FFCP PHASE2:Hg19::chr21:42539751..42539762,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:25825 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:934 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=25825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=934 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9Y5Z0 | ||
|association_with_transcript=23bp_to_ENST00000328735,ENST00000330333,ENST00000347667,NM_012105,NM_138991,NM_138992,uc002yyw.2,uc002yyx.2,uc002yyy.2_5end | |association_with_transcript=23bp_to_ENST00000328735,ENST00000330333,ENST00000347667,NM_012105,NM_138991,NM_138992,uc002yyw.2,uc002yyx.2,uc002yyy.2_5end | ||
|cluster_id=chr21:42539751..42539762,+ | |cluster_id=chr21:42539751..42539762,+ | ||
Latest revision as of 12:19, 18 September 2015
| Short description: | p5@BACE2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_BACE2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 23bp_to_ENST00000328735, ENST00000330333, ENST00000347667, NM_012105, NM_138991, NM_138992, uc002yyw.2, uc002yyx.2, uc002yyy.2_5end |
| EntrezGene: | BACE2 |
| HGNC: | 934 |
| UniProt: | Q9Y5Z0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@BACE2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell of vascular tree | 2.55e-25 | 24 |
| endothelial cell | 1.93e-24 | 36 |
| meso-epithelial cell | 1.16e-23 | 45 |
| lining cell | 1.40e-19 | 58 |
| barrier cell | 1.40e-19 | 58 |
| blood vessel endothelial cell | 9.87e-19 | 18 |
| embryonic blood vessel endothelial progenitor cell | 9.87e-19 | 18 |
| mesodermal cell | 3.77e-18 | 121 |
| endothelial cell of artery | 7.34e-11 | 9 |
| embryonic cell | 7.61e-09 | 250 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| splanchnic layer of lateral plate mesoderm | 2.24e-21 | 83 |
| vessel | 4.73e-21 | 68 |
| vasculature | 3.06e-20 | 78 |
| vascular system | 3.06e-20 | 78 |
| epithelial tube | 1.11e-19 | 117 |
| cardiovascular system | 1.35e-19 | 109 |
| circulatory system | 2.27e-19 | 112 |
| blood vessel endothelium | 9.87e-19 | 18 |
| endothelium | 9.87e-19 | 18 |
| cardiovascular system endothelium | 9.87e-19 | 18 |
Showing 1 to 10 of 31 entries
