134!7.90e-09!61;UBERON:0002036!7.90e-09!61;UBERON:0003082!7.90e-09!61;UBERON:0002385!8.47e-09!63;UBERON:0001015!8.47e-09!63;UBERON:0000383!8.47e-09!63;UBERON:0004872!1.26e-08!84;UBERON:0003914!1.76e-08!118;UBERON:0000486!5.99e-08!82;UBERON:0004535!8.14e-08!110;UBERON:0000490!2.03e-07!138;UBERON:0001009!2.35e-07!113;UBERON:0001981!6.85e-07!60;UBERON:0007500!6.85e-07!60;UBERON:0004537!6.85e-07!60;UBERON:0006965!6.85e-07!60 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.49e-10,78;UBERON:0002049,2.74e-10,78;UBERON:0007798,2.74e-10,78;UBERON:0002329,1.28e-09,71;UBERON:0003059,1.28e-09,71;UBERON:0007282,1.28e-09,71;UBERON:0004290,1.28e-09,71;UBERON:0009618,1.28e-09,71;UBERON:0007524,1.96e-09,73;UBERON:0003077,3.95e-09,72;UBERON:0007285,3.95e-09,72;UBERON:0000055,4.27e-09,68;UBERON:0001134,4.44e-09,62;UBERON:0002036,4.44e-09,62;UBERON:0003082,4.44e-09,62;UBERON:0002385,4.78e-09,64;UBERON:0001015,4.78e-09,64;UBERON:0000383,4.78e-09,64;UBERON:0005256,1.11e-08,122;UBERON:0003914,2.86e-08,117;UBERON:0004872,2.89e-08,83;UBERON:0000490,2.91e-08,148;UBERON:0000486,3.56e-08,83;UBERON:0003104,3.67e-08,160;UBERON:0009142,3.67e-08,160;UBERON:0004535,1.68e-07,109;UBERON:0001009,4.72e-07,112 | |||
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| ||
|short_description=p1@RPS27L | |short_description=p1@RPS27L | ||
}} | }} |
Latest revision as of 12:14, 18 September 2015
Short description: | p1@RPS27L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS27L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000482846_5end |
EntrezGene: | RPS27L |
HGNC: | 18476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.82e-21 | 121 |
fibroblast | 2.23e-15 | 76 |
multi fate stem cell | 5.12e-13 | 427 |
somatic stem cell | 6.23e-12 | 433 |
stem cell | 2.49e-11 | 441 |
lining cell | 5.52e-11 | 58 |
barrier cell | 5.52e-11 | 58 |
muscle precursor cell | 1.42e-10 | 58 |
myoblast | 1.42e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.42e-10 | 58 |
embryonic cell | 2.18e-10 | 250 |
muscle cell | 1.06e-09 | 55 |
smooth muscle cell | 2.27e-09 | 43 |
smooth muscle myoblast | 2.27e-09 | 43 |
electrically responsive cell | 4.61e-09 | 61 |
electrically active cell | 4.61e-09 | 61 |
mesothelial cell | 4.90e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.49e-10 | 78 |
vasculature | 2.74e-10 | 78 |
vascular system | 2.74e-10 | 78 |
somite | 1.28e-09 | 71 |
presomitic mesoderm | 1.28e-09 | 71 |
presumptive segmental plate | 1.28e-09 | 71 |
dermomyotome | 1.28e-09 | 71 |
trunk paraxial mesoderm | 1.28e-09 | 71 |
dense mesenchyme tissue | 1.96e-09 | 73 |
paraxial mesoderm | 3.95e-09 | 72 |
presumptive paraxial mesoderm | 3.95e-09 | 72 |
vessel | 4.27e-09 | 68 |
skeletal muscle tissue | 4.44e-09 | 62 |
striated muscle tissue | 4.44e-09 | 62 |
myotome | 4.44e-09 | 62 |
muscle tissue | 4.78e-09 | 64 |
musculature | 4.78e-09 | 64 |
musculature of body | 4.78e-09 | 64 |
trunk mesenchyme | 1.11e-08 | 122 |
epithelial tube | 2.86e-08 | 117 |
splanchnic layer of lateral plate mesoderm | 2.89e-08 | 83 |
unilaminar epithelium | 2.91e-08 | 148 |
multilaminar epithelium | 3.56e-08 | 83 |
mesenchyme | 3.67e-08 | 160 |
entire embryonic mesenchyme | 3.67e-08 | 160 |
cardiovascular system | 1.68e-07 | 109 |
circulatory system | 4.72e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.49e-07 | 14 |