FFCP PHASE1:Hg19::chr16:89768050..89768060,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:89768050..89768060,- to FFCP PHASE1:Hg19::chr16:89768050..89768060,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124044 | |EntrezGene=124044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28393 | |HGNC=28393 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_uc002foj.2,uc002fok.2_5end | |||
|cluster_id=chr16:89768050..89768060,- | |||
|description=CAGE_peak_4_at_SPATA2L_5end | |||
|id=chr16:89768050..89768060,- | |||
|ontology_enrichment_celltype=CL:0000766!5.32e-10!76;CL:0000860!3.94e-09!45;CL:0002057!6.25e-09!42;CL:0000738!2.65e-07!140;CL:0000557!3.06e-07!71;CL:0000839!6.26e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.51e-23;8!CL:0000081;4.26e-17;11!CL:0000097;3.64e-14;5!CL:0000775;1.86e-11;3!CL:0000767;7.64e-11;3!CL:0000163;4.32e-08;9!CL:0000766;4.49e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.42e-23,8;CL:0000081,4.09e-17,11;CL:0000097,1.36e-14,5;CL:0002028,1.36e-14,5;CL:0000766,1.17e-12,72;CL:0000775,1.87e-11,3;CL:0000738,6.12e-11,136;CL:0000767,7.67e-11,3;CL:0000163,2.53e-08,9;CL:0000037,2.68e-08,168;CL:0000763,8.99e-08,108;CL:0000049,8.99e-08,108;CL:0000988,1.00e-07,177;CL:0002032,1.52e-07,161;CL:0000837,1.52e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;9.34e-09;1!DOID:4549;9.34e-09;1!DOID:5861;9.34e-09;1!DOID:6496;9.34e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.22e-08,1;DOID:4549,1.22e-08,1;DOID:5861,1.22e-08,1;DOID:6496,1.22e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@SPATA2L | |||
}} | }} |
Latest revision as of 12:17, 18 September 2015
Short description: | p4@SPATA2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPATA2L_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_uc002foj.2, uc002fok.2_5end |
EntrezGene: | SPATA2L |
HGNC: | 28393 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.42e-23 | 8 |
blood cell | 4.09e-17 | 11 |
mast cell | 1.36e-14 | 5 |
basophil mast progenitor cell | 1.36e-14 | 5 |
myeloid leukocyte | 1.17e-12 | 72 |
neutrophil | 1.87e-11 | 3 |
leukocyte | 6.12e-11 | 136 |
basophil | 7.67e-11 | 3 |
endocrine cell | 2.53e-08 | 9 |
hematopoietic stem cell | 2.68e-08 | 168 |
myeloid cell | 8.99e-08 | 108 |
common myeloid progenitor | 8.99e-08 | 108 |
hematopoietic cell | 1.00e-07 | 177 |
hematopoietic oligopotent progenitor cell | 1.52e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.22e-08 | 1 |
extraosseous chondrosarcoma | 1.22e-08 | 1 |
myxoid chondrosarcoma | 1.22e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 1.22e-08 | 1 |